EY728713

Overview
NameEY728713
Unique NameEY728713
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length899
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728713 vs. ExPASy Swiss-Prot
Match: THI4_PYRIL (Putative thiazole biosynthetic enzyme OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=Pisl_1998 PE=3 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.711e-23
Identity = 78/254 (30.71%), Postives = 125/254 (49.21%), Query Frame = 2
Query:    5 RPMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQ-DSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVXRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 757
            R + +  + D+  Y+D D    GAG AGL+ A  L++  + ++ + E+  S GGG    G +   +VV++ A   L +  I Y    D    +  A L        + A    K+   V  +D+I +G   RV G++  W  + M+    S +DP   +AK V+ + GHD    +    ++  +G+  EV G K+     +E  +V  T  V PG+ V GM V  + G PRMGP FG M++SG++AA +  K L
Sbjct:    7 RAIIKHGLEDLYEYSDVDVAIVGAGPAGLTAARYLAERGH-KVVVYERRFSFGGGIGPGGNMIPKIVVQEEAVPVLRDFKIRYKPVGDGLYTVDPAELIAKLAAGAIDA--GAKIILGVHVDDVIFRGDPPRVVGLLWVWTPIQMSG---SHVDPLYTQAKAVLDATGHDAEVISIAARKVPELGI--EVRGEKSAWAEVSEKLVVEHTGRVAPGLYVAGMAVCTVHGLPRMGPIFGGMLLSGRRAAEIIHKDL 252          
BLAST of EY728713 vs. ExPASy Swiss-Prot
Match: THI4_PYRCJ (Putative thiazole biosynthetic enzyme OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=Pcal_1555 PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.109e-22
Identity = 72/256 (28.12%), Postives = 123/256 (48.05%), Query Frame = 2
Query:    5 RPMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQ-DSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVXRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQ 763
            R + +  + D+  Y+D D    GAG AGL+ A  L++    ++ + E+  S GGG    G +   +VV++ A   L +  + +    D    +  A L        + A    K+   V  +D+I +G   RV G++  W  + M+      +DP   +AK V+ + GHD    +    ++  +G+  ++ G K+     +E  +V  T  V PG+ V G+ V  + G PRMGP FG M++SG+K A +  K L +
Sbjct:    7 RAIIKHGLEDLYEYSDVDVAIVGAGPAGLTAARYLAER-GFKVLVFERRFSFGGGIGPGGNMIPKIVVQEEALPILKDFKVRFKPAGDGLYTVDPAELIAKLAAGAIDA--GAKILLGVHVDDVIFRGDPPRVAGLLWIWTPIQMSG---MHVDPLYTQAKAVIDATGHDAEVVSVAARKVPELGL--QLQGEKSAWSEVSEKLVVEHTGRVAPGLYVAGIAVCAVYGLPRMGPIFGGMLMSGRKVAEVVAKDLAE 254          
BLAST of EY728713 vs. ExPASy Swiss-Prot
Match: THI4_PYRAE (Putative thiazole biosynthetic enzyme OS=Pyrobaculum aerophilum GN=PAE0175 PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.109e-22
Identity = 74/254 (29.13%), Postives = 123/254 (48.43%), Query Frame = 2
Query:    5 RPMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDE-QDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVXRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 757
            R +    + D+  Y+D D    GAG AGL+ A  L++   +++ + E+  S GGG    G +   +VV++ A   L +  + Y   +D    +  A L        + A    K+   V  +D+I +G   RV G++  W  + M+      +DP   +AK V+ + GHD    +    ++  +G+  +V G K+     +E  +V  T  V PG+ V G+ V  + G PRMGP FG M++SG+K A +  K L
Sbjct:    7 RAIISHALKDLDEYSDVDVAIVGAGPAGLTAARYLAEK-GLKVVVYERRFSFGGGIGPGGNMLPKIVVQEEAVPILRDFKVRYKPAEDGLYTVDPAELIAKLAAGAVDA--GAKIILGVHVDDVIFRGDPPRVTGLLWIWTPIQMSG---MHVDPLYTQAKAVIDATGHDAEVVSVAARKVPELGI--QVVGEKSAWSEVSEKLVVEHTGRVAPGLYVAGIAVCAVYGLPRMGPIFGGMLMSGKKVAEVVYKDL 252          
BLAST of EY728713 vs. ExPASy Swiss-Prot
Match: THI4_THENV (Putative thiazole biosynthetic enzyme OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=Tneu_1052 PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.227e-22
Identity = 74/254 (29.13%), Postives = 124/254 (48.82%), Query Frame = 2
