EY728728

Overview
NameEY728728
Unique NameEY728728
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length817
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728728 vs. ExPASy Swiss-Prot
Match: GLNE_BURMA (Glutamate-ammonia-ligase adenylyltransferase OS=Burkholderia mallei GN=glnE PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.540e-12
Identity = 38/98 (38.78%), Postives = 52/98 (53.06%), Query Frame = -3
Query:  279 FDLKQDAGGIVDMKFMVQYAALAWSAQHPSLXRYTDNIRILEGXEQVGXMPAADAHLXREVYKAYRSAAHRQALQN-EAGTVAGDQFADERRQVQXIW 569
            FDLK D GG+VD++F VQY  L  +A+HP + R T NI +L    + G M   +A      Y+ YR   HR  L   E   V  ++ A ER+ V  +W
Sbjct:  822 FDLKHDRGGMVDIEFAVQYWVLLHAARHPEMIRNTGNIALLREVSRFGLMSEEEAETVGAAYRTYRKLQHRLRLDGMEKARVEPERVAAERQAVAALW 919          
BLAST of EY728728 vs. ExPASy Swiss-Prot
Match: GLNE_PSYIN (Glutamate-ammonia-ligase adenylyltransferase OS=Psychromonas ingrahamii (strain 37) GN=glnE PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.286e-11
Identity = 37/100 (37.00%), Postives = 53/100 (53.00%), Query Frame = -3
Query:  273 FDLKQDAGGIVDMKFMVQYAALAWSAQ-HPSLXRYTDNIRILEGXEQVGXMPAADAHLXREVYKAYRSAAHRQALQNEAGTVAGDQFADERRQVQXIWHE 569
            FDLKQ  GG+VD++F  QY  LA +      L +++DN+RI E   ++G +   +       Y A R A HR  L  +   + GDQF  ER+ V  IW +
Sbjct:  844 FDLKQSPGGMVDIEFFAQYLVLAHACHCGEELCKWSDNLRIFETCRKLGLLTLDEEKKLTGAYCALRDATHRLTLNKKTRIIKGDQFIQERQNVIKIWEK 943          
BLAST of EY728728 vs. ExPASy Swiss-Prot
Match: GLNE_PASHA (Glutamate-ammonia-ligase adenylyltransferase OS=Pasteurella haemolytica GN=glnE PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.286e-11
Identity = 33/97 (34.02%), Postives = 52/97 (53.61%), Query Frame = -3
Query:  279 FDLKQDAGGIVDMKFMVQYAALAWSAQHPSLXRYTDNIRILEGXEQVGXMPAADAHLXREVYKAYRSAAHRQALQNEAGTVAGDQFADERRQVQXIW 569
            F +KQD GGI D++F+ QY  LA S QHP +  ++DN+RI +   + G + +  +   +  Y A R+  H   L  +   V   +F  ER  V+ +W
Sbjct:  862 FHIKQDQGGITDIEFIAQYLVLAHSHQHPKMAVWSDNVRIFDSAVECGILSSEQSEQLQHCYTALRNKIHHLKLLRKDSVVDASEFTTERAFVREMW 958          
BLAST of EY728728 vs. ExPASy Swiss-Prot
Match: GLNE_VIBPA (Glutamate-ammonia-ligase adenylyltransferase OS=Vibrio parahaemolyticus GN=glnE PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.865e-11
Identity = 37/99 (37.37%), Postives = 51/99 (51.52%), Query Frame = -3
Query:  273 FDLKQDAGGIVDMKFMVQYAALAWSAQHPSLXRYTDNIRILEGXEQVGXMPAADAHLXREVYKAYRSAAHRQALQNEAGTVAGDQFADERRQVQXIWHE 569
            F +KQD GGI D++F+ QY  L +S + P L R+ DN+RI E     G M    A      Y A R+  H + L N    V  D+F  ER  V+  W++
Sbjct:  846 FMIKQDVGGITDIEFLAQYLVLNYSHEKPKLTRWCDNVRIYETLIAQGVMEEDQAMQLIRAYTAMRNEIHHRNLLNLDADVVEDKFVAEREWVKQAWNQ 944          
BLAST of EY728728 vs. ExPASy Swiss-Prot
Match: GLNE_IDILO (Glutamate-ammonia-ligase adenylyltransferase OS=Idiomarina loihiensis GN=glnE PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.742e-11
Identity = 34/98 (34.69%), Postives = 56/98 (57.14%), Query Frame = -3
Query:  276 FDLKQDAGGIVDMKFMVQYAALAWSAQHPSLXRYTDNIRILEGXEQVGXMPAADAHLXREVYKAYRSAAHRQALQNEAGTVAGDQFADERRQVQXIWH 569
            FDLKQD GGI D++F+ QY  L ++ ++P L +Y+DN+R+L   +Q+  +   DA      ++ +R  +H  ALQ E   +      +ER+ V   W+
Sbjct:  846 FDLKQDPGGIADIEFITQYLVLRYAHKYPELCKYSDNVRLLTEAQQLHLLTEVDAQNLINAFQIFRCESHSLALQGEQ-LLEEHNLDNERQAVLNCWN 942          
BLAST of EY728728 vs. ExPASy Swiss-Prot
Match: GLNE_PASMU (Glutamate-ammonia-ligase adenylyltransferase OS=Pasteurella multocida GN=glnE PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.888e-11
Identity = 34/98 (34.69%), Postives = 53/98 (54.08%), Query Frame = -3
Query:  276 FDLKQDAGGIVDMKFMVQYAALAWSAQHPSLXRYTDNIRILEGXEQVGXMPAADAHLXREVYKAYRSAAHRQALQNEAGTVAGDQFADERRQVQXIWH 569
            F++K D GGI D++F+ QY  LA + Q+P+L R++DN+RI E   +   +        ++ Y   R+  H   L  E   V   +F  ER+ +Q IWH
Sbjct:  878 FNIKTDRGGITDIEFIAQYLVLAHAPQNPALTRWSDNVRIFEIMAESAVISQEICDQLKQCYVDLRNRIHHLNLLGELSIVPQTEFQTERQFIQTIWH 975          
BLAST of EY728728 vs. ExPASy Swiss-Prot
Match: GLNE_AZOSE (Glutamate-ammonia-ligase adenylyltransferase OS=Azoarcus sp. (strain EbN1) GN=glnE PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.888e-11
Identity = 35/97 (36.08%), Postives = 54/97 (55.67%), Query Frame = -3
Query:  279 FDLKQDAGGIVDMKFMVQYAALAWSAQHPSLXRYTDNIRILEGXEQVGXMPAADAHLXREVYKAYRSAAHRQALQNEAGTVAGDQFADERRQVQXIW 569
            F+LK DAGG+VD++F++QY  L  + ++P L     NI +L    ++G +PA  A    + Y+ +R   HRQ L      VA D+ A  R  V+ +W
Sbjct:  835 FNLKHDAGGLVDVEFLIQYLVLGHAHRYPELTGNLGNIALLRIAGELGLIPAELAARCGDSYRLFRRLQHRQRLNGLLSLVAPDEVAAAREPVRALW 931          
BLAST of EY728728 vs. ExPASy Swiss-Prot
Match: GLNE_PHOPR (Glutamate-ammonia-ligase adenylyltransferase OS=Photobacterium profundum GN=glnE PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.383e-11
Identity = 37/99 (37.37%), Postives = 49/99 (49.49%), Query Frame = -3
Query:  273 FDLKQDAGGIVDMKFMVQYAALAWSAQHPSLXRYTDNIRILEGXEQVGXMPAADAHLXREVYKAYRSAAHRQALQNEAGTVAGDQFADERRQVQXIWHE 569
            F LKQD GGI D++F+ QY  L  S   P L R++DN+RI +   +   +  + A   ++ Y   R   HR  L      V   QF  ER  VQ IW E
Sbjct:  851 FGLKQDKGGITDIEFLAQYLVLQHSHTEPYLTRWSDNVRIFDTMAECEVLSLSQASALKQAYCVMRDDIHRLNLLGLPVYVDESQFVTERETVQQIWQE 949          
The following BLAST results are available for this feature:
BLAST of EY728728 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 78
Match NameE-valueIdentityDescription
GLNE_BURMA7.540e-1238.78Glutamate-ammonia-ligase adenylyltransferase OS=Bu... [more]
GLNE_PSYIN1.286e-1137.00Glutamate-ammonia-ligase adenylyltransferase OS=Ps... [more]
GLNE_PASHA1.286e-1134.02Glutamate-ammonia-ligase adenylyltransferase OS=Pa... [more]
GLNE_VIBPA2.865e-1137.37Glutamate-ammonia-ligase adenylyltransferase OS=Vi... [more]
GLNE_IDILO3.742e-1134.69Glutamate-ammonia-ligase adenylyltransferase OS=Id... [more]
GLNE_PASMU4.888e-1134.69Glutamate-ammonia-ligase adenylyltransferase OS=Pa... [more]
GLNE_AZOSE4.888e-1136.08Glutamate-ammonia-ligase adenylyltransferase OS=Az... [more]
GLNE_PHOPR6.383e-1137.37Glutamate-ammonia-ligase adenylyltransferase OS=Ph... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-007-G08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728728 ID=EY728728; Name=EY728728; organism=Citrus sinensis; type=EST; length=817bp
GGTCGCCAGTTCCAGCGCGCCATGGCCGAGCGGGAAGCTCAAAGCCTGAC
GCACCTCGGGCATACGCTCAAGAATCGGCCGGCTCCACTCGGGGGCGAGC
ACGTCGATTTGGCAGTCGGGATGGCGTTGTTTCAGGCACTGGAACAGTGT
CTGTGCCATCACCATGTCACCGACCCAACTGGGCCCAACGATCAGAATAT
TCATGTAGTTTCCACAAACGATACGGGGAGGCTCATGCCTCCCCGCCTTA
TATANTTTCANCTTANCCCCANTTCATGCCAAATTCNCTGCACCTGNCGC
CGTTCGTCAGCGAACTGATCCCCGGCAACGGTCCCGGCCTCGTTCTGCAA
GGCCTGGCGGTGAGCGGCGGAACGGTAGGCTTTATACACCTCGCGCANCA
AATGGGCATCGGCAGCGGGCATCANCCCGACCTGCTCCANCCCTTCCAGA
ATGCGGATATTGTCGGTGTANCGCANCAACGATGGATGTTGCGCAGACCA
CGCCAAAGCCGCGTATTGCACCATAAATTTCATATCGACGATACCTCCGG
CGTCCTGCTTGAGGTCGAACGCCACCCGTGGGTCGAAGGCATTCNCCGCC
GTTCCCGCCGGCGTGGACTTGGTACCGAGGTGGCGNNCATTCTGGCGCGC
ATTCGCCGAGCTCCTGNGGCAGTGGTGCAGGCCGTGNGCGGGGCGGGCGG
GGNNCGGGGCCCGCCNGANGGCGCGAACGTCCGCAGGCGTGGAGGCGGCG
CANGGCGGGGCNGGGGTGCGGGCCNTGGGCGCCGCGGGCGGNGGGGGGTT
GGTCCTTCGCGCCCGCG
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