EY728793

Overview
NameEY728793
Unique NameEY728793
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length849
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY728793_ssr736 microsatellite EY728793_ssr736:736..747. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY728793 vs. ExPASy Swiss-Prot
Match: C71BJ_ARATH (Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=CYP71B19 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.135e-16
Identity = 53/137 (38.69%), Postives = 73/137 (53.28%), Query Frame = 3
Query:  174 VSRNYASNKKKRGP---PEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLSMFEKAR 575
            VS  + + K KR     P +   +PVIG+LH +G  P HR L  +A++YGP+  +  G     VVS+ E A+E L THD    SRPK +   +L  +F   GF+PYG  W+  RK A  EL     L+K+  F   R
Sbjct:   14 VSLIFFAKKIKRSKWNLPPSPPKFPVIGNLHQIGELP-HRSLQHLAERYGPVMLLHFGFVPITVVSSREAAEEVLRTHDLDCCSRPKLVGTRLLSRDFKDIGFTPYGNEWKARRKFALRELFC---LKKVQSFRHIR 146          
BLAST of EY728793 vs. ExPASy Swiss-Prot
Match: C71AN_ARATH (Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=CYP71A23 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.094e-16
Identity = 42/100 (42.00%), Postives = 63/100 (63.00%), Query Frame = 3
Query:  237 PVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSN 536
            P+IG+LH L + P HR L  ++ +YGP+  +  G    +V S  E A++ L THDRVFASRP++ + E L +       +PYG +WRQ++ ++ L LLSN
Sbjct:   37 PLIGNLHQLSQHP-HRSLCYLSHRYGPLMLLHFGSVPVIVASTAEAARDVLKTHDRVFASRPRSKIFEKLLYKSRNMASAPYGEYWRQMKSVSVLHLLSN 135          
BLAST of EY728793 vs. ExPASy Swiss-Prot
Match: C71B2_ARATH (Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CYP71B2 PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 1.191e-15
Identity = 41/111 (36.94%), Postives = 68/111 (61.26%), Query Frame = 3
Query:  216 PEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLE 548
            P +  + P+IG+LH L   P HR    ++ KYGP+  +R+G    +V+S+ E A+  L T+D    SRPK + +  L + F    F+PYG +WR++RK+A +EL S+ +++
Sbjct:   32 PPSPSSLPIIGNLHHLAGLP-HRCFHKLSIKYGPLVFLRLGSVPVVVISSSEAAEAVLKTNDLECCSRPKTVGSGKLSYGFKDITFAPYGEYWREVRKLAVIELFSSKKVQ 141          
BLAST of EY728793 vs. ExPASy Swiss-Prot
Match: C75A2_SOLME (Flavonoid 3',5'-hydroxylase OS=Solanum melongena GN=CYP75A2 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.556e-15
Identity = 48/117 (41.03%), Postives = 65/117 (55.56%), Query Frame = 3
Query:  198 KKKRGPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLE 548
            +++R PP   G WPVIG L LLG  P H  L  MA KYGPI  +++G    +V S    AK  L T D  F++RP    A  + +N     F+PYGP W+ +RK++ L +L    LE
Sbjct:   32 RRRRLPPGPEG-WPVIGALPLLGGMP-HVALAKMAKKYGPIMYLKVGTCGMVVASTPNAAKAFLKTLDINFSNRPPNAGATHMAYNAQDMVFAPYGPRWKLLRKLSNLHMLGGKALE 146          
BLAST of EY728793 vs. ExPASy Swiss-Prot
Match: C71C4_MAIZE (Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.556e-15
Identity = 42/100 (42.00%), Postives = 69/100 (69.00%), Query Frame = 3
Query:  237 PVIGHLHLLGRFPLHRVLGDMADKYGP-IFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLS 533
            P+IGHLHL+G  P +  L  +A +YGP +  +R+G    +VVS+  +A+  L T+D VF+SRP++LV++I+ +  +   F+PYG H+R+ RK+ T+ LL+
Sbjct:   76 PIIGHLHLMGDIP-YVSLAALATRYGPDLMLLRLGAVPTVVVSSPRVAEAVLRTYDHVFSSRPRSLVSDIIMYGATDSCFAPYGDHFRKARKLVTVHLLN 174          
BLAST of EY728793 vs. ExPASy Swiss-Prot
Match: C71BK_ARATH (Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=CYP71B20 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.556e-15
Identity = 48/120 (40.00%), Postives = 65/120 (54.17%), Query Frame = 3
Query:  216 PEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLSMFEKAR 575
            P +   +PVIG+LH +G  P HR L  +A++YGP+  +  G     VVS+ E A+E L THD    SRPK +   +L  NF    F+PYG  W+  RK A  EL     L+K+  F   R
Sbjct:   31 PPSPPKFPVIGNLHQIGELP-HRSLQHLAERYGPVMLLHFGFVPVTVVSSREAAEEVLRTHDLDCCSRPKLVGTRLLSRNFKDVCFTPYGNEWKARRKFALRELFC---LKKVQSFRHIR 146          
BLAST of EY728793 vs. ExPASy Swiss-Prot
Match: F3PH_ARATH (Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana GN=CYP75B1 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.032e-15
Identity = 46/123 (37.40%), Postives = 68/123 (55.28%), Query Frame = 3
Query:  180 RNYASNKKKRGPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLE 548
            RN + N +    P     WP+IG+L  +G  P HR L  M   YGPI  +R+G    +V ++  +A++ L  HD  FASRP    A+ + +N+    F+PYG  WR +RKI+++ L S   LE
Sbjct:   25 RNRSHNNRL---PPGPNPWPIIGNLPHMGTKP-HRTLSAMVTTYGPILHLRLGFVDVVVAASKSVAEQFLKIHDANFASRPPNSGAKHMAYNYQDLVFAPYGHRWRLLRKISSVHLFSAKALE 143          
BLAST of EY728793 vs. ExPASy Swiss-Prot
Match: C71BS_ARATH (Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=CYP71B28 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.032e-15
Identity = 43/105 (40.95%), Postives = 66/105 (62.86%), Query Frame = 3
Query:  237 PVIGHLHLLGRFPLH-RVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLE 548
            P+IG+LH   R  LH R   ++++KYGPI  +R G    +V+S+ E A+E L THD    SRP+ +    + +NF   GF+PYG  WR +RK++ +EL S+ +L+
Sbjct:   36 PIIGNLHQ--RRELHPRNSRNLSEKYGPIVFLRYGFVPVVVISSKEAAEEVLKTHDLECCSRPETVGTRAISYNFKDIGFAPYGEDWRTMRKLSVVELFSSKKLQ 138          
BLAST of EY728793 vs. ExPASy Swiss-Prot
Match: C84A1_ARATH (Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CYP84A1 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.466e-15
Identity = 41/118 (34.75%), Postives = 69/118 (58.47%), Query Frame = 3
Query:  201 KKRGPPEAGG--AWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLE 548
            ++R PP   G   WP+IG++ ++ +   HR L ++A KYG +  +RMG      VS+ E+A++ L   D VF++RP  +    L ++ +   F+ YGP WRQ+RK+  +++ S  R E
Sbjct:   34 RRRRPPYPPGPRGWPIIGNMLMMDQLT-HRGLANLAKKYGGLCHLRMGFLHMYAVSSPEVARQVLQVQDSVFSNRPATIAISYLTYDRADMAFAHYGPFWRQMRKVCVMKVFSRKRAE 150          
BLAST of EY728793 vs. ExPASy Swiss-Prot
Match: C71AD_ARATH (Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=CYP71A13 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.526e-15
Identity = 47/113 (41.59%), Postives = 65/113 (57.52%), Query Frame = 3
Query:  237 PVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLSMFEKAR 575
            PVIG+LH L   P HR L  ++ +YGP+  +  G    LVVS+ E A+E L THD  FA+RP++     L        F+PYG +WRQ++ +  L LL+N  +E    FEK R
Sbjct:   41 PVIGNLHQLSLHP-HRSLRSLSLRYGPLMLLHFGRVPILVVSSGEAAQEVLKTHDHKFANRPRSKAVHGLMNGGRDVVFAPYGEYWRQMKSVCILNLLTNKMVES---FEKVR 149          
The following BLAST results are available for this feature:
BLAST of EY728793 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
C71BJ_ARATH3.135e-1638.69Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=C... [more]
C71AN_ARATH4.094e-1642.00Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=C... [more]
C71B2_ARATH1.191e-1536.94Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CY... [more]
C75A2_SOLME1.556e-1541.03Flavonoid 3',5'-hydroxylase OS=Solanum melongena G... [more]
C71C4_MAIZE1.556e-1542.00Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 S... [more]
C71BK_ARATH1.556e-1540.00Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=C... [more]
F3PH_ARATH2.032e-1537.40Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana... [more]
C71BS_ARATH2.032e-1540.95Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=C... [more]
C84A1_ARATH3.466e-1534.75Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CY... [more]
C71AD_ARATH4.526e-1541.59Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-008-F09-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728793 ID=EY728793; Name=EY728793; organism=Citrus sinensis; type=EST; length=849bp
CACGCGTCCGTATTTATCTCCTCTATTTGTCTTGAATGTGCATGCATATT
ATATTAAGCTCAACCACTCAGGCTTAGAAGGAAGCAGCGGCGATGGCCTT
TTTTGCATCCCAAACAAGTGCTGTAGCTGCGATTTTAACCCTTATAATCT
TTCTATACACTTTGTTGTTGTTTGTTTCAAGAAATTACGCAAGCAATAAG
AAGAAGAGAGGACCTCCAGAAGCTGGTGGAGCATGGCCTGTGATTGGGCA
TCTACACCTCTTGGGAAGGTTCCCCCTTCACAGAGTGTTGGGAGACATGG
CTGACAAGTACGGACCAATCTTCACAATCAGGATGGGCGTACATCGCGCT
TTGGTGGTGAGCAATTGGGAGATGGCTAAAGAGTGTCTCACTACACATGA
CAGAGTCTTTGCCAGCCGTCCAAAAGCTCTTGTCGCAGAGATATTAGGCT
TCAACTTTTCCATGTTTGGTTTCAGCCCATATGGTCCCCATTGGCGCCAG
ATACGCAAGATAGCCACACTTGAGCTTCTCTCAAACCATCGGCTTGAGAA
GCTCAGCATGTTCGAGAAGGCGAGGTAAAGACTTGTTTGAAGGAGTTATA
TGAGTTTTGGGAACGTACGAACATTACAAAAGTTCGGATCATAATAACAC
AAGAAGGTATTGGTGGAGATGAACAAATGGTTTGAGGATGTACCCCTTAT
ACGATCTTAAGGGGTACGGTTGGACAAAGATGCATTCATCATCATCACAA
GAGGATACCGATCATGAAGGAGCATGGAAAGAGGAATTGACCAAATTTTT
GCTTTTAGTGGTAATTTCGTGGTGTCCGATCCCTGCCCGTTTGAAATGG
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