EY728728

Overview
NameEY728728
Unique NameEY728728
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length817
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728728 vs. ExPASy Swiss-Prot
Match: GLNE_ECO27 (Glutamate-ammonia-ligase adenylyltransferase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=glnE PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.984e-12
Identity = 39/102 (38.24%), Postives = 53/102 (51.96%), Query Frame = -3
Query:  273 RVAFDLKQDAGGIVDMKFMVQYAALAWSAQHPSLXRYTDNIRILEGXEQVGXMPAADAHLXREVYKAYRSAAHRQALQNEAGTVAGDQFADERRQVQXIWHE 578
            R  FD+K D GGI D++F+ QY  L ++ + P L R++DN+RILE   Q   M   +A      Y   R   H  ALQ   G V+ D F  ER  V+  W +
Sbjct:  840 RDRFDIKADEGGITDIEFITQYLVLRYAHEKPKLTRWSDNVRILELLAQNDIMEEQEAMALTRAYTTLRDELHHLALQELPGHVSEDCFTAERELVRASWQK 941          
BLAST of EY728728 vs. ExPASy Swiss-Prot
Match: GLNE_MANSM (Glutamate-ammonia-ligase adenylyltransferase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=glnE PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.592e-12
Identity = 34/99 (34.34%), Postives = 58/99 (58.59%), Query Frame = -3
Query:  273 FDLKQDAGGIVDMKFMVQYAALAWSAQHPSLXRYTDNIRILEGXEQVGXMPAADAHLXREVYKAYRSAAHRQALQNEAGTVAGDQFADERRQVQXIWHE 569
            F++K+D GGI D++F+ QY  LA + ++P+L  ++DN+RI +   + G +   +A   +  Y   R+  H   L  E   V+ ++FADERR +  IW +
Sbjct:  879 FNIKKDQGGITDIEFIAQYLVLAHAPENPNLAYWSDNVRIFDIMAEHGIITLNEAEKLKNCYTGLRNQIHHLNLLGEPPIVSKEEFADERRFIHQIWQK 977          
BLAST of EY728728 vs. ExPASy Swiss-Prot
Match: GLNE_SHIFL (Glutamate-ammonia-ligase adenylyltransferase OS=Shigella flexneri GN=glnE PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.385e-12
Identity = 39/102 (38.24%), Postives = 53/102 (51.96%), Query Frame = -3
Query:  273 RVAFDLKQDAGGIVDMKFMVQYAALAWSAQHPSLXRYTDNIRILEGXEQVGXMPAADAHLXREVYKAYRSAAHRQALQNEAGTVAGDQFADERRQVQXIWHE 578
            R  FD+K D GGI D++F+ QY  L ++ + P L R++DN+RILE   Q   M   +A      Y   R   H  ALQ   G V+ D F  ER  V+  W +
Sbjct:  840 RNRFDIKADEGGITDIEFITQYLVLRYAHEKPKLTRWSDNVRILELLAQNDIMEEQEAMALTRAYTTLRDELHHLALQELPGHVSEDCFTAERDLVRASWQK 941          
BLAST of EY728728 vs. ExPASy Swiss-Prot
Match: GLNE_SHIBS (Glutamate-ammonia-ligase adenylyltransferase OS=Shigella boydii serotype 4 (strain Sb227) GN=glnE PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.385e-12
Identity = 39/102 (38.24%), Postives = 53/102 (51.96%), Query Frame = -3
Query:  273 RVAFDLKQDAGGIVDMKFMVQYAALAWSAQHPSLXRYTDNIRILEGXEQVGXMPAADAHLXREVYKAYRSAAHRQALQNEAGTVAGDQFADERRQVQXIWHE 578
            R  FD+K D GGI D++F+ QY  L ++ + P L R++DN+RILE   Q   M   +A      Y   R   H  ALQ   G V+ D F  ER  V+  W +
Sbjct:  840 RNRFDIKADEGGITDIEFITQYLVLRYAHEKPKLTRWSDNVRILELLAQNDIMEEQEAMALTRAYTTLRDELHHLALQELPGHVSEDCFTAERDLVRASWQK 941          
BLAST of EY728728 vs. ExPASy Swiss-Prot
Match: GLNE_SHIB3 (Glutamate-ammonia-ligase adenylyltransferase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=glnE PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.385e-12
Identity = 39/102 (38.24%), Postives = 53/102 (51.96%), Query Frame = -3
Query:  273 RVAFDLKQDAGGIVDMKFMVQYAALAWSAQHPSLXRYTDNIRILEGXEQVGXMPAADAHLXREVYKAYRSAAHRQALQNEAGTVAGDQFADERRQVQXIWHE 578
            R  FD+K D GGI D++F+ QY  L ++ + P L R++DN+RILE   Q   M   +A      Y   R   H  ALQ   G V+ D F  ER  V+  W +
Sbjct:  840 RNRFDIKADEGGITDIEFITQYLVLRYAHEKPKLTRWSDNVRILELLAQNDIMEEQEAMALTRAYTTLRDELHHLALQELPGHVSEDCFTAERDLVRASWQK 941          
BLAST of EY728728 vs. ExPASy Swiss-Prot
Match: GLNE_ECOSE (Glutamate-ammonia-ligase adenylyltransferase OS=Escherichia coli (strain SE11) GN=glnE PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.385e-12
Identity = 39/102 (38.24%), Postives = 52/102 (50.98%), Query Frame = -3
Query:  273 RVAFDLKQDAGGIVDMKFMVQYAALAWSAQHPSLXRYTDNIRILEGXEQVGXMPAADAHLXREVYKAYRSAAHRQALQNEAGTVAGDQFADERRQVQXIWHE 578
            R  FD+K D GGI D++F+ QY  L ++ + P L R++DN+RILE   Q   M   +A      Y   R   H  ALQ   G V  D F  ER  V+  W +
Sbjct:  840 RDRFDIKADEGGITDIEFITQYLVLRYAHEKPKLTRWSDNVRILELLAQNDIMEEQEAMALTRAYTTLRDELHHLALQELPGHVPEDCFTAERELVRASWQK 941          
BLAST of EY728728 vs. ExPASy Swiss-Prot
Match: GLNE_ECO8A (Glutamate-ammonia-ligase adenylyltransferase OS=Escherichia coli O8 (strain IAI1) GN=glnE PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.385e-12
Identity = 39/102 (38.24%), Postives = 52/102 (50.98%), Query Frame = -3
Query:  273 RVAFDLKQDAGGIVDMKFMVQYAALAWSAQHPSLXRYTDNIRILEGXEQVGXMPAADAHLXREVYKAYRSAAHRQALQNEAGTVAGDQFADERRQVQXIWHE 578
            R  FD+K D GGI D++F+ QY  L ++ + P L R++DN+RILE   Q   M   +A      Y   R   H  ALQ   G V  D F  ER  V+  W +
Sbjct:  840 RNRFDIKADEGGITDIEFITQYLVLRYAHEKPKLTRWSDNVRILELLAQNDIMEEQEAMALTRAYTTLRDELHHLALQELPGHVPEDCFTAERELVRASWQK 941          
BLAST of EY728728 vs. ExPASy Swiss-Prot
Match: GLNE_ECO5E (Glutamate-ammonia-ligase adenylyltransferase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=glnE PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.385e-12
Identity = 39/102 (38.24%), Postives = 52/102 (50.98%), Query Frame = -3
Query:  273 RVAFDLKQDAGGIVDMKFMVQYAALAWSAQHPSLXRYTDNIRILEGXEQVGXMPAADAHLXREVYKAYRSAAHRQALQNEAGTVAGDQFADERRQVQXIWHE 578
            R  FD+K D GGI D++F+ QY  L ++ + P L R++DN+RILE   Q   M   +A      Y   R   H  ALQ   G V  D F  ER  V+  W +
Sbjct:  840 RDRFDIKADEGGITDIEFITQYLVLRYAHEKPKLTRWSDNVRILELLAQNDIMEEQEAMALTRAYTTLRDELHHLALQELPGHVPEDCFTAERELVRASWQK 941          
BLAST of EY728728 vs. ExPASy Swiss-Prot
Match: GLNE_ECO57 (Glutamate-ammonia-ligase adenylyltransferase OS=Escherichia coli O157:H7 GN=glnE PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.385e-12
Identity = 39/102 (38.24%), Postives = 52/102 (50.98%), Query Frame = -3
Query:  273 RVAFDLKQDAGGIVDMKFMVQYAALAWSAQHPSLXRYTDNIRILEGXEQVGXMPAADAHLXREVYKAYRSAAHRQALQNEAGTVAGDQFADERRQVQXIWHE 578
            R  FD+K D GGI D++F+ QY  L ++ + P L R++DN+RILE   Q   M   +A      Y   R   H  ALQ   G V  D F  ER  V+  W +
Sbjct:  840 RDRFDIKADEGGITDIEFITQYLVLRYAHEKPKLTRWSDNVRILELLAQNDIMEEQEAMALTRAYTTLRDELHHLALQELPGHVPEDCFTAERELVRASWQK 941          
BLAST of EY728728 vs. ExPASy Swiss-Prot
Match: GLNE_BURPS (Glutamate-ammonia-ligase adenylyltransferase OS=Burkholderia pseudomallei GN=glnE PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.540e-12
Identity = 38/98 (38.78%), Postives = 52/98 (53.06%), Query Frame = -3
Query:  279 FDLKQDAGGIVDMKFMVQYAALAWSAQHPSLXRYTDNIRILEGXEQVGXMPAADAHLXREVYKAYRSAAHRQALQN-EAGTVAGDQFADERRQVQXIW 569
            FDLK D GG+VD++F VQY  L  +A+HP + R T NI +L    + G M   +A      Y+ YR   HR  L   E   V  ++ A ER+ V  +W
Sbjct:  824 FDLKHDRGGMVDIEFAVQYWVLLHAARHPEMIRNTGNIALLREVSRFGLMSEEEAETVGAAYRTYRKLQHRLRLDGMEKARVEPERVAAERQAVAALW 921          
The following BLAST results are available for this feature:
BLAST of EY728728 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 78
Match NameE-valueIdentityDescription
GLNE_ECO271.984e-1238.24Glutamate-ammonia-ligase adenylyltransferase OS=Es... [more]
GLNE_MANSM2.592e-1234.34Glutamate-ammonia-ligase adenylyltransferase OS=Ma... [more]
GLNE_SHIFL3.385e-1238.24Glutamate-ammonia-ligase adenylyltransferase OS=Sh... [more]
GLNE_SHIBS3.385e-1238.24Glutamate-ammonia-ligase adenylyltransferase OS=Sh... [more]
GLNE_SHIB33.385e-1238.24Glutamate-ammonia-ligase adenylyltransferase OS=Sh... [more]
GLNE_ECOSE3.385e-1238.24Glutamate-ammonia-ligase adenylyltransferase OS=Es... [more]
GLNE_ECO8A3.385e-1238.24Glutamate-ammonia-ligase adenylyltransferase OS=Es... [more]
GLNE_ECO5E3.385e-1238.24Glutamate-ammonia-ligase adenylyltransferase OS=Es... [more]
GLNE_ECO573.385e-1238.24Glutamate-ammonia-ligase adenylyltransferase OS=Es... [more]
GLNE_BURPS7.540e-1238.78Glutamate-ammonia-ligase adenylyltransferase OS=Bu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-007-G08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728728 ID=EY728728; Name=EY728728; organism=Citrus sinensis; type=EST; length=817bp
GGTCGCCAGTTCCAGCGCGCCATGGCCGAGCGGGAAGCTCAAAGCCTGAC
GCACCTCGGGCATACGCTCAAGAATCGGCCGGCTCCACTCGGGGGCGAGC
ACGTCGATTTGGCAGTCGGGATGGCGTTGTTTCAGGCACTGGAACAGTGT
CTGTGCCATCACCATGTCACCGACCCAACTGGGCCCAACGATCAGAATAT
TCATGTAGTTTCCACAAACGATACGGGGAGGCTCATGCCTCCCCGCCTTA
TATANTTTCANCTTANCCCCANTTCATGCCAAATTCNCTGCACCTGNCGC
CGTTCGTCAGCGAACTGATCCCCGGCAACGGTCCCGGCCTCGTTCTGCAA
GGCCTGGCGGTGAGCGGCGGAACGGTAGGCTTTATACACCTCGCGCANCA
AATGGGCATCGGCAGCGGGCATCANCCCGACCTGCTCCANCCCTTCCAGA
ATGCGGATATTGTCGGTGTANCGCANCAACGATGGATGTTGCGCAGACCA
CGCCAAAGCCGCGTATTGCACCATAAATTTCATATCGACGATACCTCCGG
CGTCCTGCTTGAGGTCGAACGCCACCCGTGGGTCGAAGGCATTCNCCGCC
GTTCCCGCCGGCGTGGACTTGGTACCGAGGTGGCGNNCATTCTGGCGCGC
ATTCGCCGAGCTCCTGNGGCAGTGGTGCAGGCCGTGNGCGGGGCGGGCGG
GGNNCGGGGCCCGCCNGANGGCGCGAACGTCCGCAGGCGTGGAGGCGGCG
CANGGCGGGGCNGGGGTGCGGGCCNTGGGCGCCGCGGGCGGNGGGGGGTT
GGTCCTTCGCGCCCGCG
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