EY728715

Overview
NameEY728715
Unique NameEY728715
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length813
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11773 contig Csv1_Contig11773:1..817. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMB_YERPY (Probable phosphoglycerate mutase gpmB OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=gpmB PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.864e-16
Identity = 59/155 (38.06%), Postives = 86/155 (55.48%), Query Frame = 1 
Query:  145 EIIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQ---AFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIXVVTHG 600
            ++ +VRHGET WN   ++QGQ D  L E+G  QA  VA+R+  +  I+ I SSDL R  +TA+ IA+ C GL ++ DP LRE ++G L+    R    + P   Q     ++G     IP  GES+ +L RR  +AL        G +  +V+HG
Sbjct:    3 QVYLVRHGETLWNAARRIQGQSDSPLTEIGIRQAHLVAQRVRNQ-GITHIISSDLGRTQQTAKIIADAC-GLTMVTDPRLRELNMGVLEN---RPIDSLTPEEEQWRKQMVNGTEGARIP-EGESMTELGRRMHAALDSCLELPAGSKPLLVSHG 151
[Close]
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMB_YERPS (Probable phosphoglycerate mutase gpmB OS=Yersinia pseudotuberculosis GN=gpmB PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.864e-16
Identity = 59/155 (38.06%), Postives = 86/155 (55.48%), Query Frame = 1 
Query:  145 EIIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQ---AFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIXVVTHG 600
            ++ +VRHGET WN   ++QGQ D  L E+G  QA  VA+R+  +  I+ I SSDL R  +TA+ IA+ C GL ++ DP LRE ++G L+    R    + P   Q     ++G     IP  GES+ +L RR  +AL        G +  +V+HG
Sbjct:    3 QVYLVRHGETLWNAARRIQGQSDSPLTEIGIRQAHLVAQRVRNQ-GITHIISSDLGRTQQTAKIIADAC-GLTMVTDPRLRELNMGVLEN---RPIDSLTPEEEQWRKQMVNGTEGARIP-EGESMTELGRRMHAALDSCLELPAGSKPLLVSHG 151
[Close]
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMB_YERPP (Probable phosphoglycerate mutase gpmB OS=Yersinia pestis (strain Pestoides F) GN=gpmB PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.864e-16
Identity = 59/155 (38.06%), Postives = 86/155 (55.48%), Query Frame = 1 
Query:  145 EIIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQ---AFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIXVVTHG 600
            ++ +VRHGET WN   ++QGQ D  L E+G  QA  VA+R+  +  I+ I SSDL R  +TA+ IA+ C GL ++ DP LRE ++G L+    R    + P   Q     ++G     IP  GES+ +L RR  +AL        G +  +V+HG
Sbjct:    3 QVYLVRHGETLWNAARRIQGQSDSPLTEIGIRQAHLVAQRVRNQ-GITHIISSDLGRTQQTAKIIADAC-GLTMVTDPRLRELNMGVLEN---RPIDSLTPEEEQWRKQMVNGTEGARIP-EGESMTELGRRMHAALDSCLELPAGSKPLLVSHG 151
[Close]
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMB_YERPN (Probable phosphoglycerate mutase gpmB OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=gpmB PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.864e-16
Identity = 59/155 (38.06%), Postives = 86/155 (55.48%), Query Frame = 1 
Query:  145 EIIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQ---AFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIXVVTHG 600
            ++ +VRHGET WN   ++QGQ D  L E+G  QA  VA+R+  +  I+ I SSDL R  +TA+ IA+ C GL ++ DP LRE ++G L+    R    + P   Q     ++G     IP  GES+ +L RR  +AL        G +  +V+HG
Sbjct:    3 QVYLVRHGETLWNAARRIQGQSDSPLTEIGIRQAHLVAQRVRNQ-GITHIISSDLGRTQQTAKIIADAC-GLTMVTDPRLRELNMGVLEN---RPIDSLTPEEEQWRKQMVNGTEGARIP-EGESMTELGRRMHAALDSCLELPAGSKPLLVSHG 151
[Close]
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMB_YERPG (Probable phosphoglycerate mutase gpmB OS=Yersinia pestis bv. Antiqua (strain Angola) GN=gpmB PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.864e-16
Identity = 59/155 (38.06%), Postives = 86/155 (55.48%), Query Frame = 1 
Query:  145 EIIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQ---AFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIXVVTHG 600
            ++ +VRHGET WN   ++QGQ D  L E+G  QA  VA+R+  +  I+ I SSDL R  +TA+ IA+ C GL ++ DP LRE ++G L+    R    + P   Q     ++G     IP  GES+ +L RR  +AL        G +  +V+HG
Sbjct:    3 QVYLVRHGETLWNAARRIQGQSDSPLTEIGIRQAHLVAQRVRNQ-GITHIISSDLGRTQQTAKIIADAC-GLTMVTDPRLRELNMGVLEN---RPIDSLTPEEEQWRKQMVNGTEGARIP-EGESMTELGRRMHAALDSCLELPAGSKPLLVSHG 151
[Close]
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMB_YERPE (Probable phosphoglycerate mutase gpmB OS=Yersinia pestis GN=gpmB PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.864e-16
Identity = 59/155 (38.06%), Postives = 86/155 (55.48%), Query Frame = 1 
Query:  145 EIIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQ---AFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIXVVTHG 600
            ++ +VRHGET WN   ++QGQ D  L E+G  QA  VA+R+  +  I+ I SSDL R  +TA+ IA+ C GL ++ DP LRE ++G L+    R    + P   Q     ++G     IP  GES+ +L RR  +AL        G +  +V+HG
Sbjct:    3 QVYLVRHGETLWNAARRIQGQSDSPLTEIGIRQAHLVAQRVRNQ-GITHIISSDLGRTQQTAKIIADAC-GLTMVTDPRLRELNMGVLEN---RPIDSLTPEEEQWRKQMVNGTEGARIP-EGESMTELGRRMHAALDSCLELPAGSKPLLVSHG 151
[Close]
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMB_YERPB (Probable phosphoglycerate mutase gpmB OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=gpmB PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.864e-16
Identity = 59/155 (38.06%), Postives = 86/155 (55.48%), Query Frame = 1 
Query:  145 EIIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQ---AFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIXVVTHG 600
            ++ +VRHGET WN   ++QGQ D  L E+G  QA  VA+R+  +  I+ I SSDL R  +TA+ IA+ C GL ++ DP LRE ++G L+    R    + P   Q     ++G     IP  GES+ +L RR  +AL        G +  +V+HG
Sbjct:    3 QVYLVRHGETLWNAARRIQGQSDSPLTEIGIRQAHLVAQRVRNQ-GITHIISSDLGRTQQTAKIIADAC-GLTMVTDPRLRELNMGVLEN---RPIDSLTPEEEQWRKQMVNGTEGARIP-EGESMTELGRRMHAALDSCLELPAGSKPLLVSHG 151
[Close]
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMB_YERPA (Probable phosphoglycerate mutase gpmB OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=gpmB PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.864e-16
Identity = 59/155 (38.06%), Postives = 86/155 (55.48%), Query Frame = 1 
Query:  145 EIIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQ---AFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIXVVTHG 600
            ++ +VRHGET WN   ++QGQ D  L E+G  QA  VA+R+  +  I+ I SSDL R  +TA+ IA+ C GL ++ DP LRE ++G L+    R    + P   Q     ++G     IP  GES+ +L RR  +AL        G +  +V+HG
Sbjct:    3 QVYLVRHGETLWNAARRIQGQSDSPLTEIGIRQAHLVAQRVRNQ-GITHIISSDLGRTQQTAKIIADAC-GLTMVTDPRLRELNMGVLEN---RPIDSLTPEEEQWRKQMVNGTEGARIP-EGESMTELGRRMHAALDSCLELPAGSKPLLVSHG 151
[Close]
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMB_YERP3 (Probable phosphoglycerate mutase gpmB OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=gpmB PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.864e-16
Identity = 59/155 (38.06%), Postives = 86/155 (55.48%), Query Frame = 1 
Query:  145 EIIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQ---AFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIXVVTHG 600
            ++ +VRHGET WN   ++QGQ D  L E+G  QA  VA+R+  +  I+ I SSDL R  +TA+ IA+ C GL ++ DP LRE ++G L+    R    + P   Q     ++G     IP  GES+ +L RR  +AL        G +  +V+HG
Sbjct:    3 QVYLVRHGETLWNAARRIQGQSDSPLTEIGIRQAHLVAQRVRNQ-GITHIISSDLGRTQQTAKIIADAC-GLTMVTDPRLRELNMGVLEN---RPIDSLTPEEEQWRKQMVNGTEGARIP-EGESMTELGRRMHAALDSCLELPAGSKPLLVSHG 151
[Close]
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMB_SHIDS (Probable phosphoglycerate mutase gpmB OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=gpmB PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.046e-16
Identity = 57/152 (37.50%), Postives = 81/152 (53.29%), Query Frame = 1 
Query:  145 EIIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIXVVTHG 600
            ++ +VRHGET WN + ++QGQ D  L   G +QA+ VA R AKE  I+ I SSDL R   T + IA  C G  +I D  LRE ++G L+        +      +  ++G  D  IP  GES+ +L  R  +AL+       G R  +V+HG
Sbjct:    3 QVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATR-AKELGITHIISSDLGRTRRTVEIIAQAC-GCDIIFDSRLRELNMGVLEKSHIDSLTEEEENWRRQLVNGTVDGRIP-EGESMQELSDRVNAALESCRDLPQGSRPLLVSHG 151
The following BLAST results are available for this feature:
BLAST of EY728715 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
GPMB_YERPY3.864e-1638.06Probable phosphoglycerate mutase gpmB OS=Yersinia ... [more]
GPMB_YERPS3.864e-1638.06Probable phosphoglycerate mutase gpmB OS=Yersinia ... [more]
GPMB_YERPP3.864e-1638.06Probable phosphoglycerate mutase gpmB OS=Yersinia ... [more]
GPMB_YERPN3.864e-1638.06Probable phosphoglycerate mutase gpmB OS=Yersinia ... [more]
GPMB_YERPG3.864e-1638.06Probable phosphoglycerate mutase gpmB OS=Yersinia ... [more]
GPMB_YERPE3.864e-1638.06Probable phosphoglycerate mutase gpmB OS=Yersinia ... [more]
GPMB_YERPB3.864e-1638.06Probable phosphoglycerate mutase gpmB OS=Yersinia ... [more]
GPMB_YERPA3.864e-1638.06Probable phosphoglycerate mutase gpmB OS=Yersinia ... [more]
GPMB_YERP33.864e-1638.06Probable phosphoglycerate mutase gpmB OS=Yersinia ... [more]
GPMB_SHIDS5.046e-1637.50Probable phosphoglycerate mutase gpmB OS=Shigella ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-007-F05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728715 ID=EY728715; Name=EY728715; organism=Citrus sinensis; type=EST; length=813bp
CCACGCGTCCGAAAAATCCCAAAACATTTCTGCGCGGAATCGGAACGGAT
TCAGAGGCACTCAAAACCCGGGAACATGGCCGAGTCAACGGAGTCTCCAG
CAGTCATGAACGGCAGCTCTGCCTCTGTTGGGCCTGATTATTGTGAGATC
ATTGTGGTGCGTCACGGTGAAACGCCTTGGAACGTTCAAGGAAAAGTTCA
GGGGCAGTTAGATGTTGAATTGAATGAAGTTGGAAGAGAGCAAGCTGTTT
CTGTGGCTGAGCGGCTGGCTAAGGAATTTAAAATTTCTGTTATCTATTCT
TCTGACCTGAAGCGAGCACTCGAAACTGCACAGACAATTGCAAACAGATG
TGGTGGGCTAAAGGTCATTGAAGATCCTGAACTAAGGGAAAGACATCTTG
GAGATCTTCAAGGCCTTGTTTTCCGTGAAGCAGCCAAAGTCTGTCCTATA
GCATATCAAGCATTTTTATCTGGCAAGACAGATCAAGATATCCCTGGTGG
TGGAGAAAGTCTTGATCAACTTTATCGACGGTGCACGTCTGCATTGCAGA
GAATTGCTAGGAAGCATATAGGAGAGCGAATANTAGTTGTGACTCATGGT
GGTGTAATCAGAACACTCTACCAACGGGCTTGCCCAAACAAAAAGCCTGA
AGGTAAGGTCCTGAATACTCTATCAACATATTTAGGTTGACTGAAAAAAC
AAGTGGGTCTTAAAAACTGGGGTGATGTTAGTCATCTCACCCAACAGGAT
TCTAAAGTCTGGTTTTGGTGGGGACTCACTTCCTGGTTATTCTGGGGCGG
GGCTCTGATGTGG
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