EY728715

Overview
NameEY728715
Unique NameEY728715
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length813
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11773 contig Csv1_Contig11773:1..817. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMA_CYAP7 (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Cyanothece sp. (strain PCC 7424) GN=gpmA PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.742e-11
Identity = 57/203 (28.08%), Postives = 91/203 (44.83%), Query Frame = 1
Query:  145 EIIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKE-FKISVIYSSDLKRALETA----QTIANRCGG---------------------------LKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHI--GERIXVVTHGGVIRTLYQRACPNKKPE 651
            ++I++RHG++ WN   K  G +D+ L+  GR +A+  A +L ++ ++I V ++S L RA+ETA          CGG                           L +     L ER+ GDLQGL   + A+    + Q     ++    P GGESL+   +R     +     HI  G+ + V  HG  +R +  R   N +PE
Sbjct:    3 KLILIRHGQSLWNAANKFTGWVDIPLSRRGRAEAMIAASKLQEQGYRIDVCFTSLLIRAMETAIIALTEYEQLCGGKTPIFKHDADDLDWHGWDKYDGDPKEELPIFPSQALDERYYGDLQGLNKAQTAQKYG-SEQVHEWRRSYFTRPPGGESLEDTQKRVIPYFENRILTHIAHGDTVMVAAHGNSLRAMIMR-LENLQPE 203          
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMA_BARHE (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Bartonella henselae GN=gpmA PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.742e-11
Identity = 48/162 (29.63%), Postives = 80/162 (49.38%), Query Frame = 1
Query:  148 IIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKE-FKISVIYSSDLKRALETAQTIANRC--GGLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHI--GERIXVVTHGGVIRTL 618
            ++++RHG++ WN++    G  D  L E GR +A++  ++L +   K  + Y+S L+RA +TAQ I  +     L++I+ P L ER+ GDL GL   E  +      Q  +  ++    P  GESL     R         + HI   + + +  HG  +R L
Sbjct:    5 LVLIRHGQSEWNLKNLFTGWKDPGLTEKGRTEAIAAGKKLKETGLKFDIAYTSALQRAQKTAQNILEQMEQSDLELIKTPALNERNYGDLSGLNKDEVRQKWG-EQQVQIWRRSYTIAPPNGESLRDTGARVWPYYLHHIQPHILRSQTVLIAAHGNSLRAL 165          
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMA_SOLUE (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Solibacter usitatus (strain Ellin6076) GN=gpmA PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.888e-11
Identity = 40/103 (38.83%), Postives = 61/103 (59.22%), Query Frame = 1
Query:  145 EIIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKE-FKISVIYSSDLKRALETAQTIANRCGGLKVIEDP-----ELRERHLGDLQGLVFREAA 435
            +++++RHGE+ WN + +  G  DV+L++ GR+QA   AE L +E +   V Y+S LKRA+ T  T+ +   G+ ++  P      L ERH G LQGL   E A
Sbjct:    3 KLVLIRHGESTWNKENRFTGWTDVDLSDEGRQQATEAAEVLKREGYVFDVAYTSVLKRAIRTLWTVLD---GMDLMWIPVHRSWRLNERHYGALQGLNKAETA 102          
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMA_TREDE (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Treponema denticola GN=gpmA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.383e-11
Identity = 57/188 (30.32%), Postives = 82/188 (43.62%), Query Frame = 1
Query:  148 IIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKE-FKISVIYSSDLKRALETAQTIANRCG--GLKVIEDPELRERHLGDLQGL--------------------------VFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHI--GERIXVVTHGGVIRTL 618
            +++VRHGE+ WN      G  DV+L+E G E+A      L KE F   + Y+S LKRA+ T   I ++     L VI+  +L ERH G LQGL                          V  E  K CP   + +  G    ++P   ESL     R     ++  +  +  G+RI +  HG  +R L
Sbjct:    3 LVLVRHGESEWNKLNLFTGWTDVDLSEKGVEEAKEGGTYLKKEGFDFDICYTSYLKRAIHTLNYILSQMDREWLPVIKTWKLNERHYGGLQGLNKAETAEKYGEDQVKIWRRSFDIAPPVLEEGDKRCPYLQEQY-RGIEKSELP-LTESLKDTIARAVPFFEKTIKPQMLEGKRILITAHGNSLRAL 188          
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMA_RHISN (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Rhizobium sp. (strain NGR234) GN=gpmA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.383e-11
Identity = 53/165 (32.12%), Postives = 82/165 (49.70%), Query Frame = 1
Query:  148 IIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAK-EFKISVIYSSDLKRALETAQTIANRCG--GLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRR-----CTSALQRIARKHIGERIXVVTHGGVIRTL 618
            +++VRHG++ WN++    G  D +L E+G E+A +    LA+   K  + ++S L RA  T Q + +  G   L+ I D  L ER  GDL GL  ++ A+      Q  +  ++    P GGESL     R      T  L R+     GE++ V  HG  +R+L
Sbjct:    5 LVLVRHGQSEWNLKNLFTGWRDPDLTELGVEEAKAGGAALAEYGIKFDIAFTSVLVRAQRTCQMVLDAVGQSSLETICDQALNERDYGDLSGL-NKDDARAKWGEEQVHIWRRSYDVPPPGGESLRDTGARVWPYYLTEILPRVL---AGEKVLVAAHGNSLRSL 165          
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: TIGAR_XENLA (Probable fructose-2,6-bisphosphatase TIGAR OS=Xenopus laevis GN=tigar PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.337e-11
Identity = 49/133 (36.84%), Postives = 76/133 (57.14%), Query Frame = 1
Query:  148 IIVVRHGETPWNVQGKVQGQ-LDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANR---CGGLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRC 534
            + +VRHGET +N +  +QGQ +D  L+E+G +QA   A R     + + ++SSDL RA +TA  I         +K++ DP LRER  GD +G   R  +++  +A +A   G+     P GGE+L+Q+ R C
Sbjct:    6 LTIVRHGETRYNKEKLLQGQGIDEPLSEMGFKQA-DAAGRFLSNVRFTHVFSSDLIRAKQTACAIMRNNQLSEDIKIMYDPRLRERKYGDAEG---RPLSELKVMAKKA--GGQCPSYTPPGGETLEQV-RAC 131          
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMA_CHLTE (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Chlorobium tepidum GN=gpmA PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.337e-11
Identity = 38/101 (37.62%), Postives = 61/101 (60.40%), Query Frame = 1
Query:  145 EIIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKE-FKISVIYSSDLKRALETAQTIANRCG--GLKVIEDPELRERHLGDLQGLVFREAAK 438
            +++++RHGE+ WN + +  G +DV+L+E GRE+A +  + L  E F   + Y+S LKRA+ T  T+ +      + V ++  L ERH G LQGL   E A+
Sbjct:    3 KLVLLRHGESQWNRENRFTGWVDVDLSEKGREEARTAGQLLKDEGFVFDLAYTSVLKRAIRTLWTVLDEMNLMWIPVTKNWRLNERHYGALQGLNKAETAQ 103          
BLAST of EY728715 vs. ExPASy Swiss-Prot
Match: GPMA_AGRRK (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=gpmA PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.337e-11
Identity = 52/165 (31.52%), Postives = 83/165 (50.30%), Query Frame = 1
Query:  148 IIVVRHGETPWNVQGKVQGQLDVELNEVGREQAVSVAERLAK-EFKISVIYSSDLKRALETAQTIANRCG--GLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRR-----CTSALQRIARKHIGERIXVVTHGGVIRTL 618
            +++VRHG++ WN++    G  D +L  +G E+A +  + LA    K  + ++S L RA  T + I +  G  GL+ I+D  L ER  GDL GL  ++ A+      Q  +  ++    P GGESL     R      T  L R+     G+++ V  HG  +R+L
Sbjct:    5 LVLVRHGQSDWNLKNLFTGWKDPDLTALGVEEAKTGGKALADYGIKYDIAFTSVLTRAQHTLKIILDEVGQPGLETIKDQALNERDYGDLSGL-NKDDARAKWGEEQVHIWRRSYDVPPPGGESLRDTGARVWPYYLTEILPRVL---AGQKVLVAAHGNSLRSL 165          
The following BLAST results are available for this feature:
BLAST of EY728715 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
GPMA_CYAP73.742e-1128.082,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_BARHE3.742e-1129.632,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_SOLUE4.888e-1138.832,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_TREDE6.383e-1130.322,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_RHISN6.383e-1132.122,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
TIGAR_XENLA8.337e-1136.84Probable fructose-2,6-bisphosphatase TIGAR OS=Xeno... [more]
GPMA_CHLTE8.337e-1137.622,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMA_AGRRK8.337e-1131.522,3-bisphosphoglycerate-dependent phosphoglycerate... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-007-F05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728715 ID=EY728715; Name=EY728715; organism=Citrus sinensis; type=EST; length=813bp
CCACGCGTCCGAAAAATCCCAAAACATTTCTGCGCGGAATCGGAACGGAT
TCAGAGGCACTCAAAACCCGGGAACATGGCCGAGTCAACGGAGTCTCCAG
CAGTCATGAACGGCAGCTCTGCCTCTGTTGGGCCTGATTATTGTGAGATC
ATTGTGGTGCGTCACGGTGAAACGCCTTGGAACGTTCAAGGAAAAGTTCA
GGGGCAGTTAGATGTTGAATTGAATGAAGTTGGAAGAGAGCAAGCTGTTT
CTGTGGCTGAGCGGCTGGCTAAGGAATTTAAAATTTCTGTTATCTATTCT
TCTGACCTGAAGCGAGCACTCGAAACTGCACAGACAATTGCAAACAGATG
TGGTGGGCTAAAGGTCATTGAAGATCCTGAACTAAGGGAAAGACATCTTG
GAGATCTTCAAGGCCTTGTTTTCCGTGAAGCAGCCAAAGTCTGTCCTATA
GCATATCAAGCATTTTTATCTGGCAAGACAGATCAAGATATCCCTGGTGG
TGGAGAAAGTCTTGATCAACTTTATCGACGGTGCACGTCTGCATTGCAGA
GAATTGCTAGGAAGCATATAGGAGAGCGAATANTAGTTGTGACTCATGGT
GGTGTAATCAGAACACTCTACCAACGGGCTTGCCCAAACAAAAAGCCTGA
AGGTAAGGTCCTGAATACTCTATCAACATATTTAGGTTGACTGAAAAAAC
AAGTGGGTCTTAAAAACTGGGGTGATGTTAGTCATCTCACCCAACAGGAT
TCTAAAGTCTGGTTTTGGTGGGGACTCACTTCCTGGTTATTCTGGGGCGG
GGCTCTGATGTGG
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