EY728801

Overview
NameEY728801
Unique NameEY728801
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length883
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728801 vs. ExPASy Swiss-Prot
Match: EF1A_SULTO (Elongation factor 1-alpha OS=Sulfolobus tokodaii GN=tuf PE=3 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 1.051e-61
Identity = 102/192 (53.12%), Postives = 142/192 (73.96%), Query Frame = 1
Query:   16 KRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVY 591
            K S KYA++LD+LK ERERG+TI++   +FET K++ T+IDAPGHRDF+KNMITG SQAD A+L++ +  G +EAG+S +GQTREH +LA T+G+ Q+I   NKMD T P Y + R+ EIV +V  ++K  G++  KV FVP+    G+N+ +RS N+ WY GPTL + LD +  P +P DKPLR+P+Q+VY
Sbjct:   50 KESEKYAFLLDRLKEERERGVTINLTFMRFETKKFFFTIIDAPGHRDFVKNMITGASQADAAILVVSAKKGEYEAGMSAEGQTREHIILAKTMGINQVIVAVNKMDLTDPPYDEKRFKEIVDQVGKFMKSFGFDMNKVKFVPVVAPTGENITQRSENMKWYTGPTLEEYLDQLEIPPKPVDKPLRIPIQEVY 241          

HSP 2 Score: 31.9574 bits (71), Expect = 1.051e-61
Identity = 14/20 (70.00%), Postives = 16/20 (80.00%), Query Frame = 2
Query:  596 IGGIGTVPVGRVETGVPQPG 655
            I G+G VPVGRVETGV + G
Sbjct:  243 ISGVGVVPVGRVETGVLKVG 262          
BLAST of EY728801 vs. ExPASy Swiss-Prot
Match: EF1A_THEVO (Elongation factor 1-alpha OS=Thermoplasma volcanium GN=tuf PE=3 SV=2)

HSP 1 Score: 221.476 bits (563), Expect = 1.370e-61
Identity = 107/194 (55.15%), Postives = 144/194 (74.23%), Query Frame = 1
Query:   10 RNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVY 591
            + K +F++AWV+D+ K ERERG+TID+A  KFET KYY T+IDAPGHRDF+KNMITGTSQAD A+L+I +  G    G+ +  QTREHA LA TLGV Q++   NKMDAT P +S+ R++E+  +    LK +GY  +   FVPISG++GDN+ + S N+ WYKGP+LL ALD    P++P +KPLR+P++DVY
Sbjct:   49 KGKATFEFAWVMDRFKEERERGVTIDLAHRKFETDKYYFTLIDAPGHRDFVKNMITGTSQADAAILVISAREG---EGVME--QTREHAFLARTLGVPQIVVAINKMDATEPPFSEKRFNEVKADAEKLLKTIGY--KDATFVPISGYKGDNVTKPSPNMPWYKGPSLLQALDAFKVPEKPINKPLRVPVEDVY 235          

HSP 2 Score: 36.965 bits (84), Expect = 1.370e-61
Identity = 17/20 (85.00%), Postives = 18/20 (90.00%), Query Frame = 2
Query:  596 IGGIGTVPVGRVETGVPQPG 655
            I GIGTVPVGRVETGV +PG
Sbjct:  237 ITGIGTVPVGRVETGVLKPG 256          
BLAST of EY728801 vs. ExPASy Swiss-Prot
Match: EF1A_PICTO (Elongation factor 1-alpha OS=Picrophilus torridus GN=tuf PE=3 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 1.787e-61
Identity = 106/194 (54.64%), Postives = 146/194 (75.26%), Query Frame = 1
Query:   10 RNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVY 591
            + K +F++AWV+D+ K ERERG+TID+   KFET KYY T+IDAPGHRDF+KNMITGTSQAD AVL++ +  G    G+    QT+EHA LA TLGV Q+I   NKMDAT P YS+ R++E+  E++  L  +G+  + VP +P+SG++GDN+++ S NL W+KGPTL++AL+ +  P +P DKPLRLP++DVY
Sbjct:   49 KGKATFEFAWVMDRFKEERERGVTIDLTHRKFETDKYYFTIIDAPGHRDFVKNMITGTSQADAAVLVVSAREG---EGVM--AQTKEHAFLARTLGVPQLIAVVNKMDATQPPYSEKRFNEVKDEITKLLTPIGF--KNVPIIPLSGYKGDNIMKPSPNLSWWKGPTLMEALNALQVPAKPVDKPLRLPVEDVY 235          

HSP 2 Score: 33.4982 bits (75), Expect = 1.787e-61
Identity = 15/20 (75.00%), Postives = 17/20 (85.00%), Query Frame = 2
Query:  596 IGGIGTVPVGRVETGVPQPG 655
            I GIGTVPVGR+ETGV + G
Sbjct:  237 ITGIGTVPVGRIETGVMKVG 256          
BLAST of EY728801 vs. ExPASy Swiss-Prot
Match: EF1A_METS5 (Elongation factor 1-alpha OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=tuf PE=3 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 2.329e-61
Identity = 102/192 (53.12%), Postives = 140/192 (72.92%), Query Frame = 1
Query:   16 KRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVY 591
            K S KYA++LD+LK ERERG+TI++   +FET KY+ T+IDAPGHRDF+KNMITG SQAD A+L + +  G FE+G+S +GQTREH +LA T+G+ Q+I    KMD   P Y + RY+EI + +  ++K  G++  KV F+PI    G+N+ +RS N+ WY GPTL +ALD +  P +P DKPLRLP+Q+VY
Sbjct:   50 KESEKYAFLLDRLKEERERGVTINLTFMRFETKKYFFTIIDAPGHRDFVKNMITGASQADAAILAVSARKGEFESGMSLEGQTREHIILAKTMGLNQVIVAITKMDVAEPPYDQKRYNEIKETIEKFMKSFGFDMSKVKFIPIVSITGENVTKRSENMKWYNGPTLEEALDMLEIPPKPVDKPLRLPIQEVY 241          

HSP 2 Score: 32.7278 bits (73), Expect = 2.329e-61
Identity = 14/20 (70.00%), Postives = 17/20 (85.00%), Query Frame = 2
Query:  596 IGGIGTVPVGRVETGVPQPG 655
            I G+GTVPVGRVE+GV + G
Sbjct:  243 ISGVGTVPVGRVESGVMKVG 262          
BLAST of EY728801 vs. ExPASy Swiss-Prot
Match: EF1A_SULAC (Elongation factor 1-alpha OS=Sulfolobus acidocaldarius GN=tuf PE=3 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 4.312e-60
Identity = 101/192 (52.60%), Postives = 141/192 (73.44%), Query Frame = 1
Query:   16 KRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVY 591
            K S KYA+++D+LK ERERG+TI+++  +FET KY+ TVIDAPGHRDF+KNMITG SQAD A+L++ +  G +EAG+S +GQTREH +L+ T+G+ Q+I   NKMD     Y + R+ EIV  VS ++K  G++  KV FVP+   +GDN+  +ST + WY GPTL + LD +  P +P DKPLR+P+Q+VY
Sbjct:   50 KDSEKYAFLMDRLKEERERGVTINLSFMRFETRKYFFTVIDAPGHRDFVKNMITGASQADAAILVVSAKKGEYEAGMSAEGQTREHIILSKTMGINQVIVAINKMDLADTPYDEKRFKEIVDTVSKFMKSFGFDMNKVKFVPVVAPDGDNVTHKSTKMPWYNGPTLEELLDQLEIPPKPVDKPLRIPIQEVY 241          

HSP 2 Score: 30.0314 bits (66), Expect = 4.312e-60
Identity = 12/20 (60.00%), Postives = 16/20 (80.00%), Query Frame = 2
Query:  596 IGGIGTVPVGRVETGVPQPG 655
            I G+G VPVGR+E+GV + G
Sbjct:  243 ISGVGVVPVGRIESGVLKVG 262          
BLAST of EY728801 vs. ExPASy Swiss-Prot
Match: EF1A_METB6 (Elongation factor 1-alpha OS=Methanoregula boonei (strain 6A8) GN=tuf PE=3 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 9.560e-60
Identity = 104/194 (53.61%), Postives = 135/194 (69.59%), Query Frame = 1
Query:   10 RNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVY 591
            + K +F++AWV+D LK ERERGITIDIA  +F+T KYY TV+D PGHRDF+KNMITG SQAD A+L++ +  G  E       QT+EH  LA TLG+ Q+I   NKMDA   K+ + R++E+ KE+S  +K VGY PE+  F+PIS  +G N+   S    WYKGP L+ ALD   EP +P+DKPLRLP+QD Y
Sbjct:   49 KGKATFEFAWVMDNLKEERERGITIDIAHKRFDTPKYYFTVVDCPGHRDFVKNMITGASQADAAILVVAAPDGVME-------QTKEHVFLARTLGITQIIIAINKMDAV--KFDEKRFNEVKKELSDLIKMVGYKPEETLFIPISSLQGINIKANSPETPWYKGPALIPALDTFKEPSKPTDKPLRLPIQDSY 233          

HSP 2 Score: 36.965 bits (84), Expect = 9.560e-60
Identity = 17/27 (62.96%), Postives = 19/27 (70.37%), Query Frame = 2
Query:  596 IGGIGTVPVGRVETGVPQPGMGGDIWP 676
            I GIGTVPVGRVETG+ + GM     P
Sbjct:  235 ISGIGTVPVGRVETGIMKKGMKVSFMP 261          
BLAST of EY728801 vs. ExPASy Swiss-Prot
Match: EF1A_METKA (Elongation factor 1-alpha OS=Methanopyrus kandleri GN=tuf PE=3 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 3.602e-59
Identity = 101/188 (53.72%), Postives = 137/188 (72.87%), Query Frame = 1
Query:   28 KYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVY 591
            K+  ++D L+ ERERG+TID+A  KFET  Y  T++D PGHRDF+KNMITG SQAD A+L++ +  G          QT+EHA LA TLG+ Q+I   NKMD     Y + RY+E+ +EV+  LK +GYN +++PF+PIS FEGDN++E+S N  WY GPTLL+ALDN+  P++P+DKPLR+P+QDVY
Sbjct:   45 KFRVIMDTLEEERERGVTIDLAHTKFETDNYEFTIVDCPGHRDFVKNMITGASQADAAILVVAADDGVMP-------QTKEHAFLAKTLGIDQLIVAINKMDLVD--YDENRYEEVKQEVAELLKTIGYNVDEIPFIPISAFEGDNVVEKSDNTPWYDGPTLLEALDNLEPPEKPTDKPLRIPIQDVY 223          

HSP 2 Score: 33.4982 bits (75), Expect = 3.602e-59
Identity = 15/20 (75.00%), Postives = 17/20 (85.00%), Query Frame = 2
Query:  596 IGGIGTVPVGRVETGVPQPG 655
            I G+GTVPVGRVETGV + G
Sbjct:  225 ITGVGTVPVGRVETGVLEVG 244          
BLAST of EY728801 vs. ExPASy Swiss-Prot
Match: EF1A_CALMQ (Elongation factor 1-alpha OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=tuf PE=3 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 4.694e-59
Identity = 104/192 (54.17%), Postives = 137/192 (71.35%), Query Frame = 1
Query:   16 KRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVY 591
            K  FKYAW++D+LK ERERG+TI+     FET KY+ T+ID PGHRDF+KNMI G SQAD A+L++ +  G FE+G+   GQTREH  LA+TLG++ +I   NKMD     Y + RY++I  E+S  LK + Y+  KVPF+P+S   GDN+  +S+N+ WY GP LL+ALD I  P RP DKPLRLP+QDV+
Sbjct:   60 KEDFKYAWIMDRLKEERERGVTIEAMHVGFETPKYFFTIIDLPGHRDFVKNMIVGASQADAALLVVSARPGEFESGVGPQGQTREHLFLAWTLGIRNLIVAVNKMDVV--NYDQKRYEQIKGELSKILKILRYDVNKVPFIPVSAVRGDNIKVKSSNMPWYNGPVLLEALDAIEPPPRPIDKPLRLPIQDVF 249          

HSP 2 Score: 25.0238 bits (53), Expect = 4.694e-59
Identity = 12/20 (60.00%), Postives = 14/20 (70.00%), Query Frame = 2
Query:  596 IGGIGTVPVGRVETGVPQPG 655
            I G GTV  GRVE+GV + G
Sbjct:  251 ITGAGTVITGRVESGVVKVG 270          
BLAST of EY728801 vs. ExPASy Swiss-Prot
Match: EF1A_METLZ (Elongation factor 1-alpha OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=tuf PE=3 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 4.696e-59
Identity = 106/194 (54.64%), Postives = 134/194 (69.07%), Query Frame = 1
Query:   10 RNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVY 591
            + K +F++AWV+D LK ERERGITIDIA  KFET KY  TV+D PGHRDF+KNMITG SQAD A++++  T G  E       QT+EH  L+ TLG+ Q+I   NKMDA    YS+ +Y+E   +++  +  VG+ P + PF+PIS F GDN+ E S N  WYKGPTLL ALD    P  P+DKPLRLP+QDVY
Sbjct:   49 KGKATFEFAWVMDSLKEERERGITIDIAHKKFETPKYNFTVVDCPGHRDFVKNMITGASQADAAIIVVSGTEGPME-------QTKEHVFLSKTLGINQIIVAINKMDAV--NYSEEKYNEAKDKMTKLIMSVGFKPAETPFIPISAFCGDNIKEASANTPWYKGPTLLAALDLFKMPDMPTDKPLRLPIQDVY 233          

HSP 2 Score: 33.8834 bits (76), Expect = 4.696e-59
Identity = 14/20 (70.00%), Postives = 17/20 (85.00%), Query Frame = 2
Query:  596 IGGIGTVPVGRVETGVPQPG 655
            I G+GTVPVGRVETG+ + G
Sbjct:  235 ISGVGTVPVGRVETGILKKG 254          
BLAST of EY728801 vs. ExPASy Swiss-Prot
Match: EF1A_THESM (Elongation factor 1-alpha OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=tuf PE=3 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 6.122e-59
Identity = 106/191 (55.50%), Postives = 140/191 (73.30%), Query Frame = 1
Query:   19 RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVY 591
            +SFK+AWV+D+LK ERERGITID+A  KFET   Y T+IDAPGHRDF+KNMITG SQAD AVLI+ +T G          QT+EHA LA TLG+  +I   NKMDA   KY + R+ E+  +V+  L+ +GY  +  P +PIS +EGDN++++S  + WY GPTL++ALD I EP++P+DKPLR+P+QDVY
Sbjct:   50 KSFKFAWVMDRLKEERERGITIDVAHTKFETPHRYITIIDAPGHRDFVKNMITGASQADAAVLIVAATDGVMP-------QTKEHAFLARTLGINHIIVGVNKMDAV--KYDEKRFKEVATQVTKLLQMLGY--KNFPVIPISAWEGDNVVKKSDKMPWYNGPTLIEALDQIPEPEKPTDKPLRIPIQDVY 229          

HSP 2 Score: 33.113 bits (74), Expect = 6.122e-59
Identity = 15/20 (75.00%), Postives = 17/20 (85.00%), Query Frame = 2
Query:  596 IGGIGTVPVGRVETGVPQPG 655
            I G+GTVPVGRVETGV + G
Sbjct:  231 IKGVGTVPVGRVETGVLKVG 250          
The following BLAST results are available for this feature:
BLAST of EY728801 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EF1A_SULTO1.051e-6153.13Elongation factor 1-alpha OS=Sulfolobus tokodaii G... [more]
EF1A_THEVO1.370e-6155.15Elongation factor 1-alpha OS=Thermoplasma volcaniu... [more]
EF1A_PICTO1.787e-6154.64Elongation factor 1-alpha OS=Picrophilus torridus ... [more]
EF1A_METS52.329e-6153.13Elongation factor 1-alpha OS=Metallosphaera sedula... [more]
EF1A_SULAC4.312e-6052.60Elongation factor 1-alpha OS=Sulfolobus acidocalda... [more]
EF1A_METB69.560e-6053.61Elongation factor 1-alpha OS=Methanoregula boonei ... [more]
EF1A_METKA3.602e-5953.72Elongation factor 1-alpha OS=Methanopyrus kandleri... [more]
EF1A_CALMQ4.694e-5954.17Elongation factor 1-alpha OS=Caldivirga maquilinge... [more]
EF1A_METLZ4.696e-5954.64Elongation factor 1-alpha OS=Methanocorpusculum la... [more]
EF1A_THESM6.122e-5955.50Elongation factor 1-alpha OS=Thermococcus sibiricu... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-008-G06-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728801 ID=EY728801; Name=EY728801; organism=Citrus sinensis; type=EST; length=883bp
CCACGCGTCCGGAACAAGAGGTCATTCAAGTACGCCTGGGTGCTCGACAA
GCTCAAGGCTGAGCGTGAACGTGGTATTACCATTGATATTGCCTTGTGGA
AGTTCGAGACCACCAAGTACTACTGCACCGTCATTGATGCTCCCGGACAT
CGTGACTTTATCAAGAACATGATTACCGGTACCTCACAGGCTGACTGTGC
CGTCCTTATCATTGACTCCACCACCGGTGGTTTTGAAGCTGGTATCTCCA
AGGATGGTCAGACTCGTGAGCATGCTTTGCTTGCTTTCACCCTTGGTGTG
AAGCAGATGATTTGCTGCTGTAACAAGATGGACGCCACCACCCCCAAGTA
CTCAAAGGCTAGGTACGATGAAATTGTGAAGGAGGTCTCTTCCTACCTGA
AGAAGGTTGGATACAACCCCGAGAAAGTCCCATTCGTGCCCATCTCTGGT
TTCGAGGGTGACAACATGATTGAGAGGTCTACCAACCTTGACTGGTACAA
GGGTCCAACCCTGCTGGACGCTCTTGACAATATCAATGAGCCAAAGAGGC
CCTCAGACAAGCCCCTTCGTCTGCCACTCCAGGACGTGTACAAGAATTGG
TGGCATTGGAACCGTCCCAGTGGGTCGCGTTGAGACCGGTGTCCCTCAGC
CTGGTATGGGTGGTGACATTTGGCCCCTCTGGATTGACNACTGANGGTTA
GTCTGTTGAGATGCACACGAAGCTCTGCANGAGGCCTTCCGGGTGACAAT
GTTGGCTTCACGTGAAAACGTTGCTGTCAAGGATCTCANCGTGGGTTTGT
TGCTTCAACTCCAAGGATGATCCGGCAAGGGAACCTGCACTTCCCTCACA
GGTCATATCATGAACACCCTGGCCGATGGAAAT
back to top