Query:    5 RPMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQ-DSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVXRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 757
            R + +  + D+  Y++ D    GAG AGL+ A  L++  + ++ + E+  S GGG    G +   +VV++ A   L +  + Y    D    +  A L        + A    K+   V  +D+I +G   RV G++  W  + M+    S +DP   +A+ V+ + GHD    +    ++  +G+  EV G K+     +E  +V  T  V PG+   GM V  + G PRMGP FG M++SG++AA +  K L
Sbjct:    7 RAIIKHGLEDLYEYSEVDVAVVGAGPAGLTAARYLAERGH-RVVVYERRFSFGGGIGPGGNMIPKIVVQEEAVPVLKDFRVRYRPVGDGLYTVDPAELIAKLAAGAIDA--GAKIILGVHVDDVIFRGDPPRVAGLLWVWTPIQMSG---SHVDPLYTQARAVLDATGHDAEVISIASRKVPELGV--EVRGEKSAWAEVSEKLVVEHTGRVAPGLYAAGMAVCAVHGLPRMGPIFGGMLLSGRRAAEIIHKDL 252          
BLAST of EY728713 vs. ExPASy Swiss-Prot
Match: THI4_DESMR (Putative thiazole biosynthetic enzyme OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=DMR_31420 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.499e-19
Identity = 76/261 (29.12%), Postives = 132/261 (50.57%), Query Frame = 2
Query:    2 TRPMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDE-QDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG----RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVXR--LKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQK-AAHLALKSLG 760
            T+ +   Y     +  D D    G G +G++ A  L+ +    +A+ E+ +S GGG W  G  F+ +VV++ +   L ++G+     +D+Y      A  T+   +  LA    K+FN ++ ED++++      RV G+V N + V +       +DP V+ +K +V + GH      T V +  ++       + G +++  ++AE   V+ TRE+ PG+ V GM      G+ RMGP FG M++SG+K AA +A K  G
Sbjct:    9 TQAILETYFEKFKSSLDLDVAIVGGGPSGMTAARLLAAD-GFNVALFERKLSLGGGMWGGGMTFNMIVVQEESVHLLTDVGVPVKRYKDNYFTADAVAATTTLASAACLA--GAKIFNCMSVEDVMLREENGVKRVTGIVINSSPVEI---AGLHVDPVVLGSKYLVEATGHAVEVLQTLVRKNDVRLNTPSGGIEGEQSMWADTAEINTVKNTREIFPGLYVAGMAANASYGSYRMGPIFGGMLLSGEKVAADIAAKLKG 263          
The following BLAST results are available for this feature:
BLAST of EY728713 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
THI4_PYRIL1.711e-2330.71Putative thiazole biosynthetic enzyme OS=Pyrobacul... [more]
THI4_PYRCJ1.109e-2228.13Putative thiazole biosynthetic enzyme OS=Pyrobacul... [more]
THI4_PYRAE1.109e-2229.13Putative thiazole biosynthetic enzyme OS=Pyrobacul... [more]
THI4_THENV3.227e-2229.13Putative thiazole biosynthetic enzyme OS=Thermopro... [more]
THI4_DESMR1.499e-1929.12Putative thiazole biosynthetic enzyme OS=Desulfovi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-007-F03-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728713 ID=EY728713; Name=EY728713; organism=Citrus sinensis; type=EST; length=899bp
CACGCGTCCGATGACGCGCAGGTACATGACGGACATGATCACTTATGCTG
ACACTGATGTGGTAGTGGTTGGTGCTGGCTCTGCTGGCCTCTCTTGTGCT
TATGAGCTCAGCAAAAACCCCAACATTCAGATTGCTATTATCGAACAGTC
TGTTAGCCCCGGCGGTGGCGCGTGGCTCAGTGGACAGCTCTTCTCTGCCA
TGGTTGTGCGCAAACCAGCCCACATCTTCCTTGACGAGCTTGGCATCGAC
TACGATGAGCAAGACAGCTATGTTGTGATCAAGCATGCAGCGCTGTTCAC
CTCCACTATAATGAGCAAGCTCCTGGCCCGCCCCAACGTCAAGCTCTTTA
ATGCAGTGGCAGCCGAGGACTTGATAGTCAAAGGCGGCAGAGTTGGTGGT
GTGGTGACCAACTGGGCGTTGGTGTCAATGAATCACGATACACAGTCTTG
CATGGATCCCAATGTAATGGAAGCGAAGGTGGTTGTGAGCTCTTGTGGCC
ATGATGGGCCTTTTGGGGCCACTGGAGTANAGAGGTTGAAGAGTATCGGA
ATGATTGAGGAAGTGCCTGGAATGAAGGCACTGGACATGAACTCTGCAGA
AGATGCTATTGTGAGGCTGACCAGGGAGGTTGTGCCTGGTATGATAGTTA
CCGGCATGGAAGTTGCCGAGATTGATGGTGCTCCTAGAATGGGGCCNACA
TTTGGAGCAATGATGATATCGGGGCAGAAGGCTGCGCATTTGGCGTTGAA
GTCACTGGGCCAGCCGAATGCATAAACGGTACTATGTGGGAAGTGGTCAC
CTGAGCTGATCTTNCCTGCACTGGTTTCGGGAGAAACTGCTGATGGTTAT
TTGGATATAACAGGCTCATCCTCTTCACCTGTGTCATGCAAATAACCTG
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