EY728715

Overview
NameEY728715
Unique NameEY728715
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length813
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11773 contig Csv1_Contig11773:1..817. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMB_ENTS8 (Probable phosphoglycerate mutase gpmB OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=gpmB PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.046e-16
Identity = 58/152 (38.16%), Postives = 81/152 (53.29%), Query Frame = 1
Query:  145 EIIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIXVVTHG 600
            ++ +VRHGET WN + ++QGQ D  L E G  QA+ VA+R AK   I+ I +SDL R   TA+ IA  C G  VI DP LRE  +G L+       ++      +  ++G  D  IP  GES+ ++  R   AL        G R  +V+HG
Sbjct:    3 QVYLVRHGETQWNAERRIQGQSDSPLTEKGERQAMQVAQR-AKALGITHIITSDLGRTQRTAEIIAQGC-GCDVILDPRLRELDMGILERRHLDTLSEEEEGWRRQLVNGTPDGRIP-QGESMQEVSERMHGALNACLDLPPGSRPLLVSHG 151          
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: Y2253_MYCBO (Uncharacterized protein Mb2253c OS=Mycobacterium bovis GN=Mb2253c PE=4 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.590e-16
Identity = 65/183 (35.52%), Postives = 95/183 (51.91%), Query Frame = 1
Query:   85 STESPAVMNGSSASVGPDYCEIIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDI-PGGGESLDQLYRRCTSALQRIARKHIGERIXVVTHGGVIRTLYQRA 630
            +TESP     + A   P    ++++RHG+T  + Q +  G+ +  LNEVG  Q  + A  LA+   I+ + SS L+RA +TA T A R   L V+ D +L E   G  +GL F EAA+  P  ++ +L    D  I P GGES D + RR      RI   + G  + VV+H   I+ L + A
Sbjct:  148 ATESPTSPGWTGARGTPT--RLLLLRHGQTELSEQRRYSGRGNPGLNEVGWRQVGAAAGYLARRGGIAAVVSSPLQRAYDTAVTAA-RALALDVVVDDDLVETDFGAWEGLTFAEAAERDPELHRRWLQ---DTSITPPGGESFDDVLRRVRRGRDRIIVGYEGATVLVVSHVTPIKMLLRLA 324          
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: Y2228_MYCTU (Uncharacterized protein Rv2228c/MT2287 OS=Mycobacterium tuberculosis GN=Rv2228c PE=4 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.590e-16
Identity = 65/183 (35.52%), Postives = 95/183 (51.91%), Query Frame = 1
Query:   85 STESPAVMNGSSASVGPDYCEIIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDI-PGGGESLDQLYRRCTSALQRIARKHIGERIXVVTHGGVIRTLYQRA 630
            +TESP     + A   P    ++++RHG+T  + Q +  G+ +  LNEVG  Q  + A  LA+   I+ + SS L+RA +TA T A R   L V+ D +L E   G  +GL F EAA+  P  ++ +L    D  I P GGES D + RR      RI   + G  + VV+H   I+ L + A
Sbjct:  148 ATESPTSPGWTGARGTPT--RLLLLRHGQTELSEQRRYSGRGNPGLNEVGWRQVGAAAGYLARRGGIAAVVSSPLQRAYDTAVTAA-RALALDVVVDDDLVETDFGAWEGLTFAEAAERDPELHRRWLQ---DTSITPPGGESFDDVLRRVRRGRDRIIVGYEGATVLVVSHVTPIKMLLRLA 324          
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMB_SALCH (Probable phosphoglycerate mutase gpmB OS=Salmonella choleraesuis GN=gpmB PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.124e-15
Identity = 56/152 (36.84%), Postives = 79/152 (51.97%), Query Frame = 1
Query:  145 EIIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIXVVTHG 600
            ++ +VRHGET WN + ++QGQ D  L   G +QA+ V ER A+   I+ I SSDL R   TA+ IA  C G  +  D  LRE  +G L+        +      +  ++G  D  IP GGES+ +L  R  +AL        G R  +V+HG
Sbjct:    3 QVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVGER-ARSLSITHIISSDLGRTKRTAEIIAQAC-GCDITFDSRLRELDMGVLEKRQIDSLTEEEEGWRRQLVNGTQDGRIP-GGESMQELSDRVHAALASCLELPQGSRPLLVSHG 151          
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMB_ENT38 (Probable phosphoglycerate mutase gpmB OS=Enterobacter sp. (strain 638) GN=gpmB PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.124e-15
Identity = 57/152 (37.50%), Postives = 82/152 (53.95%), Query Frame = 1
Query:  145 EIIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIXVVTHG 600
            ++ +VRHGET WN + ++QGQ D  L   G +QA  VAER A+   I+ I +SDL R  +TA+ IA+ C G  +I DP LRE  +G L+               +  ++G  D  IP  GES+ +L  R  +AL    +   G R  +V+HG
Sbjct:    3 QVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQARQVAER-ARTLGITHIIASDLGRTQQTARIIADAC-GCDIILDPRLRELDMGVLEKRHVDSLTDEEEGWRRTLVNGTEDGRIP-DGESMQELSVRVQAALADCLKLPEGSRPLLVSHG 151          
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMB_SALTY (Probable phosphoglycerate mutase gpmB OS=Salmonella typhimurium GN=gpmB PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.918e-15
Identity = 56/152 (36.84%), Postives = 79/152 (51.97%), Query Frame = 1
Query:  145 EIIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIXVVTHG 600
            ++ +VRHGET WN + ++QGQ D  L   G +QA+ V ER A+   I+ I SSDL R   TA+ IA  C G  +  D  LRE  +G L+        +      +  ++G  D  IP GGES+ +L  R  +AL        G R  +V+HG
Sbjct:    3 QVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVGER-ARSLGITHIISSDLGRTKRTAEIIAQAC-GCDITFDSRLRELDMGVLEKRQIDSLTEEEEGWRRQLVNGTQDGRIP-GGESMQELSDRVHAALASCLELPQGSRPLLVSHG 151          
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMB_SALSV (Probable phosphoglycerate mutase gpmB OS=Salmonella schwarzengrund (strain CVM19633) GN=gpmB PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.918e-15
Identity = 56/152 (36.84%), Postives = 79/152 (51.97%), Query Frame = 1
Query:  145 EIIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIXVVTHG 600
            ++ +VRHGET WN + ++QGQ D  L   G +QA+ V ER A+   I+ I SSDL R   TA+ IA  C G  +  D  LRE  +G L+        +      +  ++G  D  IP GGES+ +L  R  +AL        G R  +V+HG
Sbjct:    3 QVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVGER-ARSLGITHIISSDLGRTKRTAEIIAQAC-GCDITFDSRLRELDMGVLEKRQIDSLTEEEEGWRRQLVNGTQDGRIP-GGESMQELSDRVHAALASCLELPQGSRPLLVSHG 151          
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMB_SALPB (Probable phosphoglycerate mutase gpmB OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=gpmB PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.918e-15
Identity = 56/152 (36.84%), Postives = 79/152 (51.97%), Query Frame = 1
Query:  145 EIIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIXVVTHG 600
            ++ +VRHGET WN + ++QGQ D  L   G +QA+ V ER A+   I+ I SSDL R   TA+ IA  C G  +  D  LRE  +G L+        +      +  ++G  D  IP GGES+ +L  R  +AL        G R  +V+HG
Sbjct:    3 QVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVGER-ARSLGITHIISSDLGRTKRTAEIIAQAC-GCDITFDSRLRELDMGVLEKRQIDSLTEEEEGWRRQLVNGTQDGRIP-GGESMQELSDRVHAALASCLELPQGSRPLLVSHG 151          
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMB_SALPA (Probable phosphoglycerate mutase gpmB OS=Salmonella paratyphi A GN=gpmB PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.918e-15
Identity = 56/152 (36.84%), Postives = 79/152 (51.97%), Query Frame = 1
Query:  145 EIIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIXVVTHG 600
            ++ +VRHGET WN + ++QGQ D  L   G +QA+ V ER A+   I+ I SSDL R   TA+ IA  C G  +  D  LRE  +G L+        +      +  ++G  D  IP GGES+ +L  R  +AL        G R  +V+HG
Sbjct:    3 QVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVGER-ARSLGITHIISSDLGRTKRTAEIIAQAC-GCDITFDSRLRELDMGVLEKRQIDSLTEEEEGWRRQLVNGTQDGRIP-GGESMQELSDRVHAALASCLELPQGSRPLLVSHG 151          
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMB_SALNS (Probable phosphoglycerate mutase gpmB OS=Salmonella newport (strain SL254) GN=gpmB PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.918e-15
Identity = 56/152 (36.84%), Postives = 79/152 (51.97%), Query Frame = 1
Query:  145 EIIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIXVVTHG 600
            ++ +VRHGET WN + ++QGQ D  L   G +QA+ V ER A+   I+ I SSDL R   TA+ IA  C G  +  D  LRE  +G L+        +      +  ++G  D  IP GGES+ +L  R  +AL        G R  +V+HG
Sbjct:    3 QVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVGER-ARSLGITHIISSDLGRTKRTAEIIAQAC-GCDITFDSRLRELDMGVLEKRQIDSLTEEEEGWRRQLVNGTQDGRIP-GGESMQELSDRVHAALASCLELPQGSRPLLVSHG 151          
The following BLAST results are available for this feature:
BLAST of EY728715 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
GPMB_ENTS85.046e-1638.16Probable phosphoglycerate mutase gpmB OS=Enterobac... [more]
Y2253_MYCBO6.590e-1635.52Uncharacterized protein Mb2253c OS=Mycobacterium b... [more]
Y2228_MYCTU6.590e-1635.52Uncharacterized protein Rv2228c/MT2287 OS=Mycobact... [more]
GPMB_SALCH1.124e-1536.84Probable phosphoglycerate mutase gpmB OS=Salmonell... [more]
GPMB_ENT381.124e-1537.50Probable phosphoglycerate mutase gpmB OS=Enterobac... [more]
GPMB_SALTY1.918e-1536.84Probable phosphoglycerate mutase gpmB OS=Salmonell... [more]
GPMB_SALSV1.918e-1536.84Probable phosphoglycerate mutase gpmB OS=Salmonell... [more]
GPMB_SALPB1.918e-1536.84Probable phosphoglycerate mutase gpmB OS=Salmonell... [more]
GPMB_SALPA1.918e-1536.84Probable phosphoglycerate mutase gpmB OS=Salmonell... [more]
GPMB_SALNS1.918e-1536.84Probable phosphoglycerate mutase gpmB OS=Salmonell... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-007-F05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728715 ID=EY728715; Name=EY728715; organism=Citrus sinensis; type=EST; length=813bp
CCACGCGTCCGAAAAATCCCAAAACATTTCTGCGCGGAATCGGAACGGAT
TCAGAGGCACTCAAAACCCGGGAACATGGCCGAGTCAACGGAGTCTCCAG
CAGTCATGAACGGCAGCTCTGCCTCTGTTGGGCCTGATTATTGTGAGATC
ATTGTGGTGCGTCACGGTGAAACGCCTTGGAACGTTCAAGGAAAAGTTCA
GGGGCAGTTAGATGTTGAATTGAATGAAGTTGGAAGAGAGCAAGCTGTTT
CTGTGGCTGAGCGGCTGGCTAAGGAATTTAAAATTTCTGTTATCTATTCT
TCTGACCTGAAGCGAGCACTCGAAACTGCACAGACAATTGCAAACAGATG
TGGTGGGCTAAAGGTCATTGAAGATCCTGAACTAAGGGAAAGACATCTTG
GAGATCTTCAAGGCCTTGTTTTCCGTGAAGCAGCCAAAGTCTGTCCTATA
GCATATCAAGCATTTTTATCTGGCAAGACAGATCAAGATATCCCTGGTGG
TGGAGAAAGTCTTGATCAACTTTATCGACGGTGCACGTCTGCATTGCAGA
GAATTGCTAGGAAGCATATAGGAGAGCGAATANTAGTTGTGACTCATGGT
GGTGTAATCAGAACACTCTACCAACGGGCTTGCCCAAACAAAAAGCCTGA
AGGTAAGGTCCTGAATACTCTATCAACATATTTAGGTTGACTGAAAAAAC
AAGTGGGTCTTAAAAACTGGGGTGATGTTAGTCATCTCACCCAACAGGAT
TCTAAAGTCTGGTTTTGGTGGGGACTCACTTCCTGGTTATTCTGGGGCGG
GGCTCTGATGTGG
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