EY728793

Overview
NameEY728793
Unique NameEY728793
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length849
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY728793_ssr736 microsatellite EY728793_ssr736:736..747. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY728793 vs. ExPASy Swiss-Prot
Match: C71BL_ARATH (Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=CYP71B21 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.835e-17
Identity = 47/130 (36.15%), Postives = 71/130 (54.62%), Query Frame = 3
Query:  237 PVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLSMFEKAR*RLV*RSYMSFGNVRTL 626
            P+IG+LH LG+  LHR    ++ +YGP+  +R GV   +V S  E A+E L THD    +RPK     +  +NF   GF+ YG  WR++RK+A LEL S+ +L+      +    L+ +        +TL
Sbjct:   36 PIIGNLHQLGK-SLHRSFYKLSQEYGPVMFLRFGVVPVVVFSTKEAAEEVLKTHDLETCTRPKLSATGLFTYNFKDIGFAQYGEDWREMRKLAMLELFSSKKLKAFRYIREEESELLVKKVTESAQTQTL 164          
BLAST of EY728793 vs. ExPASy Swiss-Prot
Match: C71C1_MAIZE (Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.703e-17
Identity = 48/114 (42.11%), Postives = 67/114 (58.77%), Query Frame = 3
Query:  198 KKKRGPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGP--IFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLS 533
            K+ R PP   G  P+IGHLHL+G  P H    D+  KYG   +  +++G    +VVS  + A+  L THD V ASRP+  VA+I+ +N +   F+PYG +WR  RK+    LLS
Sbjct:   51 KQHRLPPTPPGKLPIIGHLHLIGSHP-HVSFRDLHAKYGHNGLMLVQVGAVPTIVVSTPQAAEAVLRTHDHVLASRPRNPVADIIRYNSTDVAFAPYGVYWRTARKVVNTHLLS 163          
BLAST of EY728793 vs. ExPASy Swiss-Prot
Match: C81D1_ARATH (Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CYP81D1 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.836e-17
Identity = 46/130 (35.38%), Postives = 77/130 (59.23%), Query Frame = 3
Query:  174 VSRNYASNKKKRGPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKY-----GPIFTIRMGVHRALVVSNWEMA-KECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRL 545
            +S  +   KK+  PP   G  P+IGHL LL + P+HR L   ++       G + ++R+G     VVS+ ++A +EC   +D V A+RP+ ++ + +G+N +    +PYG HWR +R++ T+E+ S HRL
Sbjct:   21 ISFKFLKPKKQNLPPSPPGWLPIIGHLRLL-KPPIHRTLRSFSETLDHNDGGGVMSLRLGSRLVYVVSSHKVAAEECFGKNDVVLANRPQVIIGKHVGYNNTNMIAAPYGDHWRNLRRLCTIEIFSTHRL 149          
BLAST of EY728793 vs. ExPASy Swiss-Prot
Match: C71D8_SOYBN (Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.836e-17
Identity = 51/131 (38.93%), Postives = 73/131 (55.73%), Query Frame = 3
Query:  180 RNYASNKKKRGPPEAGGAW--PVIGHLH---LLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLS 557
            + Y      + PP   G W  P+IG+LH   L    P  + L  +  KYGP+  +++G    LVVS+ +MA E + THD  F  RP+ L  + + +  +   F+PYG +WRQIRKI TLELLS  R++  S
Sbjct:   23 KTYKQKSSHKLPP---GPWRLPIIGNLHQLALAASLP-DQALQKLVRKYGPLMHLQLGEISTLVVSSPKMAMEMMKTHDVHFVQRPQLLAPQFMVYGATDIAFAPYGDYWRQIRKICTLELLSAKRVQSFS 149          
BLAST of EY728793 vs. ExPASy Swiss-Prot
Match: C71A6_NEPRA (Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa GN=CYP71A6 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.316e-17
Identity = 47/123 (38.21%), Postives = 70/123 (56.91%), Query Frame = 3
Query:  180 RNYASNKKKRGPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLE 548
            R+Y+       PP+     PV+G+LH LG FP HR L  ++ +YGP+  +  G    LV S+ E A+E +   D  F++RP   +   L ++     F+PYG +WRQIR I  L+LLSN R++
Sbjct:   20 RSYSGKTPPPSPPKL----PVLGNLHQLGTFP-HRSLQSLSRRYGPVMQLHFGSVPVLVASSPEAAREIMKNQDLNFSNRPNLSIPRRLLYDNHDVAFAPYGEYWRQIRSICVLQLLSNKRVQ 137          
BLAST of EY728793 vs. ExPASy Swiss-Prot
Match: C93A3_SOYBN (Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.249e-17
Identity = 49/120 (40.83%), Postives = 70/120 (58.33%), Query Frame = 3
Query:  195 NKKKRGPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVA-EILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEK 551
            NK K   P +    P+IGHLHLL   P H+    ++ +YGPI  + +G    +V S  E AKE L TH+  F++RP   VA E L + F  F F+PYGP+W+ ++K+   ELL  H L++
Sbjct:   25 NKNKTLLPPSPMPLPIIGHLHLLSPTP-HQDFHKLSLRYGPIIHLFLGSVPCVVASTAEAAKEFLKTHEPAFSNRPANTVAVETLTYGFQDFLFAPYGPYWKFMKKLCMSELLGGHMLDQ 143          
BLAST of EY728793 vs. ExPASy Swiss-Prot
Match: C71BV_ARATH (Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=CYP71B34 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.077e-16
Identity = 47/125 (37.60%), Postives = 72/125 (57.60%), Query Frame = 3
Query:  180 RNYASNKKKRGPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKL 554
            RNY     +R PP   G  P+IG+LH LG  P H+ L  ++ KYGP+  +++G    ++VS+ E AK+ L  HD    SRP    A  L +N+    FSPY  +W+++RK+A  EL S+ ++  +
Sbjct:   26 RNY-----QRTPPSPPGC-PIIGNLHQLGELP-HQSLWKLSKKYGPVMLLKLGRVPTVIVSSSETAKQALKIHDLHCCSRPGFAGARELSYNYLDIAFSPYDDYWKEVRKLAVQELFSSKQVHSI 143          
BLAST of EY728793 vs. ExPASy Swiss-Prot
Match: F3PH_PETHY (Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=CYP75B2 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.234e-16
Identity = 46/119 (38.66%), Postives = 67/119 (56.30%), Query Frame = 3
Query:  201 KKRGP---PEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLE 548
            +KR P   P     WP+IG+L  LG  P H+    MA  YGP+  ++MG    +V ++  +A + L THD  F+SRP    AE + +N+    F+PYGP WR +RKI ++ L S   L+
Sbjct:   26 RKRYPLPLPPGPKPWPIIGNLVHLGPKP-HQSTAAMAQTYGPLMYLKMGFVDVVVAASASVAAQFLKTHDANFSSRPPNSGAEHMAYNYQDLVFAPYGPRWRMLRKICSVHLFSTKALD 143          

HSP 2 Score: 20.4014 bits (41), Expect = 1.234e-16
Identity = 8/15 (53.33%), Postives = 11/15 (73.33%), Query Frame = 2
Query:  554 QHVREGEVKTCLKEL 598
            +HVR+ EVKT  + L
Sbjct:  146 RHVRQDEVKTLTRAL 160          
BLAST of EY728793 vs. ExPASy Swiss-Prot
Match: C71BN_ARATH (Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=CYP71B23 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.838e-16
Identity = 49/135 (36.30%), Postives = 79/135 (58.52%), Query Frame = 3
Query:  177 SRNYASNKKKR--GPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLSMFEKAR 575
            +R   S+K K   GPP+     P+IG+LH L   P H+ L ++   +GP+  +++G    +V+S+ + A+E L THD    SRP+ + ++ + +NF   GF+PYG  WR +RK+A +EL S   L+K + F   R
Sbjct:   21 TRKSQSSKLKLPPGPPKL----PIIGNLHYLNGLP-HKCLLNLWKIHGPVMQLQLGYVPLVVISSNQAAEEVLKTHDLDCCSRPETIASKTISYNFKDIGFAPYGEEWRALRKLAVIELFS---LKKFNSFRYIR 147          
BLAST of EY728793 vs. ExPASy Swiss-Prot
Match: C75A6_CAMME (Flavonoid 3',5'-hydroxylase OS=Campanula medium GN=CYP75A6 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.708e-16
Identity = 47/112 (41.96%), Postives = 63/112 (56.25%), Query Frame = 3
Query:  213 PPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLE 548
            PP   G WP+IG L LLG  P H  L DMA KYGPI  +++G    +V SN + A+  L THD  F++RP       L +N     F+ YGP W+ +RK+ +L +L    LE
Sbjct:   39 PPGPTG-WPIIGALPLLGTMP-HVSLADMAVKYGPIMYLKLGSKGTVVASNPKAARAFLKTHDANFSNRPIDGGPTYLAYNAQDMVFAEYGPKWKLLRKLCSLHMLGPKALE 148          

HSP 2 Score: 21.557 bits (44), Expect = 2.708e-16
Identity = 9/16 (56.25%), Postives = 11/16 (68.75%), Query Frame = 2
Query:  557 HVREGEVKTCLKELYE 604
            HV+  EV   LKE+YE
Sbjct:  152 HVKVSEVGHMLKEMYE 167          
The following BLAST results are available for this feature:
BLAST of EY728793 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
C71BL_ARATH2.835e-1736.15Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=C... [more]
C71C1_MAIZE3.703e-1742.11Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 S... [more]
C81D1_ARATH4.836e-1735.38Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CY... [more]
C71D8_SOYBN4.836e-1738.93Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=... [more]
C71A6_NEPRA6.316e-1738.21Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa... [more]
C93A3_SOYBN8.249e-1740.83Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=... [more]
C71BV_ARATH1.077e-1637.60Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=C... [more]
F3PH_PETHY1.234e-1638.66Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=C... [more]
C71BN_ARATH1.838e-1636.30Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=C... [more]
C75A6_CAMME2.708e-1641.96Flavonoid 3',5'-hydroxylase OS=Campanula medium GN... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-008-F09-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728793 ID=EY728793; Name=EY728793; organism=Citrus sinensis; type=EST; length=849bp
CACGCGTCCGTATTTATCTCCTCTATTTGTCTTGAATGTGCATGCATATT
ATATTAAGCTCAACCACTCAGGCTTAGAAGGAAGCAGCGGCGATGGCCTT
TTTTGCATCCCAAACAAGTGCTGTAGCTGCGATTTTAACCCTTATAATCT
TTCTATACACTTTGTTGTTGTTTGTTTCAAGAAATTACGCAAGCAATAAG
AAGAAGAGAGGACCTCCAGAAGCTGGTGGAGCATGGCCTGTGATTGGGCA
TCTACACCTCTTGGGAAGGTTCCCCCTTCACAGAGTGTTGGGAGACATGG
CTGACAAGTACGGACCAATCTTCACAATCAGGATGGGCGTACATCGCGCT
TTGGTGGTGAGCAATTGGGAGATGGCTAAAGAGTGTCTCACTACACATGA
CAGAGTCTTTGCCAGCCGTCCAAAAGCTCTTGTCGCAGAGATATTAGGCT
TCAACTTTTCCATGTTTGGTTTCAGCCCATATGGTCCCCATTGGCGCCAG
ATACGCAAGATAGCCACACTTGAGCTTCTCTCAAACCATCGGCTTGAGAA
GCTCAGCATGTTCGAGAAGGCGAGGTAAAGACTTGTTTGAAGGAGTTATA
TGAGTTTTGGGAACGTACGAACATTACAAAAGTTCGGATCATAATAACAC
AAGAAGGTATTGGTGGAGATGAACAAATGGTTTGAGGATGTACCCCTTAT
ACGATCTTAAGGGGTACGGTTGGACAAAGATGCATTCATCATCATCACAA
GAGGATACCGATCATGAAGGAGCATGGAAAGAGGAATTGACCAAATTTTT
GCTTTTAGTGGTAATTTCGTGGTGTCCGATCCCTGCCCGTTTGAAATGG
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