EY728715

Overview
NameEY728715
Unique NameEY728715
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length813
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11773 contig Csv1_Contig11773:1..817. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMB_SALHS (Probable phosphoglycerate mutase gpmB OS=Salmonella heidelberg (strain SL476) GN=gpmB PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.918e-15
Identity = 56/152 (36.84%), Postives = 79/152 (51.97%), Query Frame = 1
Query:  145 EIIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIXVVTHG 600
            ++ +VRHGET WN + ++QGQ D  L   G +QA+ V ER A+   I+ I SSDL R   TA+ IA  C G  +  D  LRE  +G L+        +      +  ++G  D  IP GGES+ +L  R  +AL        G R  +V+HG
Sbjct:    3 QVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVGER-ARSLGITHIISSDLGRTKRTAEIIAQAC-GCDITFDSRLRELDMGVLEKRQIDSLTEEEEGWRRQLVNGTQDGRIP-GGESMQELSDRVHAALASCLELPQGSRPLLVSHG 151          
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMB_SALG2 (Probable phosphoglycerate mutase gpmB OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=gpmB PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.918e-15
Identity = 56/152 (36.84%), Postives = 79/152 (51.97%), Query Frame = 1
Query:  145 EIIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIXVVTHG 600
            ++ +VRHGET WN + ++QGQ D  L   G +QA+ V ER A+   I+ I SSDL R   TA+ IA  C G  +  D  LRE  +G L+        +      +  ++G  D  IP GGES+ +L  R  +AL        G R  +V+HG
Sbjct:    3 QVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVGER-ARSLGITHIISSDLGRTKRTAEIIAQAC-GCDITFDSRLRELDMGVLEKRQIDSLTEEEEGWRRQLVNGTQDGRIP-GGESMQELSDRVHAALASCLELPQGSRPLLVSHG 151          
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMB_SALEP (Probable phosphoglycerate mutase gpmB OS=Salmonella enteritidis PT4 (strain P125109) GN=gpmB PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.918e-15
Identity = 56/152 (36.84%), Postives = 79/152 (51.97%), Query Frame = 1
Query:  145 EIIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIXVVTHG 600
            ++ +VRHGET WN + ++QGQ D  L   G +QA+ V ER A+   I+ I SSDL R   TA+ IA  C G  +  D  LRE  +G L+        +      +  ++G  D  IP GGES+ +L  R  +AL        G R  +V+HG
Sbjct:    3 QVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVGER-ARSLGITHIISSDLGRTKRTAEIIAQAC-GCDITFDSRLRELDMGVLEKRQIDSLTEEEEGWRRQLVNGTQDGRIP-GGESMQELSDRVHAALASCLELPQGSRPLLVSHG 151          
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMB_SALDC (Probable phosphoglycerate mutase gpmB OS=Salmonella dublin (strain CT_02021853) GN=gpmB PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.918e-15
Identity = 56/152 (36.84%), Postives = 79/152 (51.97%), Query Frame = 1
Query:  145 EIIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIXVVTHG 600
            ++ +VRHGET WN + ++QGQ D  L   G +QA+ V ER A+   I+ I SSDL R   TA+ IA  C G  +  D  LRE  +G L+        +      +  ++G  D  IP GGES+ +L  R  +AL        G R  +V+HG
Sbjct:    3 QVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVGER-ARSLGITHIISSDLGRTKRTAEIIAQAC-GCDITFDSRLRELDMGVLEKRQIDSLTEEEEGWRRQLVNGTQDGRIP-GGESMQELSDRVHAALASCLELPQGSRPLLVSHG 151          
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMB_SALA4 (Probable phosphoglycerate mutase gpmB OS=Salmonella agona (strain SL483) GN=gpmB PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.918e-15
Identity = 56/152 (36.84%), Postives = 79/152 (51.97%), Query Frame = 1
Query:  145 EIIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIXVVTHG 600
            ++ +VRHGET WN + ++QGQ D  L   G +QA+ V ER A+   I+ I SSDL R   TA+ IA  C G  +  D  LRE  +G L+        +      +  ++G  D  IP GGES+ +L  R  +AL        G R  +V+HG
Sbjct:    3 QVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVGER-ARSLGITHIISSDLGRTKRTAEIIAQAC-GCDITFDSRLRELDMGVLEKRQIDSLTEEEEGWRRQLVNGTQDGRIP-GGESMQELSDRVHAALASCLELPQGSRPLLVSHG 151          
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMB_ERWT9 (Probable phosphoglycerate mutase gpmB OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=gpmB PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.271e-15
Identity = 53/158 (33.54%), Postives = 83/158 (52.53%), Query Frame = 1
Query:  145 EIIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIXVVTHGGVIRTL 618
            ++ +VRHGET WN   ++QGQ D  L E G +QA  V +R+ ++  I+ + +SDL R   TA+ IA+ C G  V+ DP LRE ++G L+       +       +A + G  +  IP  GES+ ++ +R   AL          R  +V+HG  +  L
Sbjct:    3 QVYLVRHGETLWNAARRIQGQSDSALTEKGEQQAYQVGQRV-RDLGITHVIASDLGRTRRTAEIIADAC-GCSVVLDPRLRELNMGVLEQRKLDSLSAEEESWRKALVDGTENGRIP-QGESMSEMAQRMRQALDACLSLPENSRPLIVSHGMALGVL 157          
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMB_SALTI (Probable phosphoglycerate mutase gpmB OS=Salmonella typhi GN=gpmB PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.272e-15
Identity = 56/152 (36.84%), Postives = 79/152 (51.97%), Query Frame = 1
Query:  145 EIIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIXVVTHG 600
            ++ +VRHGET WN + ++QGQ D  L   G +QA+ V ER A+   I+ I SSDL R   TA+ IA  C G  +  D  LRE  +G L+        +      +  ++G  D  IP GGES+ +L  R  +AL        G R  +V+HG
Sbjct:    3 QVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVGER-ARSLGITHIISSDLGRTKRTAEIIAQAC-GCDITFDFRLRELDMGVLEKRQIDSLTEEEEGWRRQLVNGTQDGRIP-GGESMQELSDRVHAALASCLELPQGSRPLLVSHG 151          
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMA_CYTH3 (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=gpmA PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.272e-15
Identity = 51/160 (31.87%), Postives = 82/160 (51.25%), Query Frame = 1
Query:  148 IIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGG-LKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHI--GERIXVVTHGGVIRTL 618
            +++VRHG++ WN++    G  DVEL   G  +A   A  + + +   + ++S LKRA+ T   I N+ G  + +IE+  L ER+ GDLQGL   E  +    A Q     ++  ++P GGESL+   +R     Q      +  G  + +V HG  +R L
Sbjct:    4 LVIVRHGQSEWNLKNLFTGWSDVELTPTGEHEA-EYAGIVLRPYHFDIAFTSVLKRAIHTLSIILNQTGATIPIIENEALNERNYGDLQGLNKAEVGEKYG-AQQLIAWRRSYTEVPPGGESLENTCQRVIPYYQEKIEPELKDGRNVLIVAHGNSLRAL 161          
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMB_SALAR (Probable phosphoglycerate mutase gpmB OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=gpmB PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.287e-15
Identity = 55/152 (36.18%), Postives = 78/152 (51.32%), Query Frame = 1
Query:  145 EIIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIXVVTHG 600
            ++ +VRHGET WN + ++QGQ D  L   G +QA+ V ER A+   I+ I SSDL R   TA+ IA  C G  +  D  LRE  +G L+        +      +  ++G  D  IP  GES+ +L  R  +AL        G R  +V+HG
Sbjct:    3 QVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVGER-ARSLGITHIISSDLGRTKRTAEIIAQAC-GCDITFDSRLRELDMGVLEKRQIDSLTEEEEGWRRQLVNGTQDGRIP-DGESMQELSERVHAALASCLELPQGSRPLLVSHG 151          
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMB_SALPC (Probable phosphoglycerate mutase gpmB OS=Salmonella paratyphi C (strain RKS4594) GN=gpmB PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.517e-15
Identity = 55/152 (36.18%), Postives = 78/152 (51.32%), Query Frame = 1
Query:  145 EIIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIXVVTHG 600
            ++ +VRHGET WN + ++QGQ D  L   G +QA+ V ER A+    + I SSDL R   TA+ IA  C G  +  D  LRE  +G L+        +      +  ++G  D  IP GGES+ +L  R  +AL        G R  +V+HG
Sbjct:    3 QVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVGER-ARSLGSTHIISSDLGRTKRTAEIIAQAC-GCDITFDSRLRELDMGVLEKRQIDSLTEEEEGWRRQLVNGTQDGRIP-GGESMQELSDRVHAALASCLELPQGSRPLLVSHG 151          
The following BLAST results are available for this feature:
BLAST of EY728715 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
GPMB_SALHS1.918e-1536.84Probable phosphoglycerate mutase gpmB OS=Salmonell... [more]
GPMB_SALG21.918e-1536.84Probable phosphoglycerate mutase gpmB OS=Salmonell... [more]
GPMB_SALEP1.918e-1536.84Probable phosphoglycerate mutase gpmB OS=Salmonell... [more]
GPMB_SALDC1.918e-1536.84Probable phosphoglycerate mutase gpmB OS=Salmonell... [more]
GPMB_SALA41.918e-1536.84Probable phosphoglycerate mutase gpmB OS=Salmonell... [more]
GPMB_ERWT93.271e-1533.54Probable phosphoglycerate mutase gpmB OS=Erwinia t... [more]
GPMB_SALTI4.272e-1536.84Probable phosphoglycerate mutase gpmB OS=Salmonell... [more]
GPMA_CYTH34.272e-1531.882,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMB_SALAR7.287e-1536.18Probable phosphoglycerate mutase gpmB OS=Salmonell... [more]
GPMB_SALPC9.517e-1536.18Probable phosphoglycerate mutase gpmB OS=Salmonell... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-007-F05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728715 ID=EY728715; Name=EY728715; organism=Citrus sinensis; type=EST; length=813bp
CCACGCGTCCGAAAAATCCCAAAACATTTCTGCGCGGAATCGGAACGGAT
TCAGAGGCACTCAAAACCCGGGAACATGGCCGAGTCAACGGAGTCTCCAG
CAGTCATGAACGGCAGCTCTGCCTCTGTTGGGCCTGATTATTGTGAGATC
ATTGTGGTGCGTCACGGTGAAACGCCTTGGAACGTTCAAGGAAAAGTTCA
GGGGCAGTTAGATGTTGAATTGAATGAAGTTGGAAGAGAGCAAGCTGTTT
CTGTGGCTGAGCGGCTGGCTAAGGAATTTAAAATTTCTGTTATCTATTCT
TCTGACCTGAAGCGAGCACTCGAAACTGCACAGACAATTGCAAACAGATG
TGGTGGGCTAAAGGTCATTGAAGATCCTGAACTAAGGGAAAGACATCTTG
GAGATCTTCAAGGCCTTGTTTTCCGTGAAGCAGCCAAAGTCTGTCCTATA
GCATATCAAGCATTTTTATCTGGCAAGACAGATCAAGATATCCCTGGTGG
TGGAGAAAGTCTTGATCAACTTTATCGACGGTGCACGTCTGCATTGCAGA
GAATTGCTAGGAAGCATATAGGAGAGCGAATANTAGTTGTGACTCATGGT
GGTGTAATCAGAACACTCTACCAACGGGCTTGCCCAAACAAAAAGCCTGA
AGGTAAGGTCCTGAATACTCTATCAACATATTTAGGTTGACTGAAAAAAC
AAGTGGGTCTTAAAAACTGGGGTGATGTTAGTCATCTCACCCAACAGGAT
TCTAAAGTCTGGTTTTGGTGGGGACTCACTTCCTGGTTATTCTGGGGCGG
GGCTCTGATGTGG
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