EY728786

Overview
NameEY728786
Unique NameEY728786
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length666
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728786 vs. ExPASy Swiss-Prot
Match: UBA1_BOVIN (Ubiquitin-like modifier-activating enzyme 1 OS=Bos taurus GN=UBA1 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.095e-17
Identity = 45/121 (37.19%), Postives = 71/121 (58.68%), Query Frame = 3
Query:   99 LGVSSLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRHFLFRDWNIGQXXXXXXXXXXXXINPRLNIETLPNRVGPETENVCDDTFWENIGCWINA*DTVAATL-----SVYHRWLRPIID 446
            +G   LKN A++G+ C   G++ +TD D IEKSNL+R FLFR W++ +            +NP + + +  NRVGP+TE + DD F++N+    NA D V A +      VY+R  +P+++
Sbjct:  479 IGCELLKNFAMIGLGCAEDGEIVVTDMDTIEKSNLNRQFLFRPWDVTKLKSDTAAAAVRQMNPHIRVTSHQNRVGPDTERIYDDDFFQNLDGVTNALDNVDARMYMDRRCVYYR--KPLLE 597          
BLAST of EY728786 vs. ExPASy Swiss-Prot
Match: UBA1_RABIT (Ubiquitin-like modifier-activating enzyme 1 OS=Oryctolagus cuniculus GN=UBA1 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.430e-17
Identity = 45/121 (37.19%), Postives = 71/121 (58.68%), Query Frame = 3
Query:   99 LGVSSLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRHFLFRDWNIGQXXXXXXXXXXXXINPRLNIETLPNRVGPETENVCDDTFWENIGCWINA*DTVAATL-----SVYHRWLRPIID 446
            +G   LKN A++G+ CG  G++ +TD D IEKSNL+R FLFR W++ +            +NP + + +  NRVGP+TE + DD F++ +    NA D V A +      VY+R  +P+++
Sbjct:  479 IGCELLKNFAMIGLGCGENGEIIVTDMDTIEKSNLNRQFLFRPWDVTKLKSDTAAAAVHQMNPHIRVTSHQNRVGPDTERIYDDDFFQTLDGVANALDNVDARMYMDRRCVYYR--KPLLE 597          
BLAST of EY728786 vs. ExPASy Swiss-Prot
Match: UBA6_MOUSE (Ubiquitin-like modifier-activating enzyme 6 OS=Mus musculus GN=Uba6 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 2.527e-17
Identity = 49/120 (40.83%), Postives = 66/120 (55.00%), Query Frame = 3
Query:   99 LGVSSLKNVALMGVSCGNQ-GKLTITDDDVIEKSNLSRHFLFRDWNIGQXXXXXXXXXXXXINPRLNIETLPNRVGPETENVCDDTFWENIGCWINA*DTVAATLSVYHRW---LRPIID 446
            +G   LKN AL+GV  G + G +T+TD D+IEKSNL+R FLFR  +I +            INP+L I+   N+V P TE++  D F+      I A D V A   V  R    LRP++D
Sbjct:  471 IGCEMLKNFALLGVGTGREKGMVTVTDPDLIEKSNLNRQFLFRPHHIQKPKSYTAAEATLKINPQLKIDAHLNKVCPATESIYSDEFYTKQDIIITALDNVEARRYVDSRCLANLRPLLD 590          

HSP 2 Score: 31.5722 bits (70), Expect = 2.527e-17
Identity = 13/27 (48.15%), Postives = 18/27 (66.67%), Query Frame = 2
Query:   38 GAKLQNKLEDAKVFIVGSGALGCEFSK 118
            G  L  KL++  +F+VG GA+GCE  K
Sbjct:  451 GNTLCQKLQNLNIFLVGCGAIGCEMLK 477          
BLAST of EY728786 vs. ExPASy Swiss-Prot
Match: UBA6_HUMAN (Ubiquitin-like modifier-activating enzyme 6 OS=Homo sapiens GN=UBA6 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.289e-15
Identity = 46/120 (38.33%), Postives = 64/120 (53.33%), Query Frame = 3
Query:   99 LGVSSLKNVALMGVSCGNQ-GKLTITDDDVIEKSNLSRHFLFRDWNIGQXXXXXXXXXXXXINPRLNIETLPNRVGPETENVCDDTFWENIGCWINA*DTVAATLSVYHRW---LRPIID 446
            +G   LKN AL+GV    + G +T+TD D+IEKSNL+R FLFR  +I +            IN ++ I+   N+V P TE + +D F+      I A D V A   V  R    LRP++D
Sbjct:  471 IGCEMLKNFALLGVGTSKEKGMITVTDPDLIEKSNLNRQFLFRPHHIQKPKSYTAADATLKINSQIKIDAHLNKVCPTTETIYNDEFYTKQDVIITALDNVEARRYVDSRCLANLRPLLD 590          

HSP 2 Score: 31.5722 bits (70), Expect = 1.289e-15
Identity = 13/27 (48.15%), Postives = 18/27 (66.67%), Query Frame = 2
Query:   38 GAKLQNKLEDAKVFIVGSGALGCEFSK 118
            G  L  KL++  +F+VG GA+GCE  K
Sbjct:  451 GDTLCQKLQNLNIFLVGCGAIGCEMLK 477          
BLAST of EY728786 vs. ExPASy Swiss-Prot
Match: UBA7_HUMAN (Ubiquitin-like modifier-activating enzyme 7 OS=Homo sapiens GN=UBA7 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 3.678e-15
Identity = 41/119 (34.45%), Postives = 62/119 (52.10%), Query Frame = 3
Query:   99 LGVSSLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRHFLFRDWNIGQXXXXXXXXXXXXINPRLNIETLPNRVGPETENVCDDTFWENIGCWINA*DTVAATLSVYHR---WLRPIID 446
            +G   LK  AL+G+  GN G LT+ D D IE+SNLSR FLFR  ++G+            +NP L +  L   + P TE++  D F+  +     A D+  A   V  R   +L+P+++
Sbjct:  443 IGCELLKVFALVGLGAGNSGGLTVVDMDHIERSNLSRQFLFRSQDVGRPKAEVAAAAARGLNPDLQVIPLTYPLDPTTEHIYGDNFFSRVDGVAAALDSFQARRYVAARCTHYLKPLLE 561          

HSP 2 Score: 33.4982 bits (75), Expect = 3.678e-15
Identity = 15/29 (51.72%), Postives = 18/29 (62.07%), Query Frame = 2
Query:   32 VFGAKLQNKLEDAKVFIVGSGALGCEFSK 118
            VFGA  Q KL      +VG+GA+GCE  K
Sbjct:  421 VFGAGFQEKLRRQHYLLVGAGAIGCELLK 449          
The following BLAST results are available for this feature:
BLAST of EY728786 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
UBA1_BOVIN1.095e-1737.19Ubiquitin-like modifier-activating enzyme 1 OS=Bos... [more]
UBA1_RABIT1.430e-1737.19Ubiquitin-like modifier-activating enzyme 1 OS=Ory... [more]
UBA6_MOUSE2.527e-1740.83Ubiquitin-like modifier-activating enzyme 6 OS=Mus... [more]
UBA6_HUMAN1.289e-1538.33Ubiquitin-like modifier-activating enzyme 6 OS=Hom... [more]
UBA7_HUMAN3.678e-1534.45Ubiquitin-like modifier-activating enzyme 7 OS=Hom... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-008-E10-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728786 ID=EY728786; Name=EY728786; organism=Citrus sinensis; type=EST; length=666bp
TTAGGTCGACCACGCGTCCGACAAATTTCTAGTGTTTGGGGCCAAGCTCC
AAAATAAGCTGGAGGATGCTAAAGTGTTCATTGTAGGATCTGGTGCACTT
GGGTGTGAGTTCTCTAAAGAATGTGGCGCTGATGGGAGTTTCATGTGGTA
ATCAAGGAAAACTAACTATTACTGATGATGATGTAATTGAAAAGAGTAAC
CTTAGTAGGCACTTTCTCTTCCGTGATTGGAATATTGGGCAGGCCAAATC
CACTGTAGCTGCTTCTGCTGCTACATCAATAAATCCTCGTCTCAACATTG
AAACTTTGCCAAATCGTGTGGGTCCTGAAACAGAGAATGTGTGTGATGAT
ACCTTCTGGGAAAATATAGGGTGCTGGATCAATGCATGAGACACTGTGGC
CGCCACACTGTCTGTATATCATAGGTGGCTACGTCCCATAATCGACCGGT
GCAGTCGGGGAGTCTAGGTGGCCCCTCGACGGCGGAGATCGCCGGGCCGC
GCCTCGGTCACCAGATCGCGCCTCCCCAGATCGCGCGGGCAACCACTGCA
GGAATACCCCGGCGGCAACGCTGCCTTGTCTATGGGAGATGTCTTTGAGC
GGCGCGGCGTACGACCACGGACCCGCGTCGCCCAGACTGCTATCTCCCGG
AGAGCAGGCGAGATCA
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