EY728793

Overview
NameEY728793
Unique NameEY728793
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length849
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY728793_ssr736 microsatellite EY728793_ssr736:736..747. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY728793 vs. ExPASy Swiss-Prot
Match: C71B8_ARATH (Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CYP71B8 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.103e-12
Identity = 40/107 (37.38%), Postives = 61/107 (57.01%), Query Frame = 3
Query:  213 PPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLS 533
            PP   G  P+IG+LH LGR  LH     ++ ++GP+  +R GV   +V+S+ E AK+ L + D    SRPK +   +   NF    F+ YG  WR+++K+  LEL +
Sbjct:   31 PPGPTGL-PIIGNLHQLGRL-LHSSFHKLSLEHGPVMLLRFGVVPMVVISSKEAAKQVLKSRDLETCSRPKLVANGLFTRNFKDIAFAQYGEDWREMKKLVGLELFN 135          
BLAST of EY728793 vs. ExPASy Swiss-Prot
Match: C71AK_ARATH (Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=CYP71A20 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 2.103e-12
Identity = 41/113 (36.28%), Postives = 64/113 (56.64%), Query Frame = 3
Query:  237 PVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLSMFEKAR 575
            PVIG+LH L     HR L  ++ +YGP+  +  G    L+VS+ ++A + + THD V A+RPK  V + +        F+PYG +WRQ++ I    LL+N   + +  +EK R
Sbjct:   40 PVIGNLHQLS-LHTHRSLRSLSLRYGPLMLLHFGRTPVLIVSSADVAHDVMKTHDLVCANRPKTKVVDKILSGGRDVAFAPYGEYWRQMKSICIQNLLNN---KMVRSYEKIR 148          
BLAST of EY728793 vs. ExPASy Swiss-Prot
Match: C76C2_ARATH (Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CYP76C2 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.746e-12
Identity = 40/114 (35.09%), Postives = 64/114 (56.14%), Query Frame = 3
Query:  210 GPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASR-PKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLE 548
            GPP      P+IG++HL+GR P H    D++  YGPI +++ G    +VV++ E A+E L T+D++ +SR P   +  I     S+    P    WR +RK++  +L S  R+E
Sbjct:   41 GPPRL----PIIGNIHLVGRNP-HHSFADLSKTYGPIMSLKFGSLNTVVVTSPEAAREVLRTYDQILSSRTPTNSIRSINHDKVSVVWLPPSSSRWRLLRKLSATQLFSPQRIE 149          
BLAST of EY728793 vs. ExPASy Swiss-Prot
Match: C76C1_ARATH (Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CYP76C1 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.587e-12
Identity = 37/114 (32.46%), Postives = 67/114 (58.77%), Query Frame = 3
Query:  210 GPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASR-PKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLE 548
            GPP      P+IG++HL+G+ P HR   +++  YGP+ ++++G    +V+++ E A+E L THD++ ++R P   V  I   + S+         WR +R+++  +LLS  R+E
Sbjct:   41 GPPRL----PIIGNIHLVGKHP-HRSFAELSKTYGPVMSLKLGSLNTVVIASPEAAREVLRTHDQILSARSPTNAVRSINHQDASLVWLPSSSARWRLLRRLSVTQLLSPQRIE 149          
BLAST of EY728793 vs. ExPASy Swiss-Prot
Match: C71BD_ARATH (Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=CYP71B13 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.587e-12
Identity = 37/119 (31.09%), Postives = 64/119 (53.78%), Query Frame = 3
Query:  192 SNKKKRGPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLE 548
            + K K+  P      P+IG+LH LG  P HR +  +++KYGP+  +++G   ++V S  E  K+ L T D+   SR        + +N     F+PY  +W+ +RK+  +EL +  R++
Sbjct:   22 TRKTKKNLPPGPPRLPIIGNLHQLGSKP-HRSMFKLSEKYGPLVYLKLGKVPSVVASTPETVKDVLKTFDKDCCSRAFLTYPARISYNLKDLAFAPYSKYWKAVRKMTVVELYTAKRVK 139          
BLAST of EY728793 vs. ExPASy Swiss-Prot
Match: C71BG_ARATH (Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=CYP71B16 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.684e-12
Identity = 37/104 (35.58%), Postives = 56/104 (53.85%), Query Frame = 3
Query:  216 PEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLEL 527
            P +   +PVIG+LH +G  P HR    +A++ G +  +  G     V+S+ E A+E L THD    +RPK + + ++   F    F+PYG  WR+ RK    EL
Sbjct:   31 PPSPPTFPVIGNLHQVGELP-HRSFQRLAERTGHVMLLHFGFVPVTVISSREAAEEVLRTHDLKCCTRPKLVGSRLISRGFKDISFTPYGEEWRERRKFLVREL 133          
BLAST of EY728793 vs. ExPASy Swiss-Prot
Match: C93A2_SOYBN (Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.118e-12
Identity = 44/122 (36.07%), Postives = 66/122 (54.10%), Query Frame = 3
Query:  186 YASNKKKRGPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEK 551
            +   +KK+ PP   G  P+IGHLHL+   P H+    ++ ++GPI  + +G    +V S  E AKE L TH+  F++RP   VA      F  + F PYGP  + I+K+   ELL    L++
Sbjct:   21 WRKERKKKLPPSPKGL-PIIGHLHLVSPIP-HQDFYKLSLRHGPIMQLFLGSVPCVVASTAEAAKEFLKTHEINFSNRPGQNVA----VQFLTYVFGPYGPSVKFIKKLCMSELLGGRMLDQ 136          
BLAST of EY728793 vs. ExPASy Swiss-Prot
Match: TCMO_SOYBN (Trans-cinnamate 4-monooxygenase OS=Glycine max GN=CYP73A11 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.363e-11
Identity = 39/100 (39.00%), Postives = 57/100 (57.00%), Query Frame = 3
Query:  237 PVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSN 536
            P+ G+   +G    HR L D+A K+G IF +RMG    +VVS+ E+AKE L T    F SR + +V +I         F+ YG HWR++R+I T+   +N
Sbjct:   41 PIFGNWLQVGDDLNHRNLTDLAKKFGDIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTN 140          
BLAST of EY728793 vs. ExPASy Swiss-Prot
Match: TCMO_CATRO (Trans-cinnamate 4-monooxygenase OS=Catharanthus roseus GN=CYP73A4 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.363e-11
Identity = 40/100 (40.00%), Postives = 56/100 (56.00%), Query Frame = 3
Query:  237 PVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSN 536
            PV G+   +G    HR L D A K+G IF +RMG    +VVS+ E+AKE L T    F SR + +V +I         F+ YG HWR++R+I T+   +N
Sbjct:   41 PVFGNWLQVGDDLNHRNLSDYAKKFGEIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTN 140          
BLAST of EY728793 vs. ExPASy Swiss-Prot
Match: C71B3_ARATH (Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CYP71B3 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.780e-11
Identity = 38/114 (33.33%), Postives = 62/114 (54.39%), Query Frame = 3
Query:  204 KRGPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRL 545
            KR  P +    P+IG+LH L R   HR L D++ K+GP+  +R+G    +V+S+ E A+E L  HD    +RPK   +     +     F+PYG   R++RK++ +   S  ++
Sbjct:   26 KRNLPPSPPKLPIIGNLHQL-RGLFHRCLHDLSKKHGPVLLLRLGFIDMVVISSKEAAEEVLKVHDLECCTRPKTNASSKFSRDGKDIAFAPYGEVSRELRKLSLINFFSTQKV 138          
The following BLAST results are available for this feature:
BLAST of EY728793 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
C71B8_ARATH2.103e-1237.38Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CY... [more]
C71AK_ARATH2.103e-1236.28Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=C... [more]
C76C2_ARATH2.746e-1235.09Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CY... [more]
C76C1_ARATH3.587e-1232.46Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CY... [more]
C71BD_ARATH3.587e-1231.09Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=C... [more]
C71BG_ARATH4.684e-1235.58Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=C... [more]
C93A2_SOYBN6.118e-1236.07Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=... [more]
TCMO_SOYBN1.363e-1139.00Trans-cinnamate 4-monooxygenase OS=Glycine max GN=... [more]
TCMO_CATRO1.363e-1140.00Trans-cinnamate 4-monooxygenase OS=Catharanthus ro... [more]
C71B3_ARATH1.780e-1133.33Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-008-F09-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728793 ID=EY728793; Name=EY728793; organism=Citrus sinensis; type=EST; length=849bp
CACGCGTCCGTATTTATCTCCTCTATTTGTCTTGAATGTGCATGCATATT
ATATTAAGCTCAACCACTCAGGCTTAGAAGGAAGCAGCGGCGATGGCCTT
TTTTGCATCCCAAACAAGTGCTGTAGCTGCGATTTTAACCCTTATAATCT
TTCTATACACTTTGTTGTTGTTTGTTTCAAGAAATTACGCAAGCAATAAG
AAGAAGAGAGGACCTCCAGAAGCTGGTGGAGCATGGCCTGTGATTGGGCA
TCTACACCTCTTGGGAAGGTTCCCCCTTCACAGAGTGTTGGGAGACATGG
CTGACAAGTACGGACCAATCTTCACAATCAGGATGGGCGTACATCGCGCT
TTGGTGGTGAGCAATTGGGAGATGGCTAAAGAGTGTCTCACTACACATGA
CAGAGTCTTTGCCAGCCGTCCAAAAGCTCTTGTCGCAGAGATATTAGGCT
TCAACTTTTCCATGTTTGGTTTCAGCCCATATGGTCCCCATTGGCGCCAG
ATACGCAAGATAGCCACACTTGAGCTTCTCTCAAACCATCGGCTTGAGAA
GCTCAGCATGTTCGAGAAGGCGAGGTAAAGACTTGTTTGAAGGAGTTATA
TGAGTTTTGGGAACGTACGAACATTACAAAAGTTCGGATCATAATAACAC
AAGAAGGTATTGGTGGAGATGAACAAATGGTTTGAGGATGTACCCCTTAT
ACGATCTTAAGGGGTACGGTTGGACAAAGATGCATTCATCATCATCACAA
GAGGATACCGATCATGAAGGAGCATGGAAAGAGGAATTGACCAAATTTTT
GCTTTTAGTGGTAATTTCGTGGTGTCCGATCCCTGCCCGTTTGAAATGG
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