EY728779

Overview
NameEY728779
Unique NameEY728779
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728779 vs. ExPASy Swiss-Prot
Match: PRS8_XENLA (26S protease regulatory subunit 8 OS=Xenopus laevis GN=psmc5 PE=2 SV=2)

HSP 1 Score: 155.992 bits (393), Expect = 2.481e-37
Identity = 92/235 (39.15%), Postives = 129/235 (54.89%), Query Frame = 3
Query:   36 PXCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSXQELSAKSKGLYTLMRRLMNXDITCARI 740
            P   KTL+ARAVA      F+ V G EL  K++GE  + VR LF  AR +APSIIF DEID + +     S G S   R M +LL +LDG     N+ VI ATNR D +D ALLRPGR DR +   PPNE  R +I +IH RK+  +  +N+R++A L  G +GA++  +C EA + A+ E      +T +  + A+  V        Q+ S K+  +  L +      I C+ +
Sbjct:  187 PGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRER--RVHVTQEDFEMAVAKVM-------QKDSEKNMSIKKLWKCFFLVPILCSTV 412          
BLAST of EY728779 vs. ExPASy Swiss-Prot
Match: PSMR_SULTO (Proteasome-activating nucleotidase OS=Sulfolobus tokodaii GN=pan PE=3 SV=2)

HSP 1 Score: 155.606 bits (392), Expect = 3.241e-37
Identity = 90/202 (44.55%), Postives = 120/202 (59.41%), Query Frame = 3
Query:   36 PXCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIR-GKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQ 638
            P   KTL+A+AVA+E+   F+ V   E   K+VGE  + VR +F  AR  APSI+F DEID + A R    + G     R + QLL E+DG     NV +IAATNR D +DPALLRPGRFDRL+ V  PN   R+EIFRI+L+K+    ++    LA ++EG +GA+I  +C EA   AI        + M  L TAI  ++
Sbjct:  177 PGTGKTLLAKAVATESNATFIQVVASEFAQKFVGEGARIVREVFELARRKAPSIVFIDEIDAIGAKRVDMGTSGEREIQRTLMQLLAEIDGFKPLDNVKIIAATNRLDILDPALLRPGRFDRLIEVPLPNFEGRKEIFRIYLQKMKTDGNIRYDILASMTEGFSGAEIKNVCTEAGYIAIRNG--RKYVNMTDLITAIEKIK 376          
BLAST of EY728779 vs. ExPASy Swiss-Prot
Match: FTSH3_ARATH (Cell division protease ftsH homolog 3, mitochondrial OS=Arabidopsis thaliana GN=FTSH3 PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 3.241e-37
Identity = 86/203 (42.36%), Postives = 123/203 (60.59%), Query Frame = 3
Query:   36 PXCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES-DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNI--RELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHV 635
            P   KTL+A+A A E+G+ FL++ G +    +VG     VR LF +AR  APSIIF DEID +   RG+    G    +  ++QLLVE+DG      V V+A TNRPD +D ALLRPGRFDR + +  P+   R++IF+I+L+KI    + +   + LA L+ G  GADI+ +C EAA+ A     + + +TM H ++AI  V
Sbjct:  364 PGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRHLFQEARQAAPSIIFIDEIDAIGRARGRGGLGGNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFKIYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARH--EGATVTMAHFESAIDRV 564          
BLAST of EY728779 vs. ExPASy Swiss-Prot
Match: PSMR_METM5 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=pan PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 4.233e-37
Identity = 86/201 (42.79%), Postives = 123/201 (61.19%), Query Frame = 3
Query:   36 PXCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHV 635
            P   KTL+A+AVA E   +F+ V G EL  K++GE  K VR +F  A+  +P IIF DEID +A+ R +  + G     R + QLL E+DG   R +V +IAATNRPD +DPA+LRPGRFDR++ +  P+E  R +I +IH  K+     V++RE+A ++E   GAD+  +C EA + AI E  +   I M   + AI  +
Sbjct:  191 PGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLDILKIHTEKMNLKG-VDLREVAKIAENMVGADLKAVCTEAGMFAIRE--EREFIKMDDFREAITKI 388          
BLAST of EY728779 vs. ExPASy Swiss-Prot
Match: PEX6_ASHGO (Peroxisomal biogenesis factor 6 OS=Ashbya gossypii GN=PEX6 PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.528e-37
Identity = 86/182 (47.25%), Postives = 118/182 (64.84%), Query Frame = 3
Query:   36 PXCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVN-VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE-EIFRIHLRKIPCSSDVNIRELACLSE-GCTGADISLICREAAISAI 572
            P   KTL+A+AVA+   LNF +VKGPEL + ++GESE  VR +F +AR   P +IFFDE+D +A  RG + D   V DR++SQLL ELDGL    + + VI ATNRPD +D ALLRPGRFD+LLY+G  +  +++  I R   RK     DV++ +LA       TGAD   +C +A ++A+
Sbjct:  765 PGTGKTLLAKAVATNFSLNFFSVKGPELLNMYIGESEANVRRVFQRARDAKPCVIFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGLSTGGDGLFVIGATNRPDLLDEALLRPGRFDKLLYLGISDTNEKQANILRALTRKFTLDPDVSLDDLAASCPFTYTGADFYALCSDAMLNAM 946          
BLAST of EY728779 vs. ExPASy Swiss-Prot
Match: PRS8_RAT (26S protease regulatory subunit 8 OS=Rattus norvegicus GN=Psmc5 PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 7.220e-37
Identity = 90/215 (41.86%), Postives = 125/215 (58.14%), Query Frame = 3
Query:   36 PXCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSXQELSAK 677
            P   KTL+ARAVA      F+ V G EL  K++GE  + VR LF  AR +APSIIF DEID + + R +  S G S   R M +LL +LDG     N+ VI ATNR D +D ALLRPGR DR +   PPNE  R +I +IH RK+  +  +N+R++A L  G +GA++  +C EA + A+ E      +T +  + A+  V   +  S + +S K
Sbjct:  192 PGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRER--RVHVTQEDFEMAVAKVMQKD--SEKNMSIK 402          
BLAST of EY728779 vs. ExPASy Swiss-Prot
Match: PRS8_PIG (26S protease regulatory subunit 8 OS=Sus scrofa GN=PSMC5 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 7.220e-37
Identity = 90/215 (41.86%), Postives = 125/215 (58.14%), Query Frame = 3
Query:   36 PXCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSXQELSAK 677
            P   KTL+ARAVA      F+ V G EL  K++GE  + VR LF  AR +APSIIF DEID + + R +  S G S   R M +LL +LDG     N+ VI ATNR D +D ALLRPGR DR +   PPNE  R +I +IH RK+  +  +N+R++A L  G +GA++  +C EA + A+ E      +T +  + A+  V   +  S + +S K
Sbjct:  192 PGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRER--RVHVTQEDFEMAVAKVMQKD--SEKNMSIK 402          
BLAST of EY728779 vs. ExPASy Swiss-Prot
Match: PRS8_MOUSE (26S protease regulatory subunit 8 OS=Mus musculus GN=Psmc5 PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 7.220e-37
Identity = 90/215 (41.86%), Postives = 125/215 (58.14%), Query Frame = 3
Query:   36 PXCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSXQELSAK 677
            P   KTL+ARAVA      F+ V G EL  K++GE  + VR LF  AR +APSIIF DEID + + R +  S G S   R M +LL +LDG     N+ VI ATNR D +D ALLRPGR DR +   PPNE  R +I +IH RK+  +  +N+R++A L  G +GA++  +C EA + A+ E      +T +  + A+  V   +  S + +S K
Sbjct:  192 PGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRER--RVHVTQEDFEMAVAKVMQKD--SEKNMSIK 402          
BLAST of EY728779 vs. ExPASy Swiss-Prot
Match: PRS8_HUMAN (26S protease regulatory subunit 8 OS=Homo sapiens GN=PSMC5 PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 7.220e-37
Identity = 90/215 (41.86%), Postives = 125/215 (58.14%), Query Frame = 3
Query:   36 PXCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSXQELSAK 677
            P   KTL+ARAVA      F+ V G EL  K++GE  + VR LF  AR +APSIIF DEID + + R +  S G S   R M +LL +LDG     N+ VI ATNR D +D ALLRPGR DR +   PPNE  R +I +IH RK+  +  +N+R++A L  G +GA++  +C EA + A+ E      +T +  + A+  V   +  S + +S K
Sbjct:  192 PGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRER--RVHVTQEDFEMAVAKVMQKD--SEKNMSIK 402          
BLAST of EY728779 vs. ExPASy Swiss-Prot
Match: PRS8_BOVIN (26S protease regulatory subunit 8 OS=Bos taurus GN=PSMC5 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 7.220e-37
Identity = 90/215 (41.86%), Postives = 125/215 (58.14%), Query Frame = 3
Query:   36 PXCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSXQELSAK 677
            P   KTL+ARAVA      F+ V G EL  K++GE  + VR LF  AR +APSIIF DEID + + R +  S G S   R M +LL +LDG     N+ VI ATNR D +D ALLRPGR DR +   PPNE  R +I +IH RK+  +  +N+R++A L  G +GA++  +C EA + A+ E      +T +  + A+  V   +  S + +S K
Sbjct:  192 PGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRER--RVHVTQEDFEMAVAKVMQKD--SEKNMSIK 402          
The following BLAST results are available for this feature:
BLAST of EY728779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 382
Match NameE-valueIdentityDescription
PRS8_XENLA2.481e-3739.1526S protease regulatory subunit 8 OS=Xenopus laevi... [more]
PSMR_SULTO3.241e-3744.55Proteasome-activating nucleotidase OS=Sulfolobus t... [more]
FTSH3_ARATH3.241e-3742.36Cell division protease ftsH homolog 3, mitochondri... [more]
PSMR_METM54.233e-3742.79Proteasome-activating nucleotidase OS=Methanococcu... [more]
PEX6_ASHGO5.528e-3747.25Peroxisomal biogenesis factor 6 OS=Ashbya gossypii... [more]
PRS8_RAT7.220e-3741.8626S protease regulatory subunit 8 OS=Rattus norveg... [more]
PRS8_PIG7.220e-3741.8626S protease regulatory subunit 8 OS=Sus scrofa GN... [more]
PRS8_MOUSE7.220e-3741.8626S protease regulatory subunit 8 OS=Mus musculus ... [more]
PRS8_HUMAN7.220e-3741.8626S protease regulatory subunit 8 OS=Homo sapiens ... [more]
PRS8_BOVIN7.220e-3741.8626S protease regulatory subunit 8 OS=Bos taurus GN... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-008-E03-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728779 ID=EY728779; Name=EY728779; organism=Citrus sinensis; type=EST; length=853bp
CCACGCGTCCGCTGGGATTTTGATGTTTGGTCCTCCCGNGTTGTAGCAAA
ACCCTCATGGCACGTGCAGTAGCTTCAGAAGCAGGGCTGAACTTCCTTGC
AGTGAAGGGTCCAGAGCTTTTTAGCAAATGGGTTGGTGAATCCGAGAAAG
CAGTGCGATCGCTGTTTGCAAAGGCTAGGGCCAATGCTCCATCAATCATA
TTTTTTGATGAAATTGATGGTCTTGCTGCCATTCGTGGGAAGGAAAGTGA
TGGGGTTTCTGTTTCTGATCGGGTTATGAGTCAACTTCTTGTTGAATTGG
ATGGCCTGCATCAAAGAGTTAATGTTACTGTTATTGCTGCTACAAATCGA
CCAGACAAGATTGATCCTGCCCTGTTGCGACCAGGACGCTTTGACAGGCT
TCTGTATGTGGGACCTCCAAATGAGACTGACCGAGAAGAAATATTCCGAA
TTCATTTGCGTAAAATTCCTTGCAGCTCTGATGTAAACATAAGAGAACTG
GCTTGCCTCTCAGAAGGCTGTACTGGGGCTGATATATCATTAATCTGCCG
AGAGGCAGCCATTTCAGCCATTGAGGAGAACCTCGATGCATCAAGAATAA
CAATGCAACACTTGAAGACTGCAATTAGACACGTACAACCATCGGAGATT
CATTCTTANCAGGAGCTCTCAGCTAAGTCCAAAGGCTTGTACACTCTAAT
GCGGAGGCTGATGAATCANGATATCACCTGCGCCCGAATAAATCATCGGA
TTGAATATGTGGTCCCTAATAAATCCATNGCACTGTTCCTATGTCGCTTC
CCAGCAGGCCTCTCACAATCAAAGTCTGGTTCAACCGGGTACTAAAGTTG
TCT
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