EY728735

Overview
NameEY728735
Unique NameEY728735
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length834
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728735 vs. ExPASy Swiss-Prot
Match: TDH_ANADF (L-threonine 3-dehydrogenase OS=Anaeromyxobacter sp. (strain Fw109-5) GN=tdh PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.499e-28
Identity = 75/212 (35.38%), Postives = 116/212 (54.72%), Query Frame = 2
Query:   47 PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG--TGIDVSFDCAGLNKTCQQHWAPLVQVVKVA 673
            PM++GHE  GV++ VG EV+   PGDRV+ E  ++C  C +C+ GR +LC   +      P  GS A  VV PAD  +++PD++  E  A+ +P     H      +  E +VL+ GAGPIG++ +  AR  GA  +V+ DV+DYRL +A+ +GA   V V+       E++  + K +G   G DV  + +G  +  +Q    +    KVA
Sbjct:   59 PMIVGHEYVGVVDAVGGEVEAFHPGDRVSGEGHVTCGFCRNCRAGRRHLCRHTIGVGVNRP--GSFAEYVVIPADNVYRIPDDIPDEVAAIFDPYGNATHTALSFELVGE-DVLVTGAGPIGVMAVSIARHVGARHVVVTDVNDYRLGLARRMGATRAVNVA------REDLRAVMKDLGMKEGFDVGLEMSGNGRAFRQMLEAMNHGAKVA 261          
BLAST of EY728735 vs. ExPASy Swiss-Prot
Match: TDH_SERP5 (L-threonine 3-dehydrogenase OS=Serratia proteamaculans (strain 568) GN=tdh PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.018e-27
Identity = 73/191 (38.22%), Postives = 105/191 (54.97%), Query Frame = 2
Query:   47 PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAG 616
            PMV+GHE  G +  +G EVK    GDRV+ E  I+C  C +C+GGR +LC            GS A  +V PA   FK+PDN+S E  ++ +P    VH     ++  E +VL+ GAGPIG++     +  GA  +VI DV++YRL +A+++G    V VS  NL D+  E+      M  G DV  + +G
Sbjct:   58 PMVVGHEYVGEVVAIGQEVKGFTVGDRVSGEGHITCGHCRNCRGGRTHLCRNTTGVGVNR-PGSFAEYLVIPAFNAFKIPDNISDELASIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGIMAAAVCKHVGARHVVITDVNEYRLDLARKMGVTRAVNVSKENLNDVMAEL-----GMTEGFDVGLEMSG 241          
BLAST of EY728735 vs. ExPASy Swiss-Prot
Match: TDH_COLP3 (L-threonine 3-dehydrogenase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=tdh PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.018e-27
Identity = 75/199 (37.69%), Postives = 111/199 (55.78%), Query Frame = 2
Query:   26 ADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGL 619
            A   V  PMV+GHE AG +  +G EVK    GDRV+ E  I+C  C +C+GGR +LC            GS A  +V PA   FKLPD +S +  ++ +P    VH     ++  E +VLI GAGPIG++    A+  GA  +VI D+++YRL +A+++GA   V VS  +L+D+  ++      M  G DV  + +G+
Sbjct:   51 AQKTVPTPMVVGHEYAGEVVGIGQEVKGFTLGDRVSGEGHITCGHCRNCRGGRTHLCRNTVGVGVNRA-GSFAEYLVIPAYNAFKLPDEISDDLASIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVAKHVGARHVVITDINEYRLDLARKMGATRAVDVSKESLKDVMTDL-----GMTEGFDVGMEMSGV 242          
BLAST of EY728735 vs. ExPASy Swiss-Prot
Match: TDH_ALTMD (L-threonine 3-dehydrogenase OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=tdh PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.330e-27
Identity = 72/192 (37.50%), Postives = 109/192 (56.77%), Query Frame = 2
Query:   47 PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGL 619
            P+V+GHE  G +  +G EVK    GDRV+ E  I+C  C +C+ GR +LC   +        G+ A  +V PA   FK+PDN+S +  ++ +P    VH     ++  E +VLI GAGPIG++    A+  GA  +V+ D++ YRL +AK++GA   V VS  NLQD+ +E+      M  G DV  + +G+
Sbjct:   58 PVVVGHEYVGEVVGMGQEVKGFEVGDRVSGEGHITCGHCRNCRAGRVHLCRNTEGVGVNR-PGAFAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVAKHVGARHVVVTDINPYRLELAKKMGATRTVDVSKENLQDVMDEL-----GMSEGFDVGLEMSGV 242          
BLAST of EY728735 vs. ExPASy Swiss-Prot
Match: TDH_YERPY (L-threonine 3-dehydrogenase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=tdh PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.736e-27
Identity = 74/191 (38.74%), Postives = 105/191 (54.97%), Query Frame = 2
Query:   47 PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAG 616
            PMV+GHE  G +  +G EVK    GDRV+ E  I+C  C +C+GGR +LC            GS A  +V PA   FK+PDN+S E  A+ +P    VH     ++  E +VL+ GAGPIG++     +  GA  +VI DV++YRL +A+++G    V VS  NL D+  E+      M  G DV  + +G
Sbjct:   58 PMVVGHEYVGEVVAIGQEVKGFNIGDRVSGEGHITCGHCRNCRGGRTHLCRNTVGVGVNR-PGSFAEYLVIPAFNAFKIPDNISDELAAIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGIMAAAVCKHVGARHVVITDVNEYRLDLARKMGVTRAVNVSKENLNDVMTEL-----GMTEGFDVGLEMSG 241          
BLAST of EY728735 vs. ExPASy Swiss-Prot
Match: TDH_YERPS (L-threonine 3-dehydrogenase OS=Yersinia pseudotuberculosis GN=tdh PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.736e-27
Identity = 74/191 (38.74%), Postives = 105/191 (54.97%), Query Frame = 2
Query:   47 PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAG 616
            PMV+GHE  G +  +G EVK    GDRV+ E  I+C  C +C+GGR +LC            GS A  +V PA   FK+PDN+S E  A+ +P    VH     ++  E +VL+ GAGPIG++     +  GA  +VI DV++YRL +A+++G    V VS  NL D+  E+      M  G DV  + +G
Sbjct:   58 PMVVGHEYVGEVVAIGQEVKGFNIGDRVSGEGHITCGHCRNCRGGRTHLCRNTVGVGVNR-PGSFAEYLVIPAFNAFKIPDNISDELAAIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGIMAAAVCKHVGARHVVITDVNEYRLDLARKMGVTRAVNVSKENLNDVMTEL-----GMTEGFDVGLEMSG 241          
BLAST of EY728735 vs. ExPASy Swiss-Prot
Match: TDH_YERPP (L-threonine 3-dehydrogenase OS=Yersinia pestis (strain Pestoides F) GN=tdh PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.736e-27
Identity = 74/191 (38.74%), Postives = 105/191 (54.97%), Query Frame = 2
Query:   47 PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAG 616
            PMV+GHE  G +  +G EVK    GDRV+ E  I+C  C +C+GGR +LC            GS A  +V PA   FK+PDN+S E  A+ +P    VH     ++  E +VL+ GAGPIG++     +  GA  +VI DV++YRL +A+++G    V VS  NL D+  E+      M  G DV  + +G
Sbjct:   58 PMVVGHEYVGEVVAIGQEVKGFNIGDRVSGEGHITCGHCRNCRGGRTHLCRNTVGVGVNR-PGSFAEYLVIPAFNAFKIPDNISDELAAIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGIMAAAVCKHVGARHVVIADVNEYRLDLARKMGVTRAVNVSKENLNDVMTEL-----GMTEGFDVGLEMSG 241          
BLAST of EY728735 vs. ExPASy Swiss-Prot
Match: TDH_YERPN (L-threonine 3-dehydrogenase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=tdh PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.736e-27
Identity = 74/191 (38.74%), Postives = 105/191 (54.97%), Query Frame = 2
Query:   47 PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAG 616
            PMV+GHE  G +  +G EVK    GDRV+ E  I+C  C +C+GGR +LC            GS A  +V PA   FK+PDN+S E  A+ +P    VH     ++  E +VL+ GAGPIG++     +  GA  +VI DV++YRL +A+++G    V VS  NL D+  E+      M  G DV  + +G
Sbjct:   58 PMVVGHEYVGEVVAIGQEVKGFNIGDRVSGEGHITCGHCRNCRGGRTHLCRNTVGVGVNR-PGSFAEYLVIPAFNAFKIPDNISDELAAIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGIMAAAVCKHVGARHVVIADVNEYRLDLARKMGVTRAVNVSKENLNDVMTEL-----GMTEGFDVGLEMSG 241          
BLAST of EY728735 vs. ExPASy Swiss-Prot
Match: TDH_YERPG (L-threonine 3-dehydrogenase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=tdh PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.736e-27
Identity = 74/191 (38.74%), Postives = 105/191 (54.97%), Query Frame = 2
Query:   47 PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAG 616
            PMV+GHE  G +  +G EVK    GDRV+ E  I+C  C +C+GGR +LC            GS A  +V PA   FK+PDN+S E  A+ +P    VH     ++  E +VL+ GAGPIG++     +  GA  +VI DV++YRL +A+++G    V VS  NL D+  E+      M  G DV  + +G
Sbjct:   58 PMVVGHEYVGEVVAIGQEVKGFNIGDRVSGEGHITCGHCRNCRGGRTHLCRNTVGVGVNR-PGSFAEYLVIPAFNAFKIPDNISDELAAIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGIMAAAVCKHVGARHVVIADVNEYRLDLARKMGVTRAVNVSKENLNDVMTEL-----GMTEGFDVGLEMSG 241          
BLAST of EY728735 vs. ExPASy Swiss-Prot
Match: TDH_YERPE (L-threonine 3-dehydrogenase OS=Yersinia pestis GN=tdh PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.736e-27
Identity = 74/191 (38.74%), Postives = 105/191 (54.97%), Query Frame = 2
Query:   47 PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAG 616
            PMV+GHE  G +  +G EVK    GDRV+ E  I+C  C +C+GGR +LC            GS A  +V PA   FK+PDN+S E  A+ +P    VH     ++  E +VL+ GAGPIG++     +  GA  +VI DV++YRL +A+++G    V VS  NL D+  E+      M  G DV  + +G
Sbjct:   58 PMVVGHEYVGEVVAIGQEVKGFNIGDRVSGEGHITCGHCRNCRGGRTHLCRNTVGVGVNR-PGSFAEYLVIPAFNAFKIPDNISDELAAIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGIMAAAVCKHVGARHVVIADVNEYRLDLARKMGVTRAVNVSKENLNDVMTEL-----GMTEGFDVGLEMSG 241          
The following BLAST results are available for this feature:
BLAST of EY728735 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 272
Match NameE-valueIdentityDescription
TDH_ANADF3.499e-2835.38L-threonine 3-dehydrogenase OS=Anaeromyxobacter sp... [more]
TDH_SERP51.018e-2738.22L-threonine 3-dehydrogenase OS=Serratia proteamacu... [more]
TDH_COLP31.018e-2737.69L-threonine 3-dehydrogenase OS=Colwellia psychrery... [more]
TDH_ALTMD1.330e-2737.50L-threonine 3-dehydrogenase OS=Alteromonas macleod... [more]
TDH_YERPY1.736e-2738.74L-threonine 3-dehydrogenase OS=Yersinia pseudotube... [more]
TDH_YERPS1.736e-2738.74L-threonine 3-dehydrogenase OS=Yersinia pseudotube... [more]
TDH_YERPP1.736e-2738.74L-threonine 3-dehydrogenase OS=Yersinia pestis (st... [more]
TDH_YERPN1.736e-2738.74L-threonine 3-dehydrogenase OS=Yersinia pestis bv.... [more]
TDH_YERPG1.736e-2738.74L-threonine 3-dehydrogenase OS=Yersinia pestis bv.... [more]
TDH_YERPE1.736e-2738.74L-threonine 3-dehydrogenase OS=Yersinia pestis GN=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-007-H05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728735 ID=EY728735; Name=EY728735; organism=Citrus sinensis; type=EST; length=834bp
CCACGCGTCCGAGACCTTGAGGCTTGCCGATTTTGTAGTGAAAGAGCCTA
TGGTGATCGGGCATGAGTGTGCTGGGGTCATAGAGAAGGTGGGAAGCGAG
GTGAAGACTTTGGTGCCCGGTGACCGTGTGGCCCTGGAACCAGGGATCAG
CTGCTGGCGATGTGATCACTGCAAAGGAGGTCGATACAATTTGTGTCCAG
AGATGAAATTTTTTGCAACTCCGCCAGTTCATGGTTCTCTGGCTAATCAG
GTGGTGCATCCTGCAGACCTATGTTTTAAGCTGCCGGACAATGTGAGCCT
GGAGGAAGGGGCTATGTGTGAGCCCTTGAGTGTTGGTGTTCATGCTTGCC
GCCGTGCCAATATCGGTCCTGAGACAAATGTGCTTATCATGGGTGCAGGG
CCCATAGGACTTGTCACAATGCTAGCAGCTCGTGCTTTTGGAGCTCCTAG
AATTGTCATTGTGGATGTGGATGACTATCGTTTATCTGTTGCAAAGGAAA
TTGGTGCAGATAATATTGTTAAAGTTTCAACAAATTTGCAGGATATAGCT
GAAGAAGTGGAAAAGATACAGAAAGCCATGGGGACAGGAATAGATGTGAG
CTTTGATTGTGCAGGCCTTAACAAAACATGTCAACAGCACTGGGCGCCAC
TTGTGCAGGTGGTNAAAGTTGCTCGTGGGGGATGGGTCATCATGAAATGA
CTGTCCCACTCACTCCANCTGCTGGTAAGTGATTGGATTTGGCTTAAATA
AGGGCAAAAGGAATCTTGAACCAGGTGGCTGCCANGCGTGATGGACTGAT
GGGGATGCTAATGACTAGGTATGCTTTATGGTGG
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