EY728735

Overview
NameEY728735
Unique NameEY728735
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length834
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728735 vs. ExPASy Swiss-Prot
Match: TDH_ECO57 (L-threonine 3-dehydrogenase OS=Escherichia coli O157:H7 GN=tdh PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.275e-26
Identity = 72/192 (37.50%), Postives = 107/192 (55.73%), Query Frame = 2
Query:   47 PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAG 616
            PMV+GHE  G +  +G EVK    GDRV+ E  I+C  C +C+GGR +LC   +      P  G  A  +V PA   FK+PDN+S +  ++ +P    VH     ++  E +VL+ GAGPIG++    A+  GA  +VI DV++YRL +A+++G    V V+  NL D+  E+      M  G DV  + +G
Sbjct:   58 PMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVGVNRP--GCFAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGIMAAAVAKHVGARNVVITDVNEYRLELARKMGITRAVNVAKENLNDVMAEL-----GMTEGFDVGLEMSG 241          
BLAST of EY728735 vs. ExPASy Swiss-Prot
Match: TDH_ECO55 (L-threonine 3-dehydrogenase OS=Escherichia coli (strain 55989 / EAEC) GN=tdh PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.275e-26
Identity = 72/192 (37.50%), Postives = 107/192 (55.73%), Query Frame = 2
Query:   47 PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAG 616
            PMV+GHE  G +  +G EVK    GDRV+ E  I+C  C +C+GGR +LC   +      P  G  A  +V PA   FK+PDN+S +  ++ +P    VH     ++  E +VL+ GAGPIG++    A+  GA  +VI DV++YRL +A+++G    V V+  NL D+  E+      M  G DV  + +G
Sbjct:   58 PMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVGVNRP--GCFAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGIMAAAVAKHVGARNVVITDVNEYRLELARKMGITRAVNVAKENLNDVMAEL-----GMTEGFDVGLEMSG 241          
BLAST of EY728735 vs. ExPASy Swiss-Prot
Match: TDH_ECO45 (L-threonine 3-dehydrogenase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=tdh PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.275e-26
Identity = 72/192 (37.50%), Postives = 107/192 (55.73%), Query Frame = 2
Query:   47 PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAG 616
            PMV+GHE  G +  +G EVK    GDRV+ E  I+C  C +C+GGR +LC   +      P  G  A  +V PA   FK+PDN+S +  ++ +P    VH     ++  E +VL+ GAGPIG++    A+  GA  +VI DV++YRL +A+++G    V V+  NL D+  E+      M  G DV  + +G
Sbjct:   58 PMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVGVNRP--GCFAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGIMAAAVAKHVGARNVVITDVNEYRLELARKMGITRAVNVAKENLNDVMTEL-----GMTEGFDVGLEMSG 241          
BLAST of EY728735 vs. ExPASy Swiss-Prot
Match: TDH_ECO27 (L-threonine 3-dehydrogenase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=tdh PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.275e-26
Identity = 72/192 (37.50%), Postives = 107/192 (55.73%), Query Frame = 2
Query:   47 PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAG 616
            PMV+GHE  G +  +G EVK    GDRV+ E  I+C  C +C+GGR +LC   +      P  G  A  +V PA   FK+PDN+S +  ++ +P    VH     ++  E +VL+ GAGPIG++    A+  GA  +VI DV++YRL +A+++G    V V+  NL D+  E+      M  G DV  + +G
Sbjct:   58 PMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVGVNRP--GCFAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGIMAAAVAKHVGARNVVITDVNEYRLELARKMGITRAVNVAKENLNDVMTEL-----GMTEGFDVGLEMSG 241          
BLAST of EY728735 vs. ExPASy Swiss-Prot
Match: TDH_DEIDV (L-threonine 3-dehydrogenase OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=tdh PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.277e-26
Identity = 71/198 (35.86%), Postives = 109/198 (55.05%), Query Frame = 2
Query:   26 ADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG 616
            A   +  PMV+GHE  GV+  +GSEV+    GDRV+ E  ++C  C +C+ GR +LC   +      P  GS A  +V PA   FKLPD++  +  A+ +P    VH     ++  E +VL+ GAGPIG++    AR  GA  +VI D++DYRL +A+++G    V V+   ++    V + +  M  G DV  + +G
Sbjct:   51 AQKTIPVPMVVGHEYVGVVAAMGSEVRGFNVGDRVSGEGHVTCGHCRNCRAGRRHLCRNTLGVGVNRP--GSFAEYLVLPAFNAFKLPDDIPDDVAAIFDPFGNAVHTALSFDLVGE-DVLVTGAGPIGVMAAAVARHVGARNVVITDINDYRLDLARKMGVTRAVNVT---KEDLWSVARNELGMTEGFDVGLEMSG 242          
BLAST of EY728735 vs. ExPASy Swiss-Prot
Match: TDH_AERHH (L-threonine 3-dehydrogenase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=tdh PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.277e-26
Identity = 78/218 (35.78%), Postives = 113/218 (51.83%), Query Frame = 2
Query:   47 PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTCQQHWAPLVQVVKVARGGWVIM 694
            PMV+GHE  G +  +G EV+    GDRV+ E  I+C  C +C+ GR +LC   +      P  G+ A  +V PA   FKLPDNV  E  A+ +P    VH     ++  E +VLI GAGPIG++     R  GA  +VI DV++YRL +A+++GA   V V+   L  +  E+      M  G DV  + +G+    Q        + K+  GG + M
Sbjct:   58 PMVVGHEYVGEVVAIGQEVRGFAVGDRVSGEGHITCGHCRNCRAGRTHLCRNTIGVGVNRP--GAFAEYLVIPAFNAFKLPDNVPDELAAIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVCRHVGARHVVITDVNEYRLELARKMGATRAVNVTKEQLSGVMSEL-----GMTEGFDVGLEMSGVPSAFQD------MIDKMNHGGKIAM 261          
BLAST of EY728735 vs. ExPASy Swiss-Prot
Match: TDH_DEIRA (L-threonine 3-dehydrogenase OS=Deinococcus radiodurans GN=tdh PE=3 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 5.586e-26
Identity = 71/193 (36.79%), Postives = 107/193 (55.44%), Query Frame = 2
Query:   26 ADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVS 601
            A   V  PMV+GHE  GV+  +GSEV+    GDRV+ E  ++C  C +C+ GR +LC   +        GS A  +V PA   FKLPD++  +  A+ +P    VH     ++  E +VLI GAGPIG +    AR  GA  +VI DV+DYRL +A+++G    V V+  +L  +A +   + +    G+++S
Sbjct:   51 ASQTVPVPMVVGHEYVGVVAGMGSEVRGFEIGDRVSGEGHVTCGHCRNCRAGRRHLCRNTQGVGVNR-PGSFAEYLVLPAFNAFKLPDDIPDDVAAIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGCMAAAVARHVGARNVVITDVNDYRLDLARQMGVTRAVNVAREDLWTVATQELDMHEGFDVGMEMS 241          
BLAST of EY728735 vs. ExPASy Swiss-Prot
Match: TDH_VIBCM (L-threonine 3-dehydrogenase OS=Vibrio cholerae serotype O1 (strain M66-2) GN=tdh PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 9.528e-26
Identity = 69/192 (35.94%), Postives = 107/192 (55.73%), Query Frame = 2
Query:   47 PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGL 619
            PMV+GHE  G +  +G EV+    GDRV+ E  I+C  C +C+GGR +LC            G  +  +V PA   FK+PD +S +  ++ +P    VH     ++  E +VLI GAGPIG++    A+  GA  +VI DV++YRL +A+++G    V V+  NL+D+ +E+      M  G DV  + +G+
Sbjct:   60 PMVVGHEYVGEVVGIGQEVRGFQIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVGVNRT-GCFSEYLVIPAFNAFKIPDGISDDLASIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLDLARKMGVTRAVNVAEQNLEDVMKEL-----GMTEGFDVGLEMSGV 244          
BLAST of EY728735 vs. ExPASy Swiss-Prot
Match: TDH_VIBCH (L-threonine 3-dehydrogenase OS=Vibrio cholerae GN=tdh PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 9.528e-26
Identity = 69/192 (35.94%), Postives = 107/192 (55.73%), Query Frame = 2
Query:   47 PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGL 619
            PMV+GHE  G +  +G EV+    GDRV+ E  I+C  C +C+GGR +LC            G  +  +V PA   FK+PD +S +  ++ +P    VH     ++  E +VLI GAGPIG++    A+  GA  +VI DV++YRL +A+++G    V V+  NL+D+ +E+      M  G DV  + +G+
Sbjct:   60 PMVVGHEYVGEVVGIGQEVRGFQIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVGVNRT-GCFSEYLVIPAFNAFKIPDGISDDLASIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLDLARKMGVTRAVNVAEQNLEDVMKEL-----GMTEGFDVGLEMSGV 244          
BLAST of EY728735 vs. ExPASy Swiss-Prot
Match: TDH_VIBC3 (L-threonine 3-dehydrogenase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=tdh PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 9.528e-26
Identity = 69/192 (35.94%), Postives = 107/192 (55.73%), Query Frame = 2
Query:   47 PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGL 619
            PMV+GHE  G +  +G EV+    GDRV+ E  I+C  C +C+GGR +LC            G  +  +V PA   FK+PD +S +  ++ +P    VH     ++  E +VLI GAGPIG++    A+  GA  +VI DV++YRL +A+++G    V V+  NL+D+ +E+      M  G DV  + +G+
Sbjct:   60 PMVVGHEYVGEVVGIGQEVRGFQIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVGVNRT-GCFSEYLVIPAFNAFKIPDGISDDLASIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLDLARKMGVTRAVNVAEQNLEDVMKEL-----GMTEGFDVGLEMSGV 244          
The following BLAST results are available for this feature:
BLAST of EY728735 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 272
Match NameE-valueIdentityDescription
TDH_ECO573.275e-2637.50L-threonine 3-dehydrogenase OS=Escherichia coli O1... [more]
TDH_ECO553.275e-2637.50L-threonine 3-dehydrogenase OS=Escherichia coli (s... [more]
TDH_ECO453.275e-2637.50L-threonine 3-dehydrogenase OS=Escherichia coli O4... [more]
TDH_ECO273.275e-2637.50L-threonine 3-dehydrogenase OS=Escherichia coli O1... [more]
TDH_DEIDV4.277e-2635.86L-threonine 3-dehydrogenase OS=Deinococcus deserti... [more]
TDH_AERHH4.277e-2635.78L-threonine 3-dehydrogenase OS=Aeromonas hydrophil... [more]
TDH_DEIRA5.586e-2636.79L-threonine 3-dehydrogenase OS=Deinococcus radiodu... [more]
TDH_VIBCM9.528e-2635.94L-threonine 3-dehydrogenase OS=Vibrio cholerae ser... [more]
TDH_VIBCH9.528e-2635.94L-threonine 3-dehydrogenase OS=Vibrio cholerae GN=... [more]
TDH_VIBC39.528e-2635.94L-threonine 3-dehydrogenase OS=Vibrio cholerae ser... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-007-H05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728735 ID=EY728735; Name=EY728735; organism=Citrus sinensis; type=EST; length=834bp
CCACGCGTCCGAGACCTTGAGGCTTGCCGATTTTGTAGTGAAAGAGCCTA
TGGTGATCGGGCATGAGTGTGCTGGGGTCATAGAGAAGGTGGGAAGCGAG
GTGAAGACTTTGGTGCCCGGTGACCGTGTGGCCCTGGAACCAGGGATCAG
CTGCTGGCGATGTGATCACTGCAAAGGAGGTCGATACAATTTGTGTCCAG
AGATGAAATTTTTTGCAACTCCGCCAGTTCATGGTTCTCTGGCTAATCAG
GTGGTGCATCCTGCAGACCTATGTTTTAAGCTGCCGGACAATGTGAGCCT
GGAGGAAGGGGCTATGTGTGAGCCCTTGAGTGTTGGTGTTCATGCTTGCC
GCCGTGCCAATATCGGTCCTGAGACAAATGTGCTTATCATGGGTGCAGGG
CCCATAGGACTTGTCACAATGCTAGCAGCTCGTGCTTTTGGAGCTCCTAG
AATTGTCATTGTGGATGTGGATGACTATCGTTTATCTGTTGCAAAGGAAA
TTGGTGCAGATAATATTGTTAAAGTTTCAACAAATTTGCAGGATATAGCT
GAAGAAGTGGAAAAGATACAGAAAGCCATGGGGACAGGAATAGATGTGAG
CTTTGATTGTGCAGGCCTTAACAAAACATGTCAACAGCACTGGGCGCCAC
TTGTGCAGGTGGTNAAAGTTGCTCGTGGGGGATGGGTCATCATGAAATGA
CTGTCCCACTCACTCCANCTGCTGGTAAGTGATTGGATTTGGCTTAAATA
AGGGCAAAAGGAATCTTGAACCAGGTGGCTGCCANGCGTGATGGACTGAT
GGGGATGCTAATGACTAGGTATGCTTTATGGTGG
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