EY728735

Overview
NameEY728735
Unique NameEY728735
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length834
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728735 vs. ExPASy Swiss-Prot
Match: TDH_SHEB9 (L-threonine 3-dehydrogenase OS=Shewanella baltica (strain OS195) GN=tdh PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.470e-26
Identity = 71/192 (36.98%), Postives = 108/192 (56.25%), Query Frame = 2
Query:   47 PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGL 619
            PMV+GHE  G +  +G EV+    GDRV+ E  I+C  C +C+ GR +LC            GS A  +V PA   FK+PD++S +  ++ +P    VH     ++  E +VLI GAGPIG++     R  GA  +VI DV++YRL +A+++GA   V VS  +L+D+ +E+      M  G DV  + +G+
Sbjct:   58 PMVVGHEYVGEVVDIGQEVRGFKIGDRVSGEGHITCGHCRNCRAGRTHLCRNTSGVGVNR-EGSFAEYLVIPAFNAFKIPDDISDDLASIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVCRHVGARHVVITDVNEYRLELARKMGATRAVNVSKESLKDVMKEL-----GMTEGFDVGLEMSGV 242          
BLAST of EY728735 vs. ExPASy Swiss-Prot
Match: TDH_SHEB5 (L-threonine 3-dehydrogenase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=tdh PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.470e-26
Identity = 71/192 (36.98%), Postives = 108/192 (56.25%), Query Frame = 2
Query:   47 PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGL 619
            PMV+GHE  G +  +G EV+    GDRV+ E  I+C  C +C+ GR +LC            GS A  +V PA   FK+PD++S +  ++ +P    VH     ++  E +VLI GAGPIG++     R  GA  +VI DV++YRL +A+++GA   V VS  +L+D+ +E+      M  G DV  + +G+
Sbjct:   58 PMVVGHEYVGEVVDIGQEVRGFKIGDRVSGEGHITCGHCRNCRAGRTHLCRNTSGVGVNR-EGSFAEYLVIPAFNAFKIPDDISDDLASIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVCRHVGARHVVITDVNEYRLELARKMGATRAVNVSKESLKDVMKEL-----GMTEGFDVGLEMSGV 242          
BLAST of EY728735 vs. ExPASy Swiss-Prot
Match: TDH_SHEB2 (L-threonine 3-dehydrogenase OS=Shewanella baltica (strain OS223) GN=tdh PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.470e-26
Identity = 71/192 (36.98%), Postives = 108/192 (56.25%), Query Frame = 2
Query:   47 PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGL 619
            PMV+GHE  G +  +G EV+    GDRV+ E  I+C  C +C+ GR +LC            GS A  +V PA   FK+PD++S +  ++ +P    VH     ++  E +VLI GAGPIG++     R  GA  +VI DV++YRL +A+++GA   V VS  +L+D+ +E+      M  G DV  + +G+
Sbjct:   58 PMVVGHEYVGEVVDIGQEVRGFKIGDRVSGEGHITCGHCRNCRAGRTHLCRNTSGVGVNR-EGSFAEYLVIPAFNAFKIPDDISDDLASIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVCRHVGARHVVITDVNEYRLELARKMGATRAVNVSKESLKDVMKEL-----GMTEGFDVGLEMSGV 242          
BLAST of EY728735 vs. ExPASy Swiss-Prot
Match: TDH_SHEAM (L-threonine 3-dehydrogenase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=tdh PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.470e-26
Identity = 71/192 (36.98%), Postives = 108/192 (56.25%), Query Frame = 2
Query:   47 PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGL 619
            PMV+GHE  G +  +G EV+    GDRV+ E  I+C  C +C+ GR +LC            GS A  +V PA   FK+PD++S +  A+ +P    VH     ++  E +VLI GAGPIG++     R  GA  +VI DV++YRL +A+++GA   V V+  NL+D+ +++      M  G DV  + +G+
Sbjct:   58 PMVVGHEYVGEVVGIGQEVRGFKIGDRVSGEGHITCGHCRNCRAGRTHLCRNTTGVGVNR-EGSFAEYLVIPAFNAFKIPDDISDDLAAIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVCRHVGARHVVITDVNEYRLELARKMGATRAVNVAKENLKDVMKDL-----GMTEGFDVGLEMSGV 242          
BLAST of EY728735 vs. ExPASy Swiss-Prot
Match: TDH_ECOLI (L-threonine 3-dehydrogenase OS=Escherichia coli (strain K12) GN=tdh PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.470e-26
Identity = 73/192 (38.02%), Postives = 107/192 (55.73%), Query Frame = 2
Query:   47 PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAG 616
            PMV+GHE  G +  +G EVK    GDRV+ E  I+C  C +C+GGR +LC   +      P  G  A  +V PA   FK+PDN+S +  A+ +P    VH     ++  E +VL+ GAGPIG++    A+  GA  +VI DV++YRL +A+++G    V V+  NL D+  E+      M  G DV  + +G
Sbjct:   58 PMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVGVNRP--GCFAEYLVIPAFNAFKIPDNISDDLAAIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGIMAAAVAKHVGARNVVITDVNEYRLELARKMGITRAVNVAKENLNDVMAEL-----GMTEGFDVGLEMSG 241          
BLAST of EY728735 vs. ExPASy Swiss-Prot
Match: TDH_ECODH (L-threonine 3-dehydrogenase OS=Escherichia coli (strain K12 / DH10B) GN=tdh PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.470e-26
Identity = 73/192 (38.02%), Postives = 107/192 (55.73%), Query Frame = 2
Query:   47 PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAG 616
            PMV+GHE  G +  +G EVK    GDRV+ E  I+C  C +C+GGR +LC   +      P  G  A  +V PA   FK+PDN+S +  A+ +P    VH     ++  E +VL+ GAGPIG++    A+  GA  +VI DV++YRL +A+++G    V V+  NL D+  E+      M  G DV  + +G
Sbjct:   58 PMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVGVNRP--GCFAEYLVIPAFNAFKIPDNISDDLAAIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGIMAAAVAKHVGARNVVITDVNEYRLELARKMGITRAVNVAKENLNDVMAEL-----GMTEGFDVGLEMSG 241          
BLAST of EY728735 vs. ExPASy Swiss-Prot
Match: TDH_ECOBW (L-threonine 3-dehydrogenase OS=Escherichia coli (strain K12 / BW2952) GN=tdh PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.470e-26
Identity = 73/192 (38.02%), Postives = 107/192 (55.73%), Query Frame = 2
Query:   47 PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAG 616
            PMV+GHE  G +  +G EVK    GDRV+ E  I+C  C +C+GGR +LC   +      P  G  A  +V PA   FK+PDN+S +  A+ +P    VH     ++  E +VL+ GAGPIG++    A+  GA  +VI DV++YRL +A+++G    V V+  NL D+  E+      M  G DV  + +G
Sbjct:   58 PMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVGVNRP--GCFAEYLVIPAFNAFKIPDNISDDLAAIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGIMAAAVAKHVGARNVVITDVNEYRLELARKMGITRAVNVAKENLNDVMAEL-----GMTEGFDVGLEMSG 241          
BLAST of EY728735 vs. ExPASy Swiss-Prot
Match: TDH_SHESW (L-threonine 3-dehydrogenase OS=Shewanella sp. (strain W3-18-1) GN=tdh PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.920e-26
Identity = 71/192 (36.98%), Postives = 108/192 (56.25%), Query Frame = 2
Query:   47 PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGL 619
            PMV+GHE  G +  +G EV+    GDRV+ E  I+C  C +C+ GR +LC            GS A  +V PA   FK+PD++S +  ++ +P    VH     ++  E +VLI GAGPIG++     R  GA  +VI DV++YRL +A+++GA   V VS  +L+D+ +E+      M  G DV  + +G+
Sbjct:   58 PMVVGHEYVGEVVDIGQEVRGFNIGDRVSGEGHITCGHCRNCRAGRTHLCRNTSGVGVNR-EGSFAEYLVIPAFNAFKIPDDISDDLASIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVCRHVGARHVVITDVNEYRLELARKMGATRAVNVSKESLKDVMKEL-----GMTEGFDVGLEMSGV 242          
BLAST of EY728735 vs. ExPASy Swiss-Prot
Match: TDH_SHEHH (L-threonine 3-dehydrogenase OS=Shewanella halifaxensis (strain HAW-EB4) GN=tdh PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.920e-26
Identity = 70/192 (36.46%), Postives = 108/192 (56.25%), Query Frame = 2
Query:   47 PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGL 619
            PMV+GHE  G +  +G EV+    GDRV+ E  I+C  C +C+GGR +LC            G+ A  +V PA   FK+PD++S +  ++ +P    VH     ++  E +VLI GAGPIG++     R  GA  +VI DV++YRL +A+++GA   V V+   L+D+ +E+      M  G DV  + +G+
Sbjct:   58 PMVVGHEYVGEVVGMGQEVRGFTIGDRVSGEGHITCGHCRNCRGGRTHLCRNTSGVGVNR-EGAFAEYLVIPAFNAFKIPDDISDDLASIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVCRHVGARHVVITDVNEYRLELAQKMGATRAVNVAKEKLEDVMQEL-----GMTEGFDVGLEMSGV 242          
BLAST of EY728735 vs. ExPASy Swiss-Prot
Match: TDH_PSEA6 (L-threonine 3-dehydrogenase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=tdh PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.920e-26
Identity = 69/192 (35.94%), Postives = 108/192 (56.25%), Query Frame = 2
Query:   47 PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGL 619
            PMV+GHE  G + ++G EV+    GDRV+ E  I+C  C +C+ GR +LC            G+ A  +  PA   FK+PDN+S +  A+ +P    VH     ++  E +VLI GAGPIG++    A+  GA  +VI DV++YRL +A+++GA   V V+  +L+D+  ++      M  G DV  + +G+
Sbjct:   58 PMVVGHEYVGEVVEIGEEVRGFAIGDRVSGEGHITCGHCRNCRAGRRHLCRNTSGVGVNRA-GAFAEYLSIPAFNAFKIPDNISDDLAAIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVAQHVGARHVVITDVNEYRLDLARKMGASRAVNVAKESLKDVMNDL-----GMSEGFDVGLEMSGV 242          
The following BLAST results are available for this feature:
BLAST of EY728735 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 272
Match NameE-valueIdentityDescription
TDH_SHEB91.470e-2636.98L-threonine 3-dehydrogenase OS=Shewanella baltica ... [more]
TDH_SHEB51.470e-2636.98L-threonine 3-dehydrogenase OS=Shewanella baltica ... [more]
TDH_SHEB21.470e-2636.98L-threonine 3-dehydrogenase OS=Shewanella baltica ... [more]
TDH_SHEAM1.470e-2636.98L-threonine 3-dehydrogenase OS=Shewanella amazonen... [more]
TDH_ECOLI1.470e-2638.02L-threonine 3-dehydrogenase OS=Escherichia coli (s... [more]
TDH_ECODH1.470e-2638.02L-threonine 3-dehydrogenase OS=Escherichia coli (s... [more]
TDH_ECOBW1.470e-2638.02L-threonine 3-dehydrogenase OS=Escherichia coli (s... [more]
TDH_SHESW1.920e-2636.98L-threonine 3-dehydrogenase OS=Shewanella sp. (str... [more]
TDH_SHEHH1.920e-2636.46L-threonine 3-dehydrogenase OS=Shewanella halifaxe... [more]
TDH_PSEA61.920e-2635.94L-threonine 3-dehydrogenase OS=Pseudoalteromonas a... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-007-H05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728735 ID=EY728735; Name=EY728735; organism=Citrus sinensis; type=EST; length=834bp
CCACGCGTCCGAGACCTTGAGGCTTGCCGATTTTGTAGTGAAAGAGCCTA
TGGTGATCGGGCATGAGTGTGCTGGGGTCATAGAGAAGGTGGGAAGCGAG
GTGAAGACTTTGGTGCCCGGTGACCGTGTGGCCCTGGAACCAGGGATCAG
CTGCTGGCGATGTGATCACTGCAAAGGAGGTCGATACAATTTGTGTCCAG
AGATGAAATTTTTTGCAACTCCGCCAGTTCATGGTTCTCTGGCTAATCAG
GTGGTGCATCCTGCAGACCTATGTTTTAAGCTGCCGGACAATGTGAGCCT
GGAGGAAGGGGCTATGTGTGAGCCCTTGAGTGTTGGTGTTCATGCTTGCC
GCCGTGCCAATATCGGTCCTGAGACAAATGTGCTTATCATGGGTGCAGGG
CCCATAGGACTTGTCACAATGCTAGCAGCTCGTGCTTTTGGAGCTCCTAG
AATTGTCATTGTGGATGTGGATGACTATCGTTTATCTGTTGCAAAGGAAA
TTGGTGCAGATAATATTGTTAAAGTTTCAACAAATTTGCAGGATATAGCT
GAAGAAGTGGAAAAGATACAGAAAGCCATGGGGACAGGAATAGATGTGAG
CTTTGATTGTGCAGGCCTTAACAAAACATGTCAACAGCACTGGGCGCCAC
TTGTGCAGGTGGTNAAAGTTGCTCGTGGGGGATGGGTCATCATGAAATGA
CTGTCCCACTCACTCCANCTGCTGGTAAGTGATTGGATTTGGCTTAAATA
AGGGCAAAAGGAATCTTGAACCAGGTGGCTGCCANGCGTGATGGACTGAT
GGGGATGCTAATGACTAGGTATGCTTTATGGTGG
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