EY728715

Overview
NameEY728715
Unique NameEY728715
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length813
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11773 contig Csv1_Contig11773:1..817. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMB_PROMH (Probable phosphoglycerate mutase gpmB OS=Proteus mirabilis (strain HI4320) GN=gpmB PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.517e-15
Identity = 58/152 (38.16%), Postives = 78/152 (51.32%), Query Frame = 1
Query:  145 EIIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIXVVTHG 600
            ++ +VRHGET WNV  ++QGQ D  L  +G  QA  VAER+ K   I+ I SSDL R  +TA+ IA  C    VI DP LRE  +G L+               ++ + G  D  IP  GES+ +L  R  +AL          R  +V+HG
Sbjct:    3 QVYLVRHGETEWNVARRIQGQSDSPLTAMGVRQAQQVAERV-KSAGITHIISSDLGRTCQTAEIIAQAC-RCDVITDPRLRELDMGVLEQREIATLNTQEEAWRKSLIDGTPDGRIP-QGESMVELANRMQAALNSCLALPEHSRPLLVSHG 151          
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMB_KLEP7 (Probable phosphoglycerate mutase gpmB OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=gpmB PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.517e-15
Identity = 56/152 (36.84%), Postives = 78/152 (51.32%), Query Frame = 1
Query:  145 EIIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIXVVTHG 600
            ++ +VRHGET WN + ++QGQ D  L   G  QA  V ER A+   I+ I +SDL R   TA+ IA  C G  VI D  LRE  +G L+       ++      +  ++G  D  IP  GES+ +L  R  +AL        G R  +V+HG
Sbjct:    3 QVYLVRHGETQWNAERRIQGQSDSPLTAHGERQAWQVGER-ARTLGITHIITSDLGRTRRTAEIIAEAC-GCSVIADARLRELDMGVLEKRHIDSLSEEEEGWRRQLVNGTPDGRIP-QGESMQELSERMHAALASCLELPAGSRPLLVSHG 151          
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMB_CITK8 (Probable phosphoglycerate mutase gpmB OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=gpmB PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.517e-15
Identity = 55/152 (36.18%), Postives = 78/152 (51.32%), Query Frame = 1
Query:  145 EIIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIXVVTHG 600
            ++ +VRHGET WN + ++QGQ D  L   G +QA+ V ER A+   I+ I SSDL R   TA+ IA  C G  +  D  LRE  +G L+        +      +  ++G  D  IP  GES+ +L  R  +AL        G R  +V+HG
Sbjct:    3 QVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVGER-ARTLGITHIVSSDLGRTRRTAEIIAQAC-GCDITFDARLRELDMGVLEKRHIDTLTEEEENWRRQLVNGTVDGRIP-DGESMQELSDRVNAALASCLELPQGSRPLLVSHG 151          
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMB_KLEP3 (Probable phosphoglycerate mutase gpmB OS=Klebsiella pneumoniae (strain 342) GN=gpmB PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.623e-14
Identity = 56/152 (36.84%), Postives = 77/152 (50.66%), Query Frame = 1
Query:  145 EIIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIXVVTHG 600
            ++ +VRHGET WN + ++QGQ D  L   G  QA  V ER A+   I+ I +SDL R   TA+ IA  C G  VI D  LRE  +G L+       +       +  ++G  D  IP  GES+ +L  R  +AL        G R  +V+HG
Sbjct:    3 QVYLVRHGETQWNAERRIQGQSDSPLTAHGERQAWQVGER-ARTLGITHIITSDLGRTRRTAEIIAEAC-GCSVIADARLRELDMGVLEKRHIDSLSDEEEGWRRQLVNGTPDGRIP-QGESMQELSERMHAALASCLELPAGSRPLLVSHG 151          
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMB_SALPK (Probable phosphoglycerate mutase gpmB OS=Salmonella paratyphi A (strain AKU_12601) GN=gpmB PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.769e-14
Identity = 55/152 (36.18%), Postives = 78/152 (51.32%), Query Frame = 1
Query:  145 EIIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIXVVTHG 600
            ++ +VRHGET WN + ++QGQ D  L   G +QA+ V ER A+   I+ I SSDL R   TA+ IA  C G  +  D  LRE  +G L+        +      +  ++G  D  I  GGES+ +L  R  +AL        G R  +V+HG
Sbjct:    3 QVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVGER-ARSLGITHIISSDLGRTKRTAEIIAQAC-GCDITFDSRLRELDMGVLEKRQIDSLTEEEEGWRRQLVNGTQDGRIL-GGESMQELSDRVHAALASCLELPQGSRPLLVSHG 151          
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: PMGY_SCHPO (Phosphoglycerate mutase OS=Schizosaccharomyces pombe GN=gpm1 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.222e-13
Identity = 53/162 (32.72%), Postives = 81/162 (50.00%), Query Frame = 1
Query:  148 IIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERL-AKEFKISVIYSSDLKRALETAQTIANRCG--GLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHI--GERIXVVTHGGVIRTL 618
            +++ RHGE+ WN      G  D  L+E G ++A    ERL ++ +K  + ++S L+RA +T Q I    G   L+ I+  +L ER+ GDLQGL   +A K    A Q  +  ++    P  GESL     R     +     HI  GE++ +  HG  +R L
Sbjct:   10 LVLTRHGESEWNKLNLFTGWKDPALSETGIKEAKLGGERLKSRGYKFDIAFTSALQRAQKTCQIILEEVGEPNLETIKSEKLNERYYGDLQGLNKDDARKKWG-AEQVQIWRRSYDIAPPNGESLKDTAERVLPYYKSTIVPHILKGEKVLIAAHGNSLRAL 170          
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMA_OCHA4 (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=gpmA PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.222e-13
Identity = 59/182 (32.42%), Postives = 85/182 (46.70%), Query Frame = 1
Query:  148 IIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERL-AKEFKISVIYSSDLKRALETAQTIANRCG--GLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHI--GERIXVVTHGGVIRTLYQRACPNKKPEGKVLNTLST 678
            +++VRHG++ WN++    G  D  L E G  +A +  +RL A   K  + Y+S L RA  T Q I ++ G   LK I D  L ER  GDL GL  ++ A+      Q  +  ++    P GGESL     R         + H+  GE + V  HG  +R L   A     PE  +   L+T
Sbjct:    5 LVLVRHGQSEWNLKNLFTGWRDPGLTEQGHAEAKAAGQRLKAAGLKFDIAYTSALSRAQVTCQHILDQLGQSDLKTIRDQALNERDYGDLSGL-NKDDARAKWGEEQVHIWRRSYDVPPPGGESLKDTGARVWPYYLHTVQPHVLRGETVLVAAHGNSLRALIM-ALDGLTPEQILKQELNT 184          
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMA_RHILO (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Rhizobium loti GN=gpmA PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.907e-13
Identity = 53/162 (32.72%), Postives = 79/162 (48.77%), Query Frame = 1
Query:  148 IIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERL-AKEFKISVIYSSDLKRALETAQTIANRCG--GLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHI--GERIXVVTHGGVIRTL 618
            +++VRHG++ WN++    G  DV+L E G  +A +  ++L A+  K  + ++S L RA +T Q I +  G   LK I D  L ER  GDL GL   +A K      Q  +  ++    P GGESL     R         + H+  G  + V  HG  +R L
Sbjct:    5 LVLVRHGQSEWNLKNLFTGWRDVDLTEQGHAEAKAAGQKLKARGLKFDIAFTSALSRAQKTCQHILDAVGQSDLKTIRDQALNERDYGDLSGLNKDDARKKWG-EEQVHVWRRSYDVSPPGGESLKDTGARVWPYYLHDLQPHVLRGGTVLVAAHGNSLRAL 165          
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMA_BRUO2 (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=gpmA PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.907e-13
Identity = 59/182 (32.42%), Postives = 85/182 (46.70%), Query Frame = 1
Query:  148 IIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERL-AKEFKISVIYSSDLKRALETAQTIANRCG--GLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHI--GERIXVVTHGGVIRTLYQRACPNKKPEGKVLNTLST 678
            +++VRHG++ WN++    G  D  L E G  +A +  +RL A   K  + Y+S L RA  T Q I +  G  GL+ I D  L ER  GDL GL  ++ A+      Q  +  ++    P GGESL     R         + H+   E + V  HG  +RTL   A     PE  +   L+T
Sbjct:    5 LVLVRHGQSEWNLKNLFTGWRDPGLTEQGHAEAKAAGQRLKAAGLKFDIAYTSALSRAQVTCQHILDELGQPGLETIRDQALNERDYGDLSGL-NKDDARAKWGEEQVHIWRRSYDVPPPGGESLKDTGARVWPYYLHTIQPHVLREETVLVAAHGNSLRTLIM-ALDGLTPEQILKQELNT 184          
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMA_UNCTG (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Uncultured termite group 1 bacterium phylotype Rs-D17 GN=gpmA PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.163e-12
Identity = 55/188 (29.26%), Postives = 90/188 (47.87%), Query Frame = 1
Query:  145 EIIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKE-FKISVIYSSDLKRALETAQTIANRCGGL--KVIEDPELRERHLGDLQGL---------------VFREAAKVCPIAY----------QAFLSGKTDQDIPGGGESLDQLYRRCTS--ALQRIARKHIGERIXVVTHGGVIRTL 618
            +++++RHGE+ WN + K  G  DV+L+E G E+A+   ++L K+ F   + Y+S LKRA++T   + N    L   V++D  L ERH G LQGL               ++R +  + P+A           +A  SG    +IP   E L     R       + + +   G++I +  HG  +R L
Sbjct:    3 KVVLIRHGESVWNKENKFTGWSDVDLSEKGNEEALKAGKQLKKDGFTFDLAYTSVLKRAIKTLWNVLNTMDLLWTPVVKDWRLNERHYGALQGLNKAETAAKYGEEQVKIWRRSYDIAPMALDENDERYPGKEARYSGLLKGEIP-LAECLKDTVARVVPYWGKEVVPQIKAGKKIIIAAHGNSLRAL 189          
The following BLAST results are available for this feature:
BLAST of EY728715 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
GPMB_PROMH9.517e-1538.16Probable phosphoglycerate mutase gpmB OS=Proteus m... [more]
GPMB_KLEP79.517e-1536.84Probable phosphoglycerate mutase gpmB OS=Klebsiell... [more]
GPMB_CITK89.517e-1536.18Probable phosphoglycerate mutase gpmB OS=Citrobact... [more]
GPMB_KLEP31.623e-1436.84Probable phosphoglycerate mutase gpmB OS=Klebsiell... [more]
GPMB_SALPK2.769e-1436.18Probable phosphoglycerate mutase gpmB OS=Salmonell... [more]
PMGY_SCHPO5.222e-1332.72Phosphoglycerate mutase OS=Schizosaccharomyces pom... [more]
GPMA_OCHA45.222e-1332.422,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_RHILO8.907e-1332.722,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_BRUO28.907e-1332.422,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_UNCTG1.163e-1229.262,3-bisphosphoglycerate-dependent phosphoglycerate... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-007-F05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728715 ID=EY728715; Name=EY728715; organism=Citrus sinensis; type=EST; length=813bp
CCACGCGTCCGAAAAATCCCAAAACATTTCTGCGCGGAATCGGAACGGAT
TCAGAGGCACTCAAAACCCGGGAACATGGCCGAGTCAACGGAGTCTCCAG
CAGTCATGAACGGCAGCTCTGCCTCTGTTGGGCCTGATTATTGTGAGATC
ATTGTGGTGCGTCACGGTGAAACGCCTTGGAACGTTCAAGGAAAAGTTCA
GGGGCAGTTAGATGTTGAATTGAATGAAGTTGGAAGAGAGCAAGCTGTTT
CTGTGGCTGAGCGGCTGGCTAAGGAATTTAAAATTTCTGTTATCTATTCT
TCTGACCTGAAGCGAGCACTCGAAACTGCACAGACAATTGCAAACAGATG
TGGTGGGCTAAAGGTCATTGAAGATCCTGAACTAAGGGAAAGACATCTTG
GAGATCTTCAAGGCCTTGTTTTCCGTGAAGCAGCCAAAGTCTGTCCTATA
GCATATCAAGCATTTTTATCTGGCAAGACAGATCAAGATATCCCTGGTGG
TGGAGAAAGTCTTGATCAACTTTATCGACGGTGCACGTCTGCATTGCAGA
GAATTGCTAGGAAGCATATAGGAGAGCGAATANTAGTTGTGACTCATGGT
GGTGTAATCAGAACACTCTACCAACGGGCTTGCCCAAACAAAAAGCCTGA
AGGTAAGGTCCTGAATACTCTATCAACATATTTAGGTTGACTGAAAAAAC
AAGTGGGTCTTAAAAACTGGGGTGATGTTAGTCATCTCACCCAACAGGAT
TCTAAAGTCTGGTTTTGGTGGGGACTCACTTCCTGGTTATTCTGGGGCGG
GGCTCTGATGTGG
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