EY728715

Overview
NameEY728715
Unique NameEY728715
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length813
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11773 contig Csv1_Contig11773:1..817. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMA_AZOC5 (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=gpmA PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.774e-12
Identity = 60/182 (32.97%), Postives = 84/182 (46.15%), Query Frame = 1
Query:  148 IIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKE-FKISVIYSSDLKRALETAQTIANRCG--GLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESL-DQLYRRCTSALQRIARKHI-GERIXVVTHGGVIRTLYQRACPNKKPEGKVLNTLST 678
            +++VRHG++ WN++    G  D  L + G  +A      LA E     V Y+S L RA  T Q +    G  GL+ I D  L ER  GDL GL  ++ A+      Q  +  ++    P GGESL D + R     +Q I    + GER  V  HG  +R L         PEG +   L+T
Sbjct:    5 LVLVRHGQSEWNLKNLFTGWRDPNLTDQGVSEARRAGALLAAEGLSFDVAYTSALTRAQRTCQLVLEEMGLTGLRTIADQALNERDYGDLSGL-NKDDARAKFGEEQVHVWRRSYDISPPGGESLRDTVARVLPYFVQEILPSVLRGERTLVAAHGNSLRALVM-VLERLSPEGIMKRELAT 184          
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMA_AGRVS (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=gpmA PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.774e-12
Identity = 53/166 (31.93%), Postives = 86/166 (51.81%), Query Frame = 1
Query:  148 IIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKEFKI--SVIYSSDLKRALETAQTIANRCG--GLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRR-----CTSALQRIARKHIGERIXVVTHGGVIRTL 618
            +++VRHG++ WN++    G  D +L ++G ++A +   +  K++ I   + ++SDL RA +T   I +  G  GL+ I D  L ER  GDL GL  ++ A+      Q  +  ++    P GGESL     R      T  L R+ R   GE++ V  HG  +R+L
Sbjct:    5 LVLVRHGQSDWNLKNLFTGWRDPDLTDLGVQEA-NAGGKALKDYGIQFDIAFTSDLSRAQKTCGIILDNLGQSGLETIRDQALNERDYGDLSGL-NKDDARAKWGEEQVHIWRRSYDIPPPGGESLRDTGARVWPYYLTEILPRVLR---GEKVLVAAHGNSLRSL 165          
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: YFFL_SCHPO (Probable phosphoglycerate mutase C1687.21 OS=Schizosaccharomyces pombe GN=SPAC1687.21 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.848e-12
Identity = 62/215 (28.84%), Postives = 95/215 (44.19%), Query Frame = 1
Query:  145 EIIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGER--IXVVTHGGVIRTLYQRACPNK-------KPEGKVL--NTLSTYLG*LKKQVG-LKNWGDVSHLTQQDS 753
            ++ ++RHG+T  N +G +QG +D  LNE GR QA  +A+RL     I  I+ S +KR  ET          + ++    +RER  GDL+G+   EA K+    +               GE L  L  R             G++  + V+ HGGVI  L       K       K E K++  NT  T +   +   G +  +GD SHL  +++
Sbjct:    2 KVFLIRHGQTDQNKRGILQGSVDTNLNETGRLQAKLLAQRLL-PLDIDQIFCSSMKRCRETIAPYLELKPEVPIVYTDLIRERVYGDLEGMNVVEAKKLLNANHPDHY-----------GEGLSHLTSRLLKFWDEYVVPLQGKKKCVIVLCHGGVINVLRTHFMEEKGFTFDKSKLESKIITFNTSITEIEVTEHGTGHIHTFGDASHLESEET 204          
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMA_PARL1 (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=gpmA PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.848e-12
Identity = 51/162 (31.48%), Postives = 80/162 (49.38%), Query Frame = 1
Query:  148 IIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERL-AKEFKISVIYSSDLKRALETAQTIANRC--GGLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQR--IARKHIGERIXVVTHGGVIRTL 618
            +++VRHG++ WN +    G  D  L E G E+A    + + AK     V Y+S L RA ET + +      G +++IE+  L ER  GDL GL  ++ A+      Q  +  ++    P GGESL     R     ++  + R   GER+ +  HG  +R+L
Sbjct:    5 LVLVRHGQSEWNKKNLFTGWRDPGLTEQGMEEAREAGQAIKAKGLVFDVAYTSALSRAQETNRIVLEELGQGDIEIIENEALNERDYGDLSGL-NKDDAREKWGEEQVHIWRRSYDIPPPGGESLKMTAERVLPYFEKEILPRVLKGERVLIAAHGNSLRSL 165          
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMA_RHIL3 (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=gpmA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.286e-11
Identity = 55/165 (33.33%), Postives = 83/165 (50.30%), Query Frame = 1
Query:  148 IIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAK-EFKISVIYSSDLKRALETAQTIANRCG--GLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRR-----CTSALQRIARKHIGERIXVVTHGGVIRTL 618
            +++VRHG++ WN++    G  D +L E+G ++A +    LA+   K  V Y+S L RA  T + I ++ G   L  I D  L ER  GDL GL  ++ A+      Q  +  ++    P GGESL     R      T  L R+ R   GE++ V  HG  +R+L
Sbjct:    5 LVLVRHGQSDWNLKNLFTGWKDPDLTELGIQEANTGGAALAEYGIKFDVAYTSVLVRAQHTLKLILDKVGQPDLLTIRDQALNERDYGDLSGL-NKDDARAKWGEEQVHIWRRSYDVPPPGGESLRDTGARVWPYYLTEILPRVLR---GEKVLVAAHGNSLRSL 165          
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMA_BARBK (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=gpmA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.286e-11
Identity = 50/162 (30.86%), Postives = 82/162 (50.62%), Query Frame = 1
Query:  148 IIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKE-FKISVIYSSDLKRALETAQTIANRCG--GLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHI--GERIXVVTHGGVIRTL 618
            +++VRHG++ WN++    G  D +L E GR +A++  + L K   K  + Y+S L+RA +TAQ I  +     L++I++  L ER  GDL GL  ++ A+      Q  +  ++    P  GESL     R         + HI   + + +V HG  +R L
Sbjct:    5 LVLVRHGQSEWNIKNLFTGWKDPDLTEKGRTEAITAGKNLKKAGLKFDIAYTSALQRAQKTAQHILEQMAQPDLQLIKNSALNERDYGDLSGL-NKDDARQRWGQEQVHIWRRSYTIAPPNGESLRDTGARVWPYYFHHIQPHILRSQTVLIVAHGNSLRAL 165          
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMA2_GLOVI (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 2 OS=Gloeobacter violaceus GN=gpmA2 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.286e-11
Identity = 55/165 (33.33%), Postives = 82/165 (49.70%), Query Frame = 1
Query:  148 IIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCG--GLKVIEDPELRERHLGDLQGLVFREAA----KVCPIAYQAFLSGKTDQDIPGGGESL-DQLYRRCTSALQRIARK-HIGERIXVVTHGGVIRTL 618
            +++VRHG++ WN++ +  G  DV L E GR +A +  E L      +V ++S L RA +T + I        + VIED  L ERH G+LQGL   E A    +     ++  L G+     P GGESL D   R      ++I  +   G+ + V  HG  IR +
Sbjct:    4 LVMVRHGQSIWNLENRFTGWTDVPLTEKGRAEARACGE-LIYCVPFAVAFTSKLTRAQDTLRLILEAADQPDVPVIEDQALNERHYGELQGLNKAETAAKYGEETVRQWRRSLEGR-----PPGGESLKDTALRSLRYFYEKIVPELEAGKNVLVSAHGNTIRAI 162          
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMA_RHILW (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=gpmA PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.680e-11
Identity = 54/165 (32.73%), Postives = 83/165 (50.30%), Query Frame = 1
Query:  148 IIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAK-EFKISVIYSSDLKRALETAQTIANRCG--GLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRR-----CTSALQRIARKHIGERIXVVTHGGVIRTL 618
            +++VRHG++ WN++    G  D +L  +G E+A +  + LA+   K  + Y+S L RA  T + I ++ G   L  I D  L ER  GDL GL  ++ A+      Q  +  ++    P GGESL     R      T  L R+ R   GE++ V  HG  +R+L
Sbjct:    5 LVLVRHGQSDWNLKNLFTGWKDPDLTALGIEEANAGGKALAEYGIKFDIAYTSVLVRAQHTLKLILDKVGQPDLPTIRDQALNERDYGDLSGL-NKDDARAKWGEEQVHIWRRSYDVPPPGGESLRDTGARVWPYYLTEILPRVLR---GEKVLVAAHGNSLRSL 165          
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMA_RHIE6 (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Rhizobium etli (strain CIAT 652) GN=gpmA PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.194e-11
Identity = 54/165 (32.73%), Postives = 83/165 (50.30%), Query Frame = 1
Query:  148 IIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAK-EFKISVIYSSDLKRALETAQTIANRCG--GLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRR-----CTSALQRIARKHIGERIXVVTHGGVIRTL 618
            +++VRHG++ WN++    G  D +L E+G ++A +    LA+   K  V Y+S L RA  T + I ++ G   L+ I D  L ER  GDL GL  ++ A+      Q  +  ++    P GGESL     R      T  L R+     GE++ V  HG  +R+L
Sbjct:    5 LVLVRHGQSDWNLKNLFTGWKDPDLTELGIQEANAGGAALAEYGIKFDVAYTSALVRAQHTLKLILDKVGQPDLQTIRDQALNERDYGDLSGL-NKDDARAKWGEEQVHVWRRSYDVPPPGGESLRDTGARVWPYYLTEILPRVLH---GEKVLVAAHGNSLRSL 165          
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMA_RHIME (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Rhizobium meliloti GN=gpmA PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.865e-11
Identity = 53/165 (32.12%), Postives = 82/165 (49.70%), Query Frame = 1
Query:  148 IIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAK-EFKISVIYSSDLKRALETAQTIANRCG--GLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRR-----CTSALQRIARKHIGERIXVVTHGGVIRTL 618
            +++VRHG++ WN++    G  D +L E+G E+A +  + LA    K  + ++S L RA  T Q + +  G   L+ I D  L ER  GDL GL  ++ A+      Q  +  ++    P GGESL     R      T  L R+     GE++ V  HG  +R+L
Sbjct:    5 LVLVRHGQSDWNLKNLFTGWRDPDLTELGIEEAKAGGKALADYGIKFDIAFTSVLIRAQRTCQLVLDAVGQSSLETIRDQALNERDYGDLSGL-NKDDARAKWGEEQVHIWRRSYDVPPPGGESLRDTGARVWPYYLTDILPRVLS---GEKVLVAAHGNSLRSL 165          
The following BLAST results are available for this feature:
BLAST of EY728715 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
GPMA_AZOC55.774e-1232.972,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_AGRVS5.774e-1231.932,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
YFFL_SCHPO9.848e-1228.84Probable phosphoglycerate mutase C1687.21 OS=Schiz... [more]
GPMA_PARL19.848e-1231.482,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_RHIL31.286e-1133.332,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_BARBK1.286e-1130.862,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA2_GLOVI1.286e-1133.332,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_RHILW1.680e-1132.732,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_RHIE62.194e-1132.732,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_RHIME2.865e-1132.122,3-bisphosphoglycerate-dependent phosphoglycerate... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-007-F05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728715 ID=EY728715; Name=EY728715; organism=Citrus sinensis; type=EST; length=813bp
CCACGCGTCCGAAAAATCCCAAAACATTTCTGCGCGGAATCGGAACGGAT
TCAGAGGCACTCAAAACCCGGGAACATGGCCGAGTCAACGGAGTCTCCAG
CAGTCATGAACGGCAGCTCTGCCTCTGTTGGGCCTGATTATTGTGAGATC
ATTGTGGTGCGTCACGGTGAAACGCCTTGGAACGTTCAAGGAAAAGTTCA
GGGGCAGTTAGATGTTGAATTGAATGAAGTTGGAAGAGAGCAAGCTGTTT
CTGTGGCTGAGCGGCTGGCTAAGGAATTTAAAATTTCTGTTATCTATTCT
TCTGACCTGAAGCGAGCACTCGAAACTGCACAGACAATTGCAAACAGATG
TGGTGGGCTAAAGGTCATTGAAGATCCTGAACTAAGGGAAAGACATCTTG
GAGATCTTCAAGGCCTTGTTTTCCGTGAAGCAGCCAAAGTCTGTCCTATA
GCATATCAAGCATTTTTATCTGGCAAGACAGATCAAGATATCCCTGGTGG
TGGAGAAAGTCTTGATCAACTTTATCGACGGTGCACGTCTGCATTGCAGA
GAATTGCTAGGAAGCATATAGGAGAGCGAATANTAGTTGTGACTCATGGT
GGTGTAATCAGAACACTCTACCAACGGGCTTGCCCAAACAAAAAGCCTGA
AGGTAAGGTCCTGAATACTCTATCAACATATTTAGGTTGACTGAAAAAAC
AAGTGGGTCTTAAAAACTGGGGTGATGTTAGTCATCTCACCCAACAGGAT
TCTAAAGTCTGGTTTTGGTGGGGACTCACTTCCTGGTTATTCTGGGGCGG
GGCTCTGATGTGG
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