EY728793

Overview
NameEY728793
Unique NameEY728793
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length849
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY728793_ssr736 microsatellite EY728793_ssr736:736..747. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY728793 vs. ExPASy Swiss-Prot
Match: C71DD_MENPI (Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D13 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.456e-13
Identity = 44/109 (40.37%), Postives = 66/109 (60.55%), Query Frame = 3
Query:  210 GPPEAGGAWPVIGHLHLL-GRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLS 533
            GPP+     P+IGHLHLL G+ P H  L  +A +YGP+  +++G   ++V+S+ E  KE +   D   A R +++  +I+ ++     FSPY  HWRQ+RKI   ELLS
Sbjct:   38 GPPKL----PLIGHLHLLWGKLPQH-ALASVAKQYGPVAHVQLGEVFSVVLSSREATKEAMKLVDPACADRFESIGTKIMWYDNDDIIFSPYSVHWRQMRKICVSELLS 141          
BLAST of EY728793 vs. ExPASy Swiss-Prot
Match: C71C2_MAIZE (Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.456e-13
Identity = 50/140 (35.71%), Postives = 74/140 (52.86%), Query Frame = 3
Query:  189 ASNKKKRG-----PPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGP--IFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLSMFEKAR*RLV 587
            ++NK+K+      PP   G  P+IGHLHL+G    H  + D+  K+G   +  +R+G    L VS+   A   L T D +FASRP  + AEI+ +  S   F PYG + RQ RK+ T  +LS  +++      +   RLV
Sbjct:   46 SANKRKQQQRLPLPPWPPGKLPIIGHLHLIGA-ETHISIRDLDAKHGRNGLLLLRIGAVPTLFVSSPSAADAVLRTQDHIFASRPPWMAAEIIRYGPSDVAFVPYGEYGRQGRKLLTTHMLSTKKVQSFRHGRQEEVRLV 184          
BLAST of EY728793 vs. ExPASy Swiss-Prot
Match: C71BW_ARATH (Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=CYP71B35 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.456e-13
Identity = 40/124 (32.26%), Postives = 68/124 (54.84%), Query Frame = 3
Query:  183 NYASNKKKRGPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKL 554
            N+  + K R  P   G +P+IG+LH +G  P H+ L  ++ KYGP+  + +G    +VVS+ + A++ L  HD    +RP       L +N+    FSPY  +W+++RK+   EL S  ++  +
Sbjct:   21 NHKKHPKYRQFPCPPG-FPIIGNLHQIGELP-HQTLWKLSKKYGPVMHLMLGRVPTVVVSSSDTARQVLRVHDLHCCTRPSLSGPRELSYNYLDIAFSPYDDYWKEVRKLCVQELFSTKQVHSI 142          
BLAST of EY728793 vs. ExPASy Swiss-Prot
Match: C71AG_ARATH (Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=CYP71A16 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.456e-13
Identity = 38/104 (36.54%), Postives = 61/104 (58.65%), Query Frame = 3
Query:  237 PVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLE 548
            PVIG+LH L   P HR L  ++ ++GP+  +R G    L+VS+ ++A + + THD  FA+RP    A  +        F+PYG +WR ++ + T+ LLSN  ++
Sbjct:   40 PVIGNLHQLSLHP-HRALSSLSARHGPLMLLRFGRVPVLIVSSADVAHDVMKTHDLKFANRPITKSAHKISNGGRDLVFAPYGEYWRNVKSLCTIHLLSNKMVQ 142          
BLAST of EY728793 vs. ExPASy Swiss-Prot
Match: C93A1_SOYBN (Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.902e-13
Identity = 42/122 (34.43%), Postives = 71/122 (58.20%), Query Frame = 3
Query:  198 KKKRGPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFS----MFGFSPYGPHWRQIRKIATLELLSNHRLEK 551
            + K+  P +  A P+IGHLHL+   P H+    ++ ++GPI  + +G    +V S  E AKE L TH+  F++RP   VA + G  +     +F F+P+GP+W+ ++K+   ELLS   +++
Sbjct:   24 QSKKNLPPSPKALPIIGHLHLVSPIP-HQDFYKLSTRHGPIMQLFLGSVPCVVASTAEAAKEFLKTHEINFSNRPGQNVA-VKGLAYDSQDFLFAFAPFGPYWKFMKKLCMSELLSGRMMDQ 143          
BLAST of EY728793 vs. ExPASy Swiss-Prot
Match: C77A2_SOLME (Cytochrome P450 77A2 OS=Solanum melongena GN=CYP77A2 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.902e-13
Identity = 46/132 (34.85%), Postives = 73/132 (55.30%), Query Frame = 3
Query:  189 ASNKKKRGPPEAGGAWPVIGHLHLLGRF--PLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMF--GFSPYGPHWRQIRKIATLELLSNHRLEKLSMFEKA 572
            A +KK + PP   G WPV+G+L  + R   P  +++ ++  KYGPIFT+RMG    +++SN ++  E L    +VFA+RP+      + F+   F    + YGP WR +RK      LS+ RL++     K+
Sbjct:   35 AESKKLKLPPGPPG-WPVVGNLLQVARSGKPFFQIMRELRQKYGPIFTLRMGTRTMIILSNADLVHEALILKGQVFATRPRENPTRTV-FSCDKFTVNAAVYGPVWRSLRKNMVQNGLSSIRLKEFRAVRKS 164          
BLAST of EY728793 vs. ExPASy Swiss-Prot
Match: C71DI_MENSP (Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.484e-13
Identity = 43/117 (36.75%), Postives = 66/117 (56.41%), Query Frame = 3
Query:  186 YASNKKKRGPPEAGGAWPVIGHLHLL-GRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLS 533
            +  +K ++  P +    PVIGHLH L G  P H V   +A KYGP+  +++G   ++V+S+ E AK+ +   D  FA R   + +  + ++     FSPY  HWRQ+R+I   ELLS
Sbjct:   25 WRKSKSQQNLPPSPPKLPVIGHLHFLWGGLPQH-VFRSIAQKYGPVAHVQLGEVYSVVLSSAEAAKQAMKVLDPNFADRFDGIGSRTMWYDKDDIIFSPYNDHWRQMRRICVTELLS 140          
BLAST of EY728793 vs. ExPASy Swiss-Prot
Match: C71DI_MENGR (Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.484e-13
Identity = 43/117 (36.75%), Postives = 66/117 (56.41%), Query Frame = 3
Query:  186 YASNKKKRGPPEAGGAWPVIGHLHLL-GRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLS 533
            +  +K ++  P +    PVIGHLH L G  P H V   +A KYGP+  +++G   ++V+S+ E AK+ +   D  FA R   + +  + ++     FSPY  HWRQ+R+I   ELLS
Sbjct:   25 WRKSKSQQNLPPSPPKLPVIGHLHFLWGGLPQH-VFRSIAQKYGPVAHVQLGEVYSVVLSSAEAAKQAMKVLDPNFADRFDGIGSRTMWYDKDDIIFSPYNDHWRQMRRICVTELLS 140          
BLAST of EY728793 vs. ExPASy Swiss-Prot
Match: C71BQ_ARATH (Cytochrome P450 71B26 OS=Arabidopsis thaliana GN=CYP71B26 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.484e-13
Identity = 38/125 (30.40%), Postives = 70/125 (56.00%), Query Frame = 3
Query:  180 RNYASNKKKRGPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKL 554
            +N+  +++   PP     +P+IG+LH LG    H+ L  ++ KYGP+  +++G    L++S+ E AK+ L  +D    SRP       L +N      SPY  +W+++RK+ + EL S ++++ +
Sbjct:   24 KNHGKHRRIPSPP----GFPIIGNLHQLGELQ-HQSLWKLSKKYGPVMLLKLGKVPTLILSSSETAKQALRDYDLHCCSRPSLAGGRELSYNNLDMSSSPYNEYWKELRKLCSQELFSANKIQSI 143          
BLAST of EY728793 vs. ExPASy Swiss-Prot
Match: C71BC_ARATH (Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=CYP71B12 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.484e-13
Identity = 41/124 (33.06%), Postives = 63/124 (50.81%), Query Frame = 3
Query:  198 KKKRGPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLSMFEK 569
            K K+  P      P+IG+LH LG  P HR +  +++ YGP+ +++ G    +V S  E  KE L T D    SRP       + +N     FSPY  +WR++RK+  +EL +  R++      K
Sbjct:   24 KTKKNLPPGPPRLPIIGNLHQLGSKP-HRSMFKLSETYGPLMSLKFGSVSTVVASTPETVKEVLKTFDVECCSRPNMTYPARVTYNLKDLCFSPYSKYWREVRKMTVVELYTAKRVQSFQHTRK 146          
The following BLAST results are available for this feature:
BLAST of EY728793 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
C71DD_MENPI1.456e-1340.37Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D... [more]
C71C2_MAIZE1.456e-1335.71Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 S... [more]
C71BW_ARATH1.456e-1332.26Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=C... [more]
C71AG_ARATH1.456e-1336.54Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=C... [more]
C93A1_SOYBN1.902e-1334.43Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=... [more]
C77A2_SOLME1.902e-1334.85Cytochrome P450 77A2 OS=Solanum melongena GN=CYP77... [more]
C71DI_MENSP2.484e-1336.75Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D1... [more]
C71DI_MENGR2.484e-1336.75Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D... [more]
C71BQ_ARATH2.484e-1330.40Cytochrome P450 71B26 OS=Arabidopsis thaliana GN=C... [more]
C71BC_ARATH2.484e-1333.06Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-008-F09-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728793 ID=EY728793; Name=EY728793; organism=Citrus sinensis; type=EST; length=849bp
CACGCGTCCGTATTTATCTCCTCTATTTGTCTTGAATGTGCATGCATATT
ATATTAAGCTCAACCACTCAGGCTTAGAAGGAAGCAGCGGCGATGGCCTT
TTTTGCATCCCAAACAAGTGCTGTAGCTGCGATTTTAACCCTTATAATCT
TTCTATACACTTTGTTGTTGTTTGTTTCAAGAAATTACGCAAGCAATAAG
AAGAAGAGAGGACCTCCAGAAGCTGGTGGAGCATGGCCTGTGATTGGGCA
TCTACACCTCTTGGGAAGGTTCCCCCTTCACAGAGTGTTGGGAGACATGG
CTGACAAGTACGGACCAATCTTCACAATCAGGATGGGCGTACATCGCGCT
TTGGTGGTGAGCAATTGGGAGATGGCTAAAGAGTGTCTCACTACACATGA
CAGAGTCTTTGCCAGCCGTCCAAAAGCTCTTGTCGCAGAGATATTAGGCT
TCAACTTTTCCATGTTTGGTTTCAGCCCATATGGTCCCCATTGGCGCCAG
ATACGCAAGATAGCCACACTTGAGCTTCTCTCAAACCATCGGCTTGAGAA
GCTCAGCATGTTCGAGAAGGCGAGGTAAAGACTTGTTTGAAGGAGTTATA
TGAGTTTTGGGAACGTACGAACATTACAAAAGTTCGGATCATAATAACAC
AAGAAGGTATTGGTGGAGATGAACAAATGGTTTGAGGATGTACCCCTTAT
ACGATCTTAAGGGGTACGGTTGGACAAAGATGCATTCATCATCATCACAA
GAGGATACCGATCATGAAGGAGCATGGAAAGAGGAATTGACCAAATTTTT
GCTTTTAGTGGTAATTTCGTGGTGTCCGATCCCTGCCCGTTTGAAATGG
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