EY728774

Overview
NameEY728774
Unique NameEY728774
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length891
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728774 vs. ExPASy Swiss-Prot
Match: FLIF_BRUAB (Flagellar M-ring protein OS=Brucella abortus GN=fliF PE=3 SV=3)

HSP 1 Score: 108.997 bits (271), Expect = 3.770e-23
Identity = 70/186 (37.63%), Postives = 101/186 (54.30%), Query Frame = -1
Query:    1 MVGLAASVAIGFAVVLWSQQPDYRPLYGSLAGMDSKQIMETLAAADIGYTVEPNSGALLVKADDVARARMKLAAAGVTPSDANIGFEILDKDQGLGTSQFMEATRYRRGLEGELARTISALNNVKGARVHLAIPKSSVFVRDERKPSASVLVELFAGRSLEPGQVLAIINLVATSVPELSKSQITV 558
            +VG A   AI +  + +  +P Y  LY  L+  D  ++   L  A I + V+ +  ++LV       ARM LA  G+ P+  N G+E+ D    LG + FM+     R LEGE+ARTI A+  VK ARVH+ + +   F R ++KPSASV++    G S E  Q  +I  LVA +VP L  S +TV
Sbjct:   34 LVGAALMGAILYTSI-YLGRPSYETLYVGLSRDDVNRMGLALGEAGIPFDVKSDGSSILVPIGKAENARMYLAEKGL-PTSNNAGYELFDNMGSLGLTSFMQEITRVRALEGEIARTIQAIRGVKAARVHIVLAEKGSFRRGDQKPSASVVIRAEGGFSAESAQ--SIRQLVAAAVPSLDASSVTV 215          
BLAST of EY728774 vs. ExPASy Swiss-Prot
Match: FLIF_RHIME (Flagellar M-ring protein OS=Rhizobium meliloti GN=fliF PE=3 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 4.924e-23
Identity = 66/189 (34.92%), Postives = 105/189 (55.56%), Query Frame = -1
Query:    1 LMVGLAASVAIGFAVV--LWSQQPDYRPLYGSLAGMDSKQIMETLAAADIGYTVEPNSGALLVKADDVARARMKLAAAGVTPSDANIGFEILDKDQGLGTSQFMEATRYRRGLEGELARTISALNNVKGARVHLAIPKSSVFVRDERKPSASVLVELFAGRSLEPGQVLAIINLVATSVPELSKSQITV 561
            + + +A  VAIGF +   ++  +P +  LY  L   D  QI   LA A++ + V  + G++ V      +AR+ LA  G+ PS AN G+E+ D    LG + FM+     R LEGE+ARTI  ++ +  ARVH+ +P+   F + E+ P+ASV++   A  ++      +I +LVA+SVP L    +TV
Sbjct:   23 IALAVAGVVAIGFVLGAGIYVNRPSFETLYVGLERSDVTQISIALAEANVDFEVGTDGGSIQVPVGMTGKARLLLAERGL-PSSANAGYELFDNVGSLGLTSFMQEVTRVRALEGEIARTIQQISGIAAARVHIVMPERGSFRKAEQTPTASVMIR--ASATVGRSAASSIRHLVASSVPGLDVDDVTV 208          
BLAST of EY728774 vs. ExPASy Swiss-Prot
Match: FLIF_CAUCR (Flagellar M-ring protein OS=Caulobacter crescentus GN=fliF PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.924e-23
Identity = 64/187 (34.22%), Postives = 104/187 (55.61%), Query Frame = -1
Query:    1 MVGLAASV-AIGFAVVLWSQQPDYRPLYGSLAGMDSKQIMETLAAADIGYTVEPNSGALLVKADDVARARMKLAAAGVTPSDANIGFEILDKDQGLGTSQFMEATRYRRGLEGELARTISALNNVKGARVHLAIPKSSVFVRDERKPSASVLVELFAGRSLEPGQVLAIINLVATSVPELSKSQITV 558
            M+G+ A V A+  A+V++  +     LY +L   ++ ++ + L  A I Y  + +   ++V  D VA AR+ +A  G+  S  +IG+EI D +  LG + F++    +R L+GEL RTI A+  V   RVHL +PK  +F  D  +PSA+V + +   R      V AI NLV++SVP +   ++ V
Sbjct:    1 MLGVGAGVVAVLVALVMFMGKEPSELLYSNLDLKEASEVTQALDQAGIKYETKGDGSTIMVPRDKVASARLMVAGKGLV-SSGSIGYEIFDTNNALGQTDFVQQLNRQRALQGELERTIKAMQGVNSVRVHLVLPKRQLFEEDAEQPSAAVTIGV-GSREPSSDMVRAIQNLVSSSVPNMKAEKVAV 185          
BLAST of EY728774 vs. ExPASy Swiss-Prot
Match: FLIF_BACSU (Flagellar M-ring protein OS=Bacillus subtilis GN=fliF PE=3 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 4.935e-15
Identity = 49/193 (25.39%), Postives = 102/193 (52.85%), Query Frame = -1
Query:    1 LRQVGLMVGLAASVAIGFAVVLWSQQPDYRPLYGSLAGMDSKQIMETLAAADIGYTVEPNSGALLVKADDVARARMKLAAAGVTPSDANIGFEILDKDQGLGTSQFMEATRYRRGLEGELARTISALNNVKGARVHLAIPKSSVFVRDERK-PSASVLVELFAGRSLEPGQVLAIINLVATSVPELSKSQITV 576
            L+++ ++  LAA + IG  + +++      PLY  L+  ++ QI E L A  +   +      + V  D V   ++++AA G+ P   +I +    ++ G G +         +  + EL+  I+ ++ +K ++V + +PK +VFV +E+   SAS+++++  G +L+  Q+  + +LV+ SVP L +  I +
Sbjct:   22 LQKILMVSALAAIIIIGIIISVFASNSKMAPLYKDLSAEEAGQIKEELDAKKVPNELSNGGTVISVPEDQVDSLKVQMAAEGL-PKTGSIDYSFFGQNAGFGLTDNEFDMVKVKATQTELSNLINEMDGIKNSKVMINLPKDAVFVGEEQSAASASIVLQIQPGYTLDQSQINGLYHLVSKSVPNLKEDNIVI 213          
The following BLAST results are available for this feature:
BLAST of EY728774 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
FLIF_BRUAB3.770e-2337.63Flagellar M-ring protein OS=Brucella abortus GN=fl... [more]
FLIF_RHIME4.924e-2334.92Flagellar M-ring protein OS=Rhizobium meliloti GN=... [more]
FLIF_CAUCR4.924e-2334.22Flagellar M-ring protein OS=Caulobacter crescentus... [more]
FLIF_BACSU4.935e-1525.39Flagellar M-ring protein OS=Bacillus subtilis GN=f... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-008-D08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728774 ID=EY728774; Name=EY728774; organism=Citrus sinensis; type=EST; length=891bp
CACGGTGATTTGCGACTTGCTCAATTCGGGAACGCTGGTGGCCACCAGGT
TGATGATCGCCAACACCTGGCCAGGCTCCAGGGAGCGGCCGGCAAACAGC
TCGACCAGTACCGAGGCGCTGGGCTTGCGCTCGTCGCGTACAAACACCGA
GCTTTTCGGAATCGCCAGGTGCACGCGGGCGCCCTTGACGTTGTTCAACG
CAGAAATAGTCCGCGCCAGCTCGCCTTCCAGGCCACGACGGTAGCGGGTG
GCTTCCATGAACTGGCTGGTACCCAGGCCTTGGTCCTTGTCGAGGATTTC
AAAGCCGATATTGGCGTCGGAAGGAGTGACGCCGGCCGCAGCCAGCTTCA
TCCGCGCACGGGCCACATCATCGGCCTTGACCAACAGGGCGCCGGAATTC
GGTTCGACGGTGTAGCCGATGTCGGCTGCTGCCAGGGTTTCCATGATCTG
CTTGGAATCCATGCCCGCGAGACTGCCATACAGCGGGCGGTAATCCGGTT
GCTGGGACCACAGCACCACGGCAAAACCAATCGCCACGCTGGCAGCCAGG
CCGACCATCAGGCCCACCTGACGCAGCATGGTCTCTCNNGAGAGGGTTTC
CANGAACGACAGGCCAAACAGCGGCGGCTTGCCGTCTGCCTTGGCGGGTG
CGTTATCCACGACTGCTTCTGCCATGACTCAAATCGTCCTTAAACCGGCA
TCTGCATGATGTCTGGATAGGCTTGAACCACCTTGTTGGCGCACCTGGGT
CAGGCCTGGAATGAAACGCTGGCTTTTGGCAGGCGAACTCACTTCGGGGA
GGTCCCGCCGGTTTTGCGGCTCCCAAGGGGTGGCAAGATGGAGCGCTGGG
TCATGAGGTGATGCTGCACCTTGCCCAATCGGGCCGCGGGC
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