EY728772

Overview
NameEY728772
Unique NameEY728772
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length854
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5177 contig Csv1_Contig5177:24..880. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY728772 vs. ExPASy Swiss-Prot
Match: UBA1_YEAST (Ubiquitin-activating enzyme E1 1 OS=Saccharomyces cerevisiae GN=UBA1 PE=1 SV=2)

HSP 1 Score: 253.062 bits (645), Expect = 1.500e-66
Identity = 132/284 (46.48%), Postives = 185/284 (65.14%), Query Frame = 1
Query:   13 QISVFGAKLQKKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQXXXXXXXXXXXXINPRLN--IEALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESGTLGAKCNTQMVIPHLTENYGASRDPPEKQAPMCTVHSFPHNIDHCLTWARSEFEGLLEKTPAEVNAYLSTQLNNYFYG*CR*CSS*RILGTCP*V--PLTGEVRNIPGLHHLGSXSV*RLFFHRVKQLIFTFPEEA 852
            QI+VFG   QKK+ ++KVF+VGSGA+GCE LKN AL+G+  G+ G + +TD+D IEKSNL+RQFLFR  ++G+            +NP L   I A  ++VGPETE +F+D+FWE++  V NALDNV+AR YVD+RC++++KPLLESGTLG K NTQ++IP LTE+Y +SRDPPEK  P+CT+ SFP+ IDH + WA+S F+G    +   VN YL+    N+     +   S  + G    +   L+ +  N             + F H +KQL+F FP++A
Sbjct:  420 QIAVFGLDFQKKIANSKVFLVGSGAIGCEMLKNWALLGLGSGSDGYIVVTDNDSIEKSNLNRQFLFRPKDVGKNKSEVAAEAVCAMNPDLKGKINAKIDKVGPETEEIFNDSFWESLDFVTNALDNVDARTYVDRRCVFYRKPLLESGTLGTKGNTQVIIPRLTESYSSSRDPPEKSIPLCTLRSFPNKIDHTIAWAKSLFQGYFTDSAENVNMYLTQP--NFVEQTLK--QSGDVKGVLESISDSLSSKPHNFEDCIKWARLEFEKKFNHDIKQLLFNFPKDA 699          
BLAST of EY728772 vs. ExPASy Swiss-Prot
Match: UBA1_DICDI (Ubiquitin-like modifier-activating enzyme 1 OS=Dictyostelium discoideum GN=uba1 PE=3 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 7.839e-66
Identity = 114/215 (53.02%), Postives = 154/215 (71.63%), Query Frame = 1
Query:   13 QISVFGAKLQKKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQXXXXXXXXXXXXINPRLNIEALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESGTLGAKCNTQMVIPHLTENYGASRDPPEKQAPMCTVHSFPHNIDHCLTWARSEFEGLLEKTPAEVNAYLS 657
            QI  FG  LQ K+E+   F+VG+GA+GCE LKN A+MG+  G +G + +TD D IEKSNL+RQFLFR  +I Q            +NP LN++A   RVGP+TE+ +++ F+ ++  V NALDNV ARLY+D +C+Y+ KPLLESGTLG K NTQ+V+PHLTE+Y +SRDPPEK  P+CT+H+FP+ I+H + WAR  FEGL +     VN+YL+
Sbjct:  414 QIITFGKTLQNKIENLNYFLVGAGAIGCEMLKNFAMMGLGAGPKGLVHVTDMDTIEKSNLNRQFLFRSSDIQQLKSQTAANAVRVMNPDLNVKAYSLRVGPDTESHYNEEFFNSLDGVCNALDNVEARLYMDSQCVYYGKPLLESGTLGTKGNTQVVVPHLTESYSSSRDPPEKGIPVCTLHNFPNAIEHTIQWARDTFEGLFKNNADNVNSYLT 628          

HSP 2 Score: 31.187 bits (69), Expect = 7.839e-66
Identity = 12/31 (38.71%), Postives = 17/31 (54.84%), Query Frame = 2
Query:  761 FQDCITWARSQFEDYFSTEXXXXXXHFLKKL 853
            F  CI WAR +FE+YF+        +F K +
Sbjct:  662 FNQCIAWARLKFEEYFNNNIEQLLYNFPKDM 692          
BLAST of EY728772 vs. ExPASy Swiss-Prot
Match: UBA6_MOUSE (Ubiquitin-like modifier-activating enzyme 6 OS=Mus musculus GN=Uba6 PE=2 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 5.224e-52
Identity = 99/209 (47.37%), Postives = 139/209 (66.51%), Query Frame = 1
Query:   28 GAKLQKKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQ-GKLTITDDDVIEKSNLSRQFLFRDWNIGQXXXXXXXXXXXXINPRLNIEALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESGTLGAKCNTQMVIPHLTENYGASRDPPEKQAPMCTVHSFPHNIDHCLTWARSEFEGLLEKTPAEVNAY 651
            G  L +KL++  +F+VG GA+GCE LKN AL+GV  G + G +T+TD D+IEKSNL+RQFLFR  +I +            INP+L I+A  N+V P TE+++ D F+     +I ALDNV AR YVD RCL   +PLL+SGT+G K +T++++P LTE+Y + RDPPE++ P CT+ SFP  I+H + WAR +FE      P+  N +
Sbjct:  451 GNTLCQKLQNLNIFLVGCGAIGCEMLKNFALLGVGTGREKGMVTVTDPDLIEKSNLNRQFLFRPHHIQKPKSYTAAEATLKINPQLKIDAHLNKVCPATESIYSDEFYTKQDIIITALDNVEARRYVDSRCLANLRPLLDSGTMGTKGHTEIIVPQLTESYNSHRDPPEEEIPFCTLKSFPAAIEHTIQWARDKFESSFSHKPSLFNKF 659          

HSP 2 Score: 22.7126 bits (47), Expect = 5.224e-52
Identity = 12/39 (30.77%), Postives = 22/39 (56.41%), Query Frame = 2
Query:  695 DAQAKEYLERVLECL*QEKCEIFQDCITWARSQFEDYFS 811
            + Q+ E   +V++ L   +  I+  C+  AR +FE YF+
Sbjct:  675 NGQSLEGCFQVIKLL-SRRPRIWSQCVELARLKFEKYFN 712          
BLAST of EY728772 vs. ExPASy Swiss-Prot
Match: UBA6_HUMAN (Ubiquitin-like modifier-activating enzyme 6 OS=Homo sapiens GN=UBA6 PE=1 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 3.037e-51
Identity = 98/212 (46.23%), Postives = 139/212 (65.57%), Query Frame = 1
Query:   28 GAKLQKKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQ-GKLTITDDDVIEKSNLSRQFLFRDWNIGQXXXXXXXXXXXXINPRLNIEALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESGTLGAKCNTQMVIPHLTENYGASRDPPEKQAPMCTVHSFPHNIDHCLTWARSEFEGLLEKTPAEVNAYLST 660
            G  L +KL++  +F+VG GA+GCE LKN AL+GV    + G +T+TD D+IEKSNL+RQFLFR  +I +            IN ++ I+A  N+V P TE +++D F+     +I ALDNV AR YVD RCL   +PLL+SGT+G K +T++++PHLTE+Y + RDPPE++ P CT+ SFP  I+H + WAR +FE      P+  N +  T
Sbjct:  451 GDTLCQKLQNLNIFLVGCGAIGCEMLKNFALLGVGTSKEKGMITVTDPDLIEKSNLNRQFLFRPHHIQKPKSYTAADATLKINSQIKIDAHLNKVCPTTETIYNDEFYTKQDVIITALDNVEARRYVDSRCLANLRPLLDSGTMGTKGHTEVIVPHLTESYNSHRDPPEEEIPFCTLKSFPAAIEHTIQWARDKFESSFSHKPSLFNKFWQT 662          
BLAST of EY728772 vs. ExPASy Swiss-Prot
Match: UBA7_HUMAN (Ubiquitin-like modifier-activating enzyme 7 OS=Homo sapiens GN=UBA7 PE=1 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 2.895e-43
Identity = 93/217 (42.86%), Postives = 125/217 (57.60%), Query Frame = 1
Query:   13 QISVFGAKLQKKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQXXXXXXXXXXXXINPRLNIEALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESGTLGAKCNTQMVIPHLTENY------GASRDPPEKQAPMCTVHSFPHNIDHCLTWARSEFEGLLEKTPAEVN 645
            QI+VFGA  Q+KL      +VG+GA+GCE LK  AL+G+  GN G LT+ D D IE+SNLSRQFLFR  ++G+            +NP L +  L   + P TE+++ D F+  +  V  ALD+  AR YV  RC ++ KPLLE+GT G   +  + +PH+TE Y       AS D P    P+CTV  FP   +H L WAR EFE L   +   +N
Sbjct:  418 QIAVFGAGFQEKLRRQHYLLVGAGAIGCELLKVFALVGLGAGNSGGLTVVDMDHIERSNLSRQFLFRSQDVGRPKAEVAAAAARGLNPDLQVIPLTYPLDPTTEHIYGDNFFSRVDGVAAALDSFQARRYVAARCTHYLKPLLEAGTSGTWGSATVFMPHVTEAYRAPASAAASEDAP---YPVCTVRYFPSTAEHTLQWARHEFEELFRLSAETIN 631          

HSP 2 Score: 25.7942 bits (55), Expect = 2.895e-43
Identity = 16/56 (28.57%), Postives = 27/56 (48.21%), Query Frame = 2
Query:  674 TSMANAGDAQAKEYLERVLECL*QEKCEIFQDCITWARSQFEDYFSTEXXXXXXHF 841
            TS+A+  + Q    L+ VL  L + + + +QDC+ WA   ++  F         HF
Sbjct:  638 TSLADMDEPQTLTLLKPVLGVL-RVRPQNWQDCVAWALGHWKLCFHYGIKQLLRHF 692          
BLAST of EY728772 vs. ExPASy Swiss-Prot
Match: UBA2_SCHPO (Ubiquitin-activating enzyme E1-like OS=Schizosaccharomyces pombe GN=uba2 PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.242e-28
Identity = 70/189 (37.04%), Postives = 104/189 (55.03%), Query Frame = 1
Query:   43 KKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQXXXXXXXXXXXXINPRLNIEALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESGTLGAKCNTQMVIPHLTENYGASRDPPEKQAPMCTVHSFPHNIDHCLTWARSEF 609
            +  + AKV +VG+G +GCE LKN+ + GV      ++ I D D I+ SNL+RQFLFR  ++ Q             NP + +EA    +    E+ F+  ++     V NALDN++AR +V+++CL    PL+ESGT G     Q++I   TE Y  +   P K  P+CT+ S P    HC+ WA+S F
Sbjct:   21 RNFKSAKVLLVGAGGIGCELLKNLLMSGVK-----EVHIIDLDTIDLSNLNRQFLFRKKHVKQPKAIVAAKTASSFNPNVKLEAYHANI---KEDRFNVAWFRQFDLVFNALDNLDARRHVNKQCLLASVPLIESGTTGFLGQVQVIIHGKTECYDCNPKEPPKTYPVCTIRSTPSQPIHCVVWAKSYF 201          
BLAST of EY728772 vs. ExPASy Swiss-Prot
Match: UBE1Y_MACRU (Ubiquitin-activating enzyme E1 Y (Fragment) OS=Macropus rufus GN=UBE1Y PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 8.327e-26
Identity = 49/87 (56.32%), Postives = 67/87 (77.01%), Query Frame = 1
Query:  397 LYVDQRCLYFQKPLLESGTLGAKCNTQMVIPHLTENYGASRDPPEKQAPMCTVHSFPHNIDHCLTWARSEFEGLLEKTPAEVNAYLS 657
            +Y+D+ C+Y++KPLLESGTLG K N Q+VIP LTE+Y +S+DPPEK  P+CT+ +FP+ I+H L WAR EFE L ++    VN YL+
Sbjct:    1 MYMDRHCVYYRKPLLESGTLGTKGNIQVVIPFLTESYSSSQDPPEKSIPICTLKNFPNAIEHTLQWARDEFESLFKQPAENVNQYLT 87          

HSP 2 Score: 25.0238 bits (53), Expect = 8.327e-26
Identity = 12/31 (38.71%), Postives = 16/31 (51.61%), Query Frame = 2
Query:  692 GDAQAKEYLERVLECL*QEKCEIFQDCITWA 784
            G  Q  E LE V   L  ++   + DC+TWA
Sbjct:   99 GGTQPLEVLEAVHRSLVLQRPHDWADCVTWA 129          
BLAST of EY728772 vs. ExPASy Swiss-Prot
Match: SAE2_MOUSE (SUMO-activating enzyme subunit 2 OS=Mus musculus GN=Uba2 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.856e-24
Identity = 67/202 (33.17%), Postives = 103/202 (50.99%), Query Frame = 1
Query:   34 KLQKKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQXXXXXXXXXXXXINPRLNIEALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESGTLGAKCNTQMVIPHLTENYGASRDPPEKQAPMCTVHSFPHNIDHCLTWARSEFEGLLEKTPAE 639
            +L + +   +V +VG+G +GCE LKN+ L G S      + + D D I+ SNL+RQFLF+  ++G+             +P+ NIEA  + +     NV    F+     V+NALDN  AR +V++ CL    PL+ESGT G       +   +TE Y     P ++  P CT+ + P    HC+ WA+  F  L  +  A+
Sbjct:   10 ELAEAVSGGRVLVVGAGGIGCELLKNLVLTGFS-----HIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFHPQANIEAHHDSIMNPDYNV---EFFRQFILVMNALDNRAARNHVNRMCLAADVPLIESGTAGYLGQVTTIKKGVTECYECHPKPTQRTFPGCTIRNTPSEPIHCIVWAKYLFNQLFGEEDAD 203          
BLAST of EY728772 vs. ExPASy Swiss-Prot
Match: SAE2_XENTR (SUMO-activating enzyme subunit 2 OS=Xenopus tropicalis GN=uba2 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.423e-24
Identity = 69/208 (33.17%), Postives = 104/208 (50.00%), Query Frame = 1
Query:   16 ISVFGAKLQKKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQXXXXXXXXXXXXINPRLNIEALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESGTLGAKCNTQMVIPHLTENYGASRDPPEKQAPMCTVHSFPHNIDHCLTWARSEFEGLLEKTPAE 639
            I     +L + +  +++ +VG+G +GCE LKN+ L G        L + D D I+ SNL+RQFLF+  ++G+              P  NI A  + +     NV    F++  T V+NALDN  AR +V++ CL    PL+ESGT G      +V   +TE Y     P +K  P CT+ + P    HC+ WA+  F  L  +  A+
Sbjct:    4 IGALPKELAEAVSTSRLLVVGAGGIGCELLKNLVLTGFI-----NLDVIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFCPEANITAYHDSIMNPDYNV---EFFKQFTMVMNALDNNAARNHVNRMCLAAGIPLIESGTAGYLGQVTVVKKGVTECYECQPKPTQKTFPGCTIRNTPSEPIHCIVWAKYLFNQLFGEEDAD 203          
BLAST of EY728772 vs. ExPASy Swiss-Prot
Match: SAE2_DANRE (SUMO-activating enzyme subunit 2 OS=Danio rerio GN=uba2 PE=1 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 2.423e-24
Identity = 68/202 (33.66%), Postives = 99/202 (49.01%), Query Frame = 1
Query:   34 KLQKKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQXXXXXXXXXXXXINPRLNIEALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESGTLGAKCNTQMVIPHLTENYGASRDPPEKQAPMCTVHSFPHNIDHCLTWARSEFEGLLEKTPAE 639
            +L   L   +V +VG+G +GCE LKN+ L G        + + D D I+ SNL+RQFLF+  ++G+              P  NI A  + +     NV    F+ N   V+NALDN  AR +V++ CL    PL+ESGT G      ++    TE Y     P +K  P CT+ + P    HC+ WA+  F  L  +  A+
Sbjct:   11 QLADSLSSCRVLVVGAGGIGCELLKNLVLTGFK-----NIEVIDLDTIDVSNLNRQFLFQKKHVGKSKAQVAKESVLRFCPSANITAYHDSIMNPDYNV---EFFRNFQLVMNALDNRAARNHVNRMCLAADIPLIESGTAGYLGQVTVIKKGQTECYECQPKPTQKTFPGCTIRNTPSEPIHCIVWAKYLFNQLFGEEDAD 204          
The following BLAST results are available for this feature:
BLAST of EY728772 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
UBA1_YEAST1.500e-6646.48Ubiquitin-activating enzyme E1 1 OS=Saccharomyces ... [more]
UBA1_DICDI7.839e-6653.02Ubiquitin-like modifier-activating enzyme 1 OS=Dic... [more]
UBA6_MOUSE5.224e-5247.37Ubiquitin-like modifier-activating enzyme 6 OS=Mus... [more]
UBA6_HUMAN3.037e-5146.23Ubiquitin-like modifier-activating enzyme 6 OS=Hom... [more]
UBA7_HUMAN2.895e-4342.86Ubiquitin-like modifier-activating enzyme 7 OS=Hom... [more]
UBA2_SCHPO1.242e-2837.04Ubiquitin-activating enzyme E1-like OS=Schizosacch... [more]
UBE1Y_MACRU8.327e-2656.32Ubiquitin-activating enzyme E1 Y (Fragment) OS=Mac... [more]
SAE2_MOUSE1.856e-2433.17SUMO-activating enzyme subunit 2 OS=Mus musculus G... [more]
SAE2_XENTR2.423e-2433.17SUMO-activating enzyme subunit 2 OS=Xenopus tropic... [more]
SAE2_DANRE2.423e-2433.66SUMO-activating enzyme subunit 2 OS=Danio rerio GN... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-008-D05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728772 ID=EY728772; Name=EY728772; organism=Citrus sinensis; type=EST; length=854bp
CCACGCGTCCGACAAATTTCTGTGTTTGGGGCCAAGCTCCAGAAGAAGCT
GGAGGATGCTAAAGTGTTCATTGTAGGATCTGGTGCACTTGGGTGTGAGT
TCTTAAAGAATGTGGCGCTGATGGGAGTTTCATGTGGTAATCAAGGAAAA
CTAACTATTACTGATGATGATGTAATTGAAAAGAGTAACCTTAGTAGGCA
GTTTCTCTTCCGTGATTGGAATATTGGGCAGGCCAAATCCACTGTTGCTG
CTTCTGCTGCTACATCAATAAATCCTCGTCTCAACATTGAAGCTTTGCAA
AATCGTGTGGGTCCTGAAACAGAGAATGTGTTTGATGATACCTTCTGGGA
GAATATAACTTGTGTGATCAATGCATTAGACAATGTTAATGCCAGACTGT
ATGTTGATCAGAGGTGCCTATATTTCCAGAAACCACTTCTTGAGTCGGGG
ACTCTAGGTGCCAAATGCAACACTCAGATGGTCATTCCTCACTTAACTGA
AAACTATGGTGCCTCAAGAGATCCACCCGAGAAACAAGCACCCATGTGCA
CCGTGCACTCATTCCCACACAACATTGACCATTGCTTGACATGGGCCCGT
TCTGAGTTTGAGGGTTTGCTTGAGAAAACTCCTGCCGAAGTGAATGCCTA
TCTATCCACCCAGTTGAATAACTACTTCTATGGCTAATGCAGGTGATGCT
CAAGCTAAAGAATACTTGGAACGTGTCCTTGAGTGCCTTTGACAGGAGAA
GTGCGAAATATTCCAGGACTGCATCACCTGGGCTCGNTCTCAGTTTGAAG
ATTATTTTTCCACCGAGTTAAGCAGTTGATCTTTACATTTCCTGAAGAAG
CTGC
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