EY728712

Overview
NameEY728712
Unique NameEY728712
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length861
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY728712 vs. ExPASy Swiss-Prot
Match: THI4_UROFA (Thiazole biosynthetic enzyme, mitochondrial OS=Uromyces fabae GN=THI2 PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 7.668e-26
Identity = 57/118 (48.31%), Postives = 83/118 (70.34%), Query Frame = 1 
Query:  157 KTNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSELLARPNVKLFSAVAVEDLI-------XXXXXXXXXXSNWALVVMSLDTQA 489
            + +++I I+E +V+PGGG WL GQL SAMV RKPA  FLD++G+ Y+++ ++VV+KHAALFTST++S++LA PNVK+F+A A EDLI                 +NW LV ++ D Q+
Sbjct:  103 RPDLKITILESNVAPGGGCWLGGQLMSAMVCRKPADEFLDQVGVPYEDEGNFVVVKHAALFTSTVLSKVLAMPNVKMFNATACEDLIIKPCPINPGVQRIAGCVTNWTLVSLNHDHQS 220
The following BLAST results are available for this feature:
BLAST of EY728712 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
THI4_UROFA7.668e-2648.31Thiazole biosynthetic enzyme, mitochondrial OS=Uro... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-007-F02-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728712 ID=EY728712; Name=EY728712; organism=Citrus sinensis; type=EST; length=861bp
GCGCACGTTGTCAGGTACCGGTGCGGAATTCCTAGGTCGGACCACGCGTC
CGATGACGCGCAGGTAGATGACGGACATGATCACTTATGCTGACACTGAT
GTGGTAGTGGTTGGTGCTGGCTCTGCTGGCCTCTCTTGTGCTTATGAGCT
CAGCAAAAAACCAACATTCAGATTGCTATTATCGAACAGTCTGTTAGCCC
CGGCGGTGGCGCGTGGCTCAGTGGACAGCTCTTCTCTGCCATGGTTGTGC
GCAAACCAGCCCACATCTTCCTTGACGAGCTTGGCATCGACTACGATGAG
CAAGACAGCTATGTTGTGATCAAGCATGCAGCGCTGTTCACCTCCACTAT
AATGAGCGAGCTCCTGGCCCGGCCCAACGTCAAGCTCTTTAGTGCAGTGG
CAGTCGAGGACTTGATAGTCAGAGGCGGCAGAGTTGGTGGTGTGGTGAGC
AACTGGGCGTTGGTGGTCATGAGTCTCGATACACAGGCTGGCGTGGATGC
CAATGTAGTGