EY728728

Overview
NameEY728728
Unique NameEY728728
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length817
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728728 vs. ExPASy Swiss-Prot
Match: GLNE_YERP3 (Glutamate-ammonia-ligase adenylyltransferase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=glnE PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.124e-15
Identity = 45/120 (37.50%), Postives = 59/120 (49.17%), Query Frame = -3
Query:  273 HLGTKSTPAGTAXNAFDPRVAFDLKQDAGGIVDMKFMVQYAALAWSAQHPSLXRYTDNIRILEGXEQVGXMPAADAHLXREVYKAYRSAAHRQALQNEAGTVAGDQFADERRQVQXIWHE 632
            HLG+K             R  FD+K DAGGI D++F+ QY  L ++A  P L R++DN+RI E       M   +A      Y   R   H  ALQ ++  VA D F  ER QV   WH+
Sbjct:  834 HLGSKQ------------RDIFDIKADAGGITDIEFIAQYLVLRYAASEPRLTRWSDNVRIFESMAHYDIMSPEEAAALTRAYVTMRDEIHHLALQEQSSKVAADSFIAEREQVAASWHK 941          
BLAST of EY728728 vs. ExPASy Swiss-Prot
Match: GLNE_SERP5 (Glutamate-ammonia-ligase adenylyltransferase OS=Serratia proteamaculans (strain 568) GN=glnE PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.918e-15
Identity = 40/100 (40.00%), Postives = 54/100 (54.00%), Query Frame = -3
Query:  279 RVAFDLKQDAGGIVDMKFMVQYAALAWSAQHPSLXRYTDNIRILEGXEQVGXMPAADAHLXREVYKAYRSAAHRQALQNEAGTVAGDQFADERRQVQXIW 578
            R  FD+K D GGI D++F+ QY  L ++A  P L R++DN+RI E       MP  +A    + Y   R   H  ALQ  +G +   QFA ER QV+  W
Sbjct:  841 RELFDIKADEGGITDIEFIAQYLVLGYAAAEPRLTRWSDNVRIFELMANYDIMPEEEARALTQAYVTMRDEIHHLALQEHSGKIGNGQFAAEREQVRASW 940          
BLAST of EY728728 vs. ExPASy Swiss-Prot
Match: GLNE_KLEP3 (Glutamate-ammonia-ligase adenylyltransferase OS=Klebsiella pneumoniae (strain 342) GN=glnE PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.918e-15
Identity = 41/99 (41.41%), Postives = 57/99 (57.58%), Query Frame = -3
Query:  273 FDLKQDAGGIVDMKFMVQYAALAWSAQHPSLXRYTDNIRILEGXEQVGXMPAADAHLXREVYKAYRSAAHRQALQNEAGTVAGDQFADERRQVQXIWHE 569
            FD+K DAGGI D++F+ QY  L +++  P L R++DN+RILE   Q   M   +A      Y   R A H  ALQ + G VA + F+ ER+QV   W +
Sbjct:  843 FDIKADAGGITDIEFITQYLVLRYASDKPKLTRWSDNVRILELLAQNDIMDEEEARALTHAYTTLRDALHHLALQEQPGHVAPEAFSRERQQVSASWQK 941          
BLAST of EY728728 vs. ExPASy Swiss-Prot
Match: GLNE_KLEP7 (Glutamate-ammonia-ligase adenylyltransferase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=glnE PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.517e-15
Identity = 41/99 (41.41%), Postives = 55/99 (55.56%), Query Frame = -3
Query:  273 FDLKQDAGGIVDMKFMVQYAALAWSAQHPSLXRYTDNIRILEGXEQVGXMPAADAHLXREVYKAYRSAAHRQALQNEAGTVAGDQFADERRQVQXIWHE 569
            FD+K DAGGI D++F+ QY  L +++  P L R++DN+RILE   Q   M   +A      Y   R A H  ALQ   G VA + F+ ER QV   W +
Sbjct:  843 FDIKADAGGITDIEFITQYLVLRYASDKPKLTRWSDNVRILELLAQNDIMDEEEARALTHAYTTLRDALHHLALQELPGHVAPEAFSREREQVSASWQK 941          
BLAST of EY728728 vs. ExPASy Swiss-Prot
Match: GLNE_VIBVY (Glutamate-ammonia-ligase adenylyltransferase OS=Vibrio vulnificus (strain YJ016) GN=glnE PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.374e-13
Identity = 42/99 (42.42%), Postives = 53/99 (53.54%), Query Frame = -3
Query:  273 FDLKQDAGGIVDMKFMVQYAALAWSAQHPSLXRYTDNIRILEGXEQVGXMPAADAHLXREVYKAYRSAAHRQALQNEAGTVAGDQFADERRQVQXIWHE 569
            F LKQD GGI D++F+ QY  L +SA+ P L R+ DN+RI E     G M  A A L  + Y   R   HR+ L N    VA D+F   R+ V   W E
Sbjct:  845 FMLKQDQGGITDIEFLAQYLVLNYSAEKPKLTRWCDNVRIFETLIAQGVMEEAQAMLLTQAYTTMRDEIHRRNLLNLDADVALDKFVALRQGVSKAWQE 943          
BLAST of EY728728 vs. ExPASy Swiss-Prot
Match: GLNE_VIBVU (Glutamate-ammonia-ligase adenylyltransferase OS=Vibrio vulnificus GN=glnE PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.374e-13
Identity = 42/99 (42.42%), Postives = 53/99 (53.54%), Query Frame = -3
Query:  273 FDLKQDAGGIVDMKFMVQYAALAWSAQHPSLXRYTDNIRILEGXEQVGXMPAADAHLXREVYKAYRSAAHRQALQNEAGTVAGDQFADERRQVQXIWHE 569
            F LKQD GGI D++F+ QY  L +SA+ P L R+ DN+RI E     G M  A A L  + Y   R   HR+ L N    VA D+F   R+ V   W E
Sbjct:  845 FMLKQDQGGITDIEFLAQYLVLNYSAEKPKLTRWCDNVRIFETLIAQGVMEEAQAMLLTQAYTTMRDEIHRRNLLNLDADVALDKFVALRQGVSKAWQE 943          
BLAST of EY728728 vs. ExPASy Swiss-Prot
Match: GLNE_SALTY (Glutamate-ammonia-ligase adenylyltransferase OS=Salmonella typhimurium GN=glnE PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.061e-13
Identity = 41/102 (40.20%), Postives = 54/102 (52.94%), Query Frame = -3
Query:  273 RVAFDLKQDAGGIVDMKFMVQYAALAWSAQHPSLXRYTDNIRILEGXEQVGXMPAADAHLXREVYKAYRSAAHRQALQNEAGTVAGDQFADERRQVQXIWHE 578
            R  FD+K D GGI D++F+ QY  L ++ + P L R++DN+RILE   Q G M   +A      Y   R   H  ALQ   G VA   F+ ER  VQ  W +
Sbjct:  841 RDRFDIKADEGGITDIEFIAQYLVLRYAHEKPKLTRWSDNVRILELLAQNGIMDEHEAQALTVAYTTLRDELHHLALQELPGHVAQTCFSKERALVQASWRK 942          
BLAST of EY728728 vs. ExPASy Swiss-Prot
Match: GLNE_SALTI (Glutamate-ammonia-ligase adenylyltransferase OS=Salmonella typhi GN=glnE PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.061e-13
Identity = 41/102 (40.20%), Postives = 54/102 (52.94%), Query Frame = -3
Query:  273 RVAFDLKQDAGGIVDMKFMVQYAALAWSAQHPSLXRYTDNIRILEGXEQVGXMPAADAHLXREVYKAYRSAAHRQALQNEAGTVAGDQFADERRQVQXIWHE 578
            R  FD+K D GGI D++F+ QY  L ++ + P L R++DN+RILE   Q G M   +A      Y   R   H  ALQ   G VA   F+ ER  VQ  W +
Sbjct:  841 RDRFDIKADEGGITDIEFIAQYLVLRYAHEKPKLTRWSDNVRILELLAQNGIMDEHEAQALTVAYTTLRDELHHLALQELPGHVAQTCFSKERALVQASWRK 942          
BLAST of EY728728 vs. ExPASy Swiss-Prot
Match: GLNE_SALSV (Glutamate-ammonia-ligase adenylyltransferase OS=Salmonella schwarzengrund (strain CVM19633) GN=glnE PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.061e-13
Identity = 41/102 (40.20%), Postives = 54/102 (52.94%), Query Frame = -3
Query:  273 RVAFDLKQDAGGIVDMKFMVQYAALAWSAQHPSLXRYTDNIRILEGXEQVGXMPAADAHLXREVYKAYRSAAHRQALQNEAGTVAGDQFADERRQVQXIWHE 578
            R  FD+K D GGI D++F+ QY  L ++ + P L R++DN+RILE   Q G M   +A      Y   R   H  ALQ   G VA   F+ ER  VQ  W +
Sbjct:  841 RDRFDIKADEGGITDIEFIAQYLVLRYAHEKPKLTRWSDNVRILELLAQNGIMDEHEAQALTVAYTTLRDELHHLALQELPGHVAQTCFSKERALVQASWRK 942          
BLAST of EY728728 vs. ExPASy Swiss-Prot
Match: GLNE_SALPK (Glutamate-ammonia-ligase adenylyltransferase OS=Salmonella paratyphi A (strain AKU_12601) GN=glnE PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.061e-13
Identity = 41/102 (40.20%), Postives = 54/102 (52.94%), Query Frame = -3
Query:  273 RVAFDLKQDAGGIVDMKFMVQYAALAWSAQHPSLXRYTDNIRILEGXEQVGXMPAADAHLXREVYKAYRSAAHRQALQNEAGTVAGDQFADERRQVQXIWHE 578
            R  FD+K D GGI D++F+ QY  L ++ + P L R++DN+RILE   Q G M   +A      Y   R   H  ALQ   G VA   F+ ER  VQ  W +
Sbjct:  841 RDRFDIKADEGGITDIEFIAQYLVLRYAHEKPKLTRWSDNVRILELLAQNGIMDEHEAQALTVAYTTLRDELHHLALQELPGHVAQTCFSKERALVQASWRK 942          
The following BLAST results are available for this feature:
BLAST of EY728728 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 78
Match NameE-valueIdentityDescription
GLNE_YERP31.124e-1537.50Glutamate-ammonia-ligase adenylyltransferase OS=Ye... [more]
GLNE_SERP51.918e-1540.00Glutamate-ammonia-ligase adenylyltransferase OS=Se... [more]
GLNE_KLEP31.918e-1541.41Glutamate-ammonia-ligase adenylyltransferase OS=Kl... [more]
GLNE_KLEP79.517e-1541.41Glutamate-ammonia-ligase adenylyltransferase OS=Kl... [more]
GLNE_VIBVY1.374e-1342.42Glutamate-ammonia-ligase adenylyltransferase OS=Vi... [more]
GLNE_VIBVU1.374e-1342.42Glutamate-ammonia-ligase adenylyltransferase OS=Vi... [more]
GLNE_SALTY3.061e-1340.20Glutamate-ammonia-ligase adenylyltransferase OS=Sa... [more]
GLNE_SALTI3.061e-1340.20Glutamate-ammonia-ligase adenylyltransferase OS=Sa... [more]
GLNE_SALSV3.061e-1340.20Glutamate-ammonia-ligase adenylyltransferase OS=Sa... [more]
GLNE_SALPK3.061e-1340.20Glutamate-ammonia-ligase adenylyltransferase OS=Sa... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-007-G08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728728 ID=EY728728; Name=EY728728; organism=Citrus sinensis; type=EST; length=817bp
GGTCGCCAGTTCCAGCGCGCCATGGCCGAGCGGGAAGCTCAAAGCCTGAC
GCACCTCGGGCATACGCTCAAGAATCGGCCGGCTCCACTCGGGGGCGAGC
ACGTCGATTTGGCAGTCGGGATGGCGTTGTTTCAGGCACTGGAACAGTGT
CTGTGCCATCACCATGTCACCGACCCAACTGGGCCCAACGATCAGAATAT
TCATGTAGTTTCCACAAACGATACGGGGAGGCTCATGCCTCCCCGCCTTA
TATANTTTCANCTTANCCCCANTTCATGCCAAATTCNCTGCACCTGNCGC
CGTTCGTCAGCGAACTGATCCCCGGCAACGGTCCCGGCCTCGTTCTGCAA
GGCCTGGCGGTGAGCGGCGGAACGGTAGGCTTTATACACCTCGCGCANCA
AATGGGCATCGGCAGCGGGCATCANCCCGACCTGCTCCANCCCTTCCAGA
ATGCGGATATTGTCGGTGTANCGCANCAACGATGGATGTTGCGCAGACCA
CGCCAAAGCCGCGTATTGCACCATAAATTTCATATCGACGATACCTCCGG
CGTCCTGCTTGAGGTCGAACGCCACCCGTGGGTCGAAGGCATTCNCCGCC
GTTCCCGCCGGCGTGGACTTGGTACCGAGGTGGCGNNCATTCTGGCGCGC
ATTCGCCGAGCTCCTGNGGCAGTGGTGCAGGCCGTGNGCGGGGCGGGCGG
GGNNCGGGGCCCGCCNGANGGCGCGAACGTCCGCAGGCGTGGAGGCGGCG
CANGGCGGGGCNGGGGTGCGGGCCNTGGGCGCCGCGGGCGGNGGGGGGTT
GGTCCTTCGCGCCCGCG
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