EY728779

Overview
NameEY728779
Unique NameEY728779
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728779 vs. ExPASy Swiss-Prot
Match: AFG32_HUMAN (AFG3-like protein 2 OS=Homo sapiens GN=AFG3L2 PE=1 SV=2)

HSP 1 Score: 169.859 bits (429), Expect = 1.661e-41
Identity = 92/205 (44.88%), Postives = 126/205 (61.46%), Query Frame = 3
Query:   36 PXCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES-DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSS----DVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHV 635
            P   KTL+A+A A EA + F+ V G E    +VG     VR LFA AR NAP I+F DEID +   RG+ +  G S  +  ++QLLVE+DG +   NV ++A TNRPD +DPALLRPGRFDR +++GPP+   R  IF++HLR +   S    D   R+LA L+ G +GAD++ +C EAA+ A     D+  I  +H + AI  V
Sbjct:  350 PGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDS--INQKHFEQAIERV 552          
BLAST of EY728779 vs. ExPASy Swiss-Prot
Match: PSMR_METKA (Proteasome-activating nucleotidase OS=Methanopyrus kandleri GN=pan PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.169e-41
Identity = 93/201 (46.27%), Postives = 128/201 (63.68%), Query Frame = 3
Query:   36 PXCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES-DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHV 635
            P   KTL+A+AVA+ A   F+ +  PEL  K++GE  + VR LF  AR  APSIIF DEID + A R +++  G     R ++QLL E+DG     ++ VIAATNR D +DPALLRPGRFDR + +  P+E  R EIF+IH R +  + DV++++LA ++EG +GADI  IC EA + AI E+ D   +TM     A+  V
Sbjct:  222 PGTGKTLLAKAVANHADATFIRLAAPELVQKFIGEGARLVRELFELAREKAPSIIFIDEIDAIGARRMRDATSGDREVQRTLTQLLAEMDGFDPLDDIKVIAATNRKDILDPALLRPGRFDRHIKIPLPDEEGRYEIFKIHTRDMNLAEDVDLQKLAKITEGASGADIKAICTEAGMMAIREDRDI--VTMDDFLKAVDRV 420          
BLAST of EY728779 vs. ExPASy Swiss-Prot
Match: PEX6_DICDI (Peroxisomal biogenesis factor 6 OS=Dictyostelium discoideum GN=pex6 PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.699e-41
Identity = 90/191 (47.12%), Postives = 126/191 (65.97%), Query Frame = 3
Query:   36 PXCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE-EIFRIHLRKIPCSSDVNIRELACLSEGC----TGADISLICREAAISAIEENLDAS 593
            P   KTL+A+A+A+E  LNFL+VKGPEL + ++GESEK +R +F KAR   P +IFFDE+D LA  RG  +D   V DRV+SQLL ELDG+ +  +V +I ATNRPD +D +L+RPGR DRLLY+G  +E + + +I +   RK   + DV++R++    E C    TGAD   +  +A  +A  E + AS
Sbjct:  961 PGTGKTLLAKAIATECSLNFLSVKGPELINMYIGESEKNIREIFNKARQAKPCVIFFDELDSLAPSRGNGADSGGVMDRVVSQLLAELDGMQKSSDVFIIGATNRPDLLDSSLMRPGRLDRLLYLGISSEKENQFKILQALTRKFNLADDVDLRKVV---ENCPMNLTGADFYALASDAMSNAFHERITAS 1148          
BLAST of EY728779 vs. ExPASy Swiss-Prot
Match: AFG32_BOVIN (AFG3-like protein 2 OS=Bos taurus GN=AFG3L2 PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.699e-41
Identity = 90/205 (43.90%), Postives = 126/205 (61.46%), Query Frame = 3
Query:   36 PXCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES-DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVN----IRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHV 635
            P   KTL+A+A A EA + F+ V G E    +VG     VR LFA AR NAP I+F DEID +   RG+ +  G S  +  ++QLLVE+DG +   NV ++A TNRPD +DPAL+RPGRFDR +++GPP+   R  IF++HLR +   S +      R+LA L+ G +GAD++ +C EAA+ A     D+  I  +H + AI  V
Sbjct:  351 PGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKEKLARKLASLTPGFSGADVANVCNEAALIAARHLSDS--INQKHFEQAIERV 553          
BLAST of EY728779 vs. ExPASy Swiss-Prot
Match: PSMR_ARCFU (Proteasome-activating nucleotidase OS=Archaeoglobus fulgidus GN=pan PE=1 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 4.832e-41
Identity = 93/201 (46.27%), Postives = 126/201 (62.69%), Query Frame = 3
Query:   36 PXCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIR-GKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHV 635
            P   KTL+A+AVA++    F+ V G E   K++GE  + VR +F  A+  APSIIF DE+D +AA R   ++ G     R M QLL ELDG   R +V VI ATNR D +DPA+LRPGRFDR++ V  P    R +IF+IH RK+  + DV+ +ELA ++EG +GADI  IC EA + AI E  + +++TM     AI  V
Sbjct:  184 PGTGKTLLAKAVANQTRATFIRVVGSEFVQKYIGEGARLVREVFQLAKEKAPSIIFIDELDAIAARRTNSDTSGDREVQRTMMQLLAELDGFDPRGDVKVIGATNRIDILDPAILRPGRFDRIIEVPLPTFEGRIQIFKIHTRKMKLAEDVDFKELARITEGASGADIKAICTEAGMFAIRE--ERAKVTMLDFTKAIEKV 382          
BLAST of EY728779 vs. ExPASy Swiss-Prot
Match: SPA5L_HUMAN (Spermatogenesis-associated protein 5-like protein 1 OS=Homo sapiens GN=SPATA5L1 PE=1 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 6.310e-41
Identity = 94/250 (37.60%), Postives = 144/250 (57.60%), Query Frame = 3
Query:    3 TRPLGF*CLVLPXCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRV-------------------NVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEEN-LDASRITMQHLKTAIRHVQPSEIHSXQELSAKSKGLY 692
            T+P G      P C+KT + RA+A+    +F++V G +LFS +VG+SEK +  +F +ARA+ P+I+F DEID +   R     G  V +RV+S LL ELDG+  +                    +V +IAATNRPD +D ALLRPGR D+++Y+ PP+   R  I ++  + +P   DV++  LA  +   +GAD+  +C EAA+ A++EN LDA+ +  +H   +++ V+PS       LS K   LY
Sbjct:  496 TQPKGVLLYGPPGCAKTTLVRALATSCHCSFVSVSGADLFSPFVGDSEKVLSQIFRQARASTPAILFLDEIDSILGARSASKTGCDVQERVLSVLLNELDGVGLKTIERRGSKSSQQEFQEVFNRSVMIIAATNRPDVLDTALLRPGRLDKIIYIPPPDHKGRLSILKVCTKTMPIGPDVSLENLAAETCFFSGADLRNLCTEAALLALQENGLDATTVKQEHFLKSLKTVKPS-------LSCKDLALY 738          

HSP 2 Score: 147.902 bits (372), Expect = 6.757e-35
Identity = 88/213 (41.31%), Postives = 123/213 (57.75%), Query Frame = 3
Query:   36 PXCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKAR---ANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI---EENLDASRITMQHLKTAIRHVQPSEIHS 656
            P   KT + +AVA EAG   LAV  P L     GE+E+ VR +F +AR   +  PS++F DE+D L   RG  +       RV++Q+L  LDG      V V+ ATNRPD +DPAL RPGRFDR + +G P    R+EI ++   K+P SS V++  LA ++ G  GAD++ +CREAA+ A+   E+N D   I       A +++QPS   S
Sbjct:  243 PGVGKTQLVQAVAREAGAELLAVSAPALQGSRPGETEENVRRVFQRARELASRGPSLLFLDEMDALCPQRGSRAP----ESRVVAQVLTLLDGASGDREVVVVGATNRPDALDPALRRPGRFDREVVIGTPTLKQRKEILQVITSKMPISSHVDLGLLAEMTVGYVGADLTALCREAAMHALLHSEKNQDNPVIDEIDFLEAFKNIQPSSFRS 451          
BLAST of EY728779 vs. ExPASy Swiss-Prot
Match: AFG31_MOUSE (AFG3-like protein 1 OS=Mus musculus GN=Afg3l1 PE=2 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 6.310e-41
Identity = 93/205 (45.37%), Postives = 125/205 (60.98%), Query Frame = 3
Query:   36 PXCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGK-ESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKI----PCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHV 635
            P   KTL+A+A A EA + F+ V G E    +VG     VR +FA AR +AP I+F DEID +   RG+    G S  +  ++Q+LVE+DG +   NV V+A TNRPD +DPAL RPGRFDR +Y+GPP+   R  IF++HLR +      S D   R+LA L+ G TGADIS +C EAA+ A   +L  S +  +H + AI  V
Sbjct:  342 PGTGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDMFAMARKHAPCILFIDEIDAIGRKRGRGHLGGQSEQENTLNQMLVEMDGFNSSTNVVVLAGTNRPDILDPALTRPGRFDRQIYIGPPDIKGRSSIFKVHLRPLKLDGSLSKDALSRKLAALTPGFTGADISNVCNEAALIA-ARHLSPS-VQERHFEQAIERV 544          
BLAST of EY728779 vs. ExPASy Swiss-Prot
Match: YB7A_SCHPO (Uncharacterized AAA domain-containing protein C16E9.10c OS=Schizosaccharomyces pombe GN=SPBC16E9.10c PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 8.241e-41
Identity = 95/224 (42.41%), Postives = 140/224 (62.50%), Query Frame = 3
Query:   36 PXCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVS-VSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGC---TGADISLICREAAISAI-----------------EENLDASRITMQHLKTAIRHVQPS 644
            P C KTL+A+AVA+E+  NF++++GPEL +K+VGESE+AVR +F +ARA++P +IFFDE+D +     +  D +S  S RV++ LL ELDGL  R  V VIAATNRPD IDPA+LRPGR D+ L V  P+  +R EI +   ++ P   +VN+  L    E C   +GAD++ + REAA++A+                    L+  R+T    + A ++++PS
Sbjct:  535 PGCGKTLLAKAVANESKANFISIRGPELLNKYVGESERAVRQVFLRARASSPCVIFFDELDAMVP---RRDDSLSEASSRVVNTLLTELDGLSDRSGVYVIAATNRPDIIDPAMLRPGRLDKTLLVDLPDAHERVEILKTLTKQTPLHEEVNLDVLG-RDERCSNFSGADLAALVREAAVTALRSAVFADIASNEPEITQHSALEPIRVTNADFELAFKNIKPS 754          

HSP 2 Score: 124.02 bits (310), Expect = 1.045e-27
Identity = 72/184 (39.13%), Postives = 107/184 (58.15%), Query Frame = 3
Query:   36 PXCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVN----VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE 575
            P C KT++A A+A+E G+ F+++  P + S   GESEK VR +F +A++ AP ++F DEID +   R  ES    +  R+++Q L  +D L         V VI ATNRPD +D AL R GRFDR + +  P++  RE+I R   + +  S D + R+LA  + G  GAD+  +   A I AI+
Sbjct:  217 PGCGKTMLANALANELGVPFISISAPSIVSGMSGESEKKVREVFEEAKSLAPCLMFIDEIDAVTPKR--ESAQREMERRIVAQFLTCMDELSFEKTDGKPVLVIGATNRPDSLDSALRRAGRFDREICLTVPSQDAREKILRTMAKGLKLSGDFDFRQLAKQTPGYVGADLKALTAAAGIIAIK 398          
BLAST of EY728779 vs. ExPASy Swiss-Prot
Match: PEX1_MOUSE (Peroxisome biogenesis factor 1 OS=Mus musculus GN=Pex1 PE=1 SV=2)

HSP 1 Score: 167.548 bits (423), Expect = 8.241e-41
Identity = 82/183 (44.81%), Postives = 126/183 (68.85%), Query Frame = 3
Query:   36 PXCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 584
            P   KTL+A  VA E+G+NF+++KGPEL SK++G SE+AVR +F +A+A  P I+FFDE + +A  RG ++ GV+  DRV++QLL +LDG+     V V+AAT+RPD IDPALLRPGR D+ +Y  PP++  R EI  +  + +  + DV+++ +A +++  TGAD+  +   A + A++  L
Sbjct:  884 PGTGKTLLAGVVARESGMNFISIKGPELLSKYIGASEQAVRDVFIRAQAAKPCILFFDEFESIAPRRGHDNTGVT--DRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILTVLSKSLALADDVDLQHVASVTDSFTGADLKALLYNAQLEALQGRL 1064          
BLAST of EY728779 vs. ExPASy Swiss-Prot
Match: PSMR_METAC (Proteasome-activating nucleotidase OS=Methanosarcina acetivorans GN=pan PE=3 SV=2)

HSP 1 Score: 167.162 bits (422), Expect = 1.076e-40
Identity = 90/210 (42.86%), Postives = 128/210 (60.95%), Query Frame = 3
Query:    9 PLGF*CLVLPXCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVS-DRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHV 635
            P G     LP   KTL+A+AVA      F+ V G EL  K++G+  K VR +F  AR  APSIIF DE+D +AA R  E+ G      R + QLL E+DG  +R N+ +IAATNRPD +DPA+LRPGRFDRL++V  P    R +I +IH  K+  + D++ ++LA ++EG +GAD+  I  EA + A+ +  D + + M+    A+  V
Sbjct:  193 PKGVLLYGLPGTGKTLLAKAVAHRTNATFIRVVGSELVQKYIGDGSKLVREIFEMARKKAPSIIFIDELDSIAARRLNETTGADREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPGIEARGKILKIHCGKMTLAGDIDFKKLAKVTEGMSGADLKAIATEAGMFAVRK--DKALVEMEDFLEAVEKV 400          
The following BLAST results are available for this feature:
BLAST of EY728779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 382
Match NameE-valueIdentityDescription
AFG32_HUMAN1.661e-4144.88AFG3-like protein 2 OS=Homo sapiens GN=AFG3L2 PE=1... [more]
PSMR_METKA2.169e-4146.27Proteasome-activating nucleotidase OS=Methanopyrus... [more]
PEX6_DICDI3.699e-4147.12Peroxisomal biogenesis factor 6 OS=Dictyostelium d... [more]
AFG32_BOVIN3.699e-4143.90AFG3-like protein 2 OS=Bos taurus GN=AFG3L2 PE=2 S... [more]
PSMR_ARCFU4.832e-4146.27Proteasome-activating nucleotidase OS=Archaeoglobu... [more]
SPA5L_HUMAN6.310e-4137.60Spermatogenesis-associated protein 5-like protein ... [more]
AFG31_MOUSE6.310e-4145.37AFG3-like protein 1 OS=Mus musculus GN=Afg3l1 PE=2... [more]
YB7A_SCHPO8.241e-4142.41Uncharacterized AAA domain-containing protein C16E... [more]
PEX1_MOUSE8.241e-4144.81Peroxisome biogenesis factor 1 OS=Mus musculus GN=... [more]
PSMR_METAC1.076e-4042.86Proteasome-activating nucleotidase OS=Methanosarci... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-008-E03-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728779 ID=EY728779; Name=EY728779; organism=Citrus sinensis; type=EST; length=853bp
CCACGCGTCCGCTGGGATTTTGATGTTTGGTCCTCCCGNGTTGTAGCAAA
ACCCTCATGGCACGTGCAGTAGCTTCAGAAGCAGGGCTGAACTTCCTTGC
AGTGAAGGGTCCAGAGCTTTTTAGCAAATGGGTTGGTGAATCCGAGAAAG
CAGTGCGATCGCTGTTTGCAAAGGCTAGGGCCAATGCTCCATCAATCATA
TTTTTTGATGAAATTGATGGTCTTGCTGCCATTCGTGGGAAGGAAAGTGA
TGGGGTTTCTGTTTCTGATCGGGTTATGAGTCAACTTCTTGTTGAATTGG
ATGGCCTGCATCAAAGAGTTAATGTTACTGTTATTGCTGCTACAAATCGA
CCAGACAAGATTGATCCTGCCCTGTTGCGACCAGGACGCTTTGACAGGCT
TCTGTATGTGGGACCTCCAAATGAGACTGACCGAGAAGAAATATTCCGAA
TTCATTTGCGTAAAATTCCTTGCAGCTCTGATGTAAACATAAGAGAACTG
GCTTGCCTCTCAGAAGGCTGTACTGGGGCTGATATATCATTAATCTGCCG
AGAGGCAGCCATTTCAGCCATTGAGGAGAACCTCGATGCATCAAGAATAA
CAATGCAACACTTGAAGACTGCAATTAGACACGTACAACCATCGGAGATT
CATTCTTANCAGGAGCTCTCAGCTAAGTCCAAAGGCTTGTACACTCTAAT
GCGGAGGCTGATGAATCANGATATCACCTGCGCCCGAATAAATCATCGGA
TTGAATATGTGGTCCCTAATAAATCCATNGCACTGTTCCTATGTCGCTTC
CCAGCAGGCCTCTCACAATCAAAGTCTGGTTCAACCGGGTACTAAAGTTG
TCT
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