EY728779

Overview
NameEY728779
Unique NameEY728779
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728779 vs. ExPASy Swiss-Prot
Match: PSMR_METMA (Proteasome-activating nucleotidase OS=Methanosarcina mazei GN=pan PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.406e-40
Identity = 90/210 (42.86%), Postives = 125/210 (59.52%), Query Frame = 3
Query:    9 PLGF*CLVLPXCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVS-DRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHV 635
            P G     LP   KTL+A+AVA      F+ V G EL  K++G+  K VR +F  AR  APSIIF DE+D +AA R  E+ G      R + QLL E+DG  +R N+ +IAATNRPD +DPA+LRPGRFDRL++V  P    R +I +IH  K+  + D++ ++LA  +EG +GAD+  I  EA + A+    D   + M+    A+  V
Sbjct:  193 PKGVLLYGLPGTGKTLLAKAVAHRTNATFIRVVGSELVQKYIGDGSKLVREIFEMARKKAPSIIFIDELDSIAARRLNETTGADREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPGIEARGKILKIHCEKMTLAEDIDFKKLAKATEGMSGADLKAIATEAGMFAVRR--DKELVEMEEFLEAVEKV 400          
BLAST of EY728779 vs. ExPASy Swiss-Prot
Match: RCA1_SCHPO (Mitochondrial respiratory chain complexes assembly protein rca1 OS=Schizosaccharomyces pombe GN=SPBC543.09 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.132e-40
Identity = 93/220 (42.27%), Postives = 129/220 (58.64%), Query Frame = 3
Query:   36 PXCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDR--VMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNI--RELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSXQELSAKSK 683
            P   KTL+A+A A EA + FL+V G E    +VG     VR LFA AR NAP IIF DEID +   RG+     S  +R   ++QLLVE+DG     ++ V A TNRPD +DPALLRPGRFDR + +  P+   RE+IF++HL+ I  + ++++  + LA L+ G TGADI  +C E A+ A   N  ++ + M H + AI  V        + LS + K
Sbjct:  338 PGTGKTLLAKATAGEANVPFLSVSGSEFLEMFVGVGPSRVRDLFATARKNAPCIIFIDEIDAIGKARGRGGQFGSNDERESTLNQLLVEMDGFTSSEHIVVFAGTNRPDVLDPALLRPGRFDRQITIDRPDIGGREQIFKVHLKHIKAADNIDLIAKRLAVLTSGFTGADIMNVCNEGALIAARSN--SNEVQMVHFEQAIERVTAGLEKKSRVLSPEEK 555          
BLAST of EY728779 vs. ExPASy Swiss-Prot
Match: PEX1_HUMAN (Peroxisome biogenesis factor 1 OS=Homo sapiens GN=PEX1 PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.132e-40
Identity = 83/186 (44.62%), Postives = 126/186 (67.74%), Query Frame = 3
Query:   36 PXCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDAS 593
            P   KTL+A  +A E+ +NF++VKGPEL SK++G SE+AVR +F +A+A  P I+FFDE + +A  RG ++ GV+  DRV++QLL +LDG+     V V+AAT+RPD IDPALLRPGR D+ +Y  PP++  R EI  +    +P + DV+++ +A +++  TGAD+  +   A + A+   L +S
Sbjct:  883 PGTGKTLLAGVIARESRMNFISVKGPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRGHDNTGVT--DRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILNVLSDSLPLADDVDLQHVASVTDSFTGADLKALLYNAQLEALHGMLLSS 1066          
BLAST of EY728779 vs. ExPASy Swiss-Prot
Match: PSMR_METTH (Proteasome-activating nucleotidase OS=Methanobacterium thermoautotrophicum GN=pan PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 5.342e-40
Identity = 91/205 (44.39%), Postives = 122/205 (59.51%), Query Frame = 3
Query:   36 PXCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES-DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSE 647
            P   KTL+A+AVA E    F+ +   E   K++GE  + VR +F  A+  +PSIIF DEID +AA R K S  G     R + QLL ELDG   R NV ++AATNRPD +DPALLRPGRFDR + V  PNE  R EI +IH   +  + +V+I  LA +++G +GAD+  IC EA + AI +  D   +TM     A+  +   E
Sbjct:  194 PGTGKTLLAKAVAHETNATFIKIVASEFVRKYIGEGARLVRGVFELAKEKSPSIIFIDEIDAVAAKRLKSSTSGDREVQRTLMQLLAELDGFESRGNVGIVAATNRPDILDPALLRPGRFDRFIEVPLPNEDGRREILKIHTSGMALAEEVDIELLARITDGASGADLKAICTEAGMFAIRDERD--EVTMADFMDAVDKIMGVE 396          
BLAST of EY728779 vs. ExPASy Swiss-Prot
Match: FTSH_BACPF (Cell division protease ftsH homolog OS=Bacillus pseudofirmus GN=ftsH PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 6.977e-40
Identity = 90/217 (41.47%), Postives = 127/217 (58.53%), Query Frame = 3
Query:   36 PXCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSXQELSAKSK 683
            P   KTL+ARAVA EAG+ F ++ G +    +VG     VR LF  A+ NAP IIF DEID +   RG     G    ++ ++QLLVE+DG      + +IAATNR D +DPALLRPGRFDR + V  P+   REE+ ++H R  P + DVN++ +A  + G +GAD+  +  EAA+ A     D ++I+M H++ AI  V        + +S K K
Sbjct:  208 PGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRADILDPALLRPGRFDRQIQVNRPDVNGREEVLKVHARNKPLNDDVNLKTIATRTPGFSGADLENLLNEAALVAARH--DHTKISMIHIEEAIDRVIAGPAKKSRVISPKEK 422          
BLAST of EY728779 vs. ExPASy Swiss-Prot
Match: PEX6_YEAST (Peroxisomal ATPase PEX6 OS=Saccharomyces cerevisiae GN=PEX6 PE=1 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.554e-39
Identity = 91/182 (50.00%), Postives = 118/182 (64.84%), Query Frame = 3
Query:   36 PXCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVN-VTVIAATNRPDKIDPALLRPGRFDRLLYVG-PPNETDREEIFRIHLRKIPCSSDVNIRELACLSE-GCTGADISLICREAAISAI 572
            P   KTLMA+A+A+   LNF +VKGPEL + ++GESE  VR +F KAR   P +IFFDEID +A  RG + D   V DR++SQLL ELDG+    + V VI ATNRPD +D ALLRPGRFD+LLY+G P  +T +  I     RK    +DV + ELA L     TGAD   +C +A ++A+
Sbjct:  774 PGTGKTLMAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQKAREAKPCVIFFDEIDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSTDADGVFVIGATNRPDLLDEALLRPGRFDKLLYLGIPDTDTKQLNILEALTRKFVLDNDVKLIELAKLCPFNYTGADFYALCSDAMLNAM 955          
BLAST of EY728779 vs. ExPASy Swiss-Prot
Match: SPA5L_BOVIN (Spermatogenesis-associated protein 5-like protein 1 OS=Bos taurus GN=SPATA5L1 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.030e-39
Identity = 90/249 (36.14%), Postives = 141/249 (56.63%), Query Frame = 3
Query:    3 TRPLGF*CLVLPXCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRV-------------------------------NVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEEN-LDASRITMQHLKTAIRHVQPSEIH 653
            T+P G      P C+KT + RA+A+    +F++V G +LFS +VG+SEK +  +F +ARAN P+I+F DEID +   R       +V DRV+S LL ELDG+  +                                NV V+AATNRPD +D ALLRPGR D+++Y+ PP+E  R  I ++  +  P   DV++ ++A  +   +GAD+  +C+EAA+ A++EN L+ + +  +H   +++ V+PS  H
Sbjct:  498 TQPKGVLLYGPPGCAKTTLVRALATSCRCSFVSVSGADLFSPFVGDSEKILSQVFRQARANTPAIVFLDEIDSILGSRSISRTECNVQDRVLSVLLNELDGVGLKTIERRGSKSDQHGKCKQLEKNEELEFQEIFNSNVIVVAATNRPDVLDDALLRPGRLDKIIYIPPPDEKGRLSILKVCTKNTPMGPDVSLEKVAAETCFFSGADLGNLCKEAALLALQENGLEVTTVKQEHFLESLKTVKPSLSH 746          

HSP 2 Score: 145.591 bits (366), Expect = 3.354e-34
Identity = 85/213 (39.91%), Postives = 121/213 (56.81%), Query Frame = 3
Query:   36 PXCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA---PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI---EENLDASRITMQHLKTAIRHVQPSEIHS 656
            P   KT + RAVA E G   LAV  P L     GE+E+ VR +F +AR  A   P+++F DE+D L   RG      +   RV++Q+L  LDG+ +   V V+ +TNRPD +DPAL RPGRFDR + +G P    R+ I ++   K+P S  V++  LA ++ G  GAD++ +CREAA+ A+   E+N D   I       A + +QPS   S
Sbjct:  243 PGVGKTQLVRAVARETGAELLAVSAPALQGARPGETEENVRRIFKRARELASRRPTLLFLDEVDALCPRRGGPHQ--APESRVVAQVLTLLDGIGEDREVVVVGSTNRPDALDPALRRPGRFDREVVIGTPTLRQRKAILQVITSKMPISGQVDLNLLAEMTVGYVGADLTALCREAAMQALLHSEKNQDNPTIDETDFLEAFKKIQPSSFRS 453          
BLAST of EY728779 vs. ExPASy Swiss-Prot
Match: PSMR_UNCMA (Proteasome-activating nucleotidase OS=Uncultured methanogenic archaeon RC-I GN=pan PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.030e-39
Identity = 86/188 (45.74%), Postives = 120/188 (63.83%), Query Frame = 3
Query:   36 PXCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDR----VMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD 587
            P   KTL+A+AVA+     F+ + G EL  K++GE  + VR LF  A+  +PSIIF DEID + A   K  D ++  DR     + QLL E+DG   R NV ++AATNRPD +DPALLRPGRFDR++ V  P    RE+I +IH RK+  + DV++R++A +++  +GAD+S I  EA + AI  N D
Sbjct:  202 PGTGKTLLAKAVANRTKATFIRIIGSELVQKYIGEGARMVRELFELAKEKSPSIIFIDEIDSIGA---KRLDSITSGDREVQRTLVQLLAEMDGFDPRGNVRILAATNRPDILDPALLRPGRFDRMIKVPMPTAEAREQILKIHARKMNLADDVDLRKIALITDESSGADLSAIVMEAGMFAIRNNRD 386          
BLAST of EY728779 vs. ExPASy Swiss-Prot
Match: RIX7_YEAST (Ribosome biogenesis ATPase RIX7 OS=Saccharomyces cerevisiae GN=RIX7 PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.522e-39
Identity = 90/235 (38.30%), Postives = 142/235 (60.43%), Query Frame = 3
Query:   36 PXCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRK--IPCSSDVNIRELACLSEGC---TGADISLICREAAISAIEENLDASR---------------------------ITMQHLKTAIRHVQPS 644
            P C KTL+A+AVA+E+  NF+++KGPEL +K+VGESE+++R +F +ARA+ P +IFFDE+D L  +  +++     S RV++ LL ELDGL+ R  + VI ATNRPD IDPA+LRPGR D+ L++  PN  ++ +I +   +    P SSDV+  E+   +E C   +GAD++ + RE+++ A++     S                            +TM   ++A+R ++PS
Sbjct:  576 PGCGKTLLAKAVANESRANFISIKGPELLNKYVGESERSIRQVFTRARASVPCVIFFDELDAL--VPRRDTSLSESSSRVVNTLLTELDGLNDRRGIFVIGATNRPDMIDPAMLRPGRLDKSLFIELPNTEEKLDIIKTLTKSHGTPLSSDVDFEEI-IRNEKCNNFSGADLAALVRESSVLALKRKFFQSEEIQSVLDNDLDKEFEDLSVGVSGEEIIVTMSDFRSALRKIKPS 807          

HSP 2 Score: 119.013 bits (297), Expect = 3.361e-26
Identity = 72/186 (38.71%), Postives = 104/186 (55.91%), Query Frame = 3
Query:   36 PXCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV--SVSDRVMSQLLVELDGL-HQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE 575
            P C KT +A A+A E  + F+++  P + S   GESEK +R LF +AR+ AP ++FFDEID   AI  K   G    +  R+++QLL  +D L  ++ N   V +I ATNRPD +D AL R GRFDR + +  PNE  R  I +     +     ++  +LA L+ G  GAD+  +   A   AI+
Sbjct:  248 PGCGKTSIANALAGELQVPFISISAPSVVSGMSGESEKKIRDLFDEARSLAPCLVFFDEID---AITPKRDGGAQREMERRIVAQLLTSMDELTMEKTNGKPVIIIGATNRPDSLDAALRRAGRFDREICLNVPNEVSRLHILKKMSDNLKIDGAIDFAKLAKLTPGFVGADLKALVTAAGTCAIK 430          
BLAST of EY728779 vs. ExPASy Swiss-Prot
Match: PSMR_PYRHO (Proteasome-activating nucleotidase OS=Pyrococcus horikoshii GN=pan PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.522e-39
Identity = 93/214 (43.46%), Postives = 130/214 (60.75%), Query Frame = 3
Query:   36 PXCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVS-DRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSXQELSA 674
            P C KTLMA+A+A E    F+ V G EL  K++GE  + V  LF  A+  AP+IIF DEID + A R  E+ G     +R + QLL E+DG   R NV VIAATNRPD +DPALLRPGRFDRL+ V  P+   R EI ++H R++     V++R +A ++EG +GAD+  I  EA + AI E    + +T +    A+  V  +E    Q++++
Sbjct:  183 PGCGKTLMAKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKLKG-VDLRAIAEMTEGASGADLKAIATEAGMFAIRER--RTYVTQEDFLKAVDKVLGNERKLLQQITS 393          
The following BLAST results are available for this feature:
BLAST of EY728779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 382
Match NameE-valueIdentityDescription
PSMR_METMA1.406e-4042.86Proteasome-activating nucleotidase OS=Methanosarci... [more]
RCA1_SCHPO3.132e-4042.27Mitochondrial respiratory chain complexes assembly... [more]
PEX1_HUMAN3.132e-4044.62Peroxisome biogenesis factor 1 OS=Homo sapiens GN=... [more]
PSMR_METTH5.342e-4044.39Proteasome-activating nucleotidase OS=Methanobacte... [more]
FTSH_BACPF6.977e-4041.47Cell division protease ftsH homolog OS=Bacillus ps... [more]
PEX6_YEAST1.554e-3950.00Peroxisomal ATPase PEX6 OS=Saccharomyces cerevisia... [more]
SPA5L_BOVIN2.030e-3936.14Spermatogenesis-associated protein 5-like protein ... [more]
PSMR_UNCMA2.030e-3945.74Proteasome-activating nucleotidase OS=Uncultured m... [more]
RIX7_YEAST4.522e-3938.30Ribosome biogenesis ATPase RIX7 OS=Saccharomyces c... [more]
PSMR_PYRHO4.522e-3943.46Proteasome-activating nucleotidase OS=Pyrococcus h... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-008-E03-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728779 ID=EY728779; Name=EY728779; organism=Citrus sinensis; type=EST; length=853bp
CCACGCGTCCGCTGGGATTTTGATGTTTGGTCCTCCCGNGTTGTAGCAAA
ACCCTCATGGCACGTGCAGTAGCTTCAGAAGCAGGGCTGAACTTCCTTGC
AGTGAAGGGTCCAGAGCTTTTTAGCAAATGGGTTGGTGAATCCGAGAAAG
CAGTGCGATCGCTGTTTGCAAAGGCTAGGGCCAATGCTCCATCAATCATA
TTTTTTGATGAAATTGATGGTCTTGCTGCCATTCGTGGGAAGGAAAGTGA
TGGGGTTTCTGTTTCTGATCGGGTTATGAGTCAACTTCTTGTTGAATTGG
ATGGCCTGCATCAAAGAGTTAATGTTACTGTTATTGCTGCTACAAATCGA
CCAGACAAGATTGATCCTGCCCTGTTGCGACCAGGACGCTTTGACAGGCT
TCTGTATGTGGGACCTCCAAATGAGACTGACCGAGAAGAAATATTCCGAA
TTCATTTGCGTAAAATTCCTTGCAGCTCTGATGTAAACATAAGAGAACTG
GCTTGCCTCTCAGAAGGCTGTACTGGGGCTGATATATCATTAATCTGCCG
AGAGGCAGCCATTTCAGCCATTGAGGAGAACCTCGATGCATCAAGAATAA
CAATGCAACACTTGAAGACTGCAATTAGACACGTACAACCATCGGAGATT
CATTCTTANCAGGAGCTCTCAGCTAAGTCCAAAGGCTTGTACACTCTAAT
GCGGAGGCTGATGAATCANGATATCACCTGCGCCCGAATAAATCATCGGA
TTGAATATGTGGTCCCTAATAAATCCATNGCACTGTTCCTATGTCGCTTC
CCAGCAGGCCTCTCACAATCAAAGTCTGGTTCAACCGGGTACTAAAGTTG
TCT
back to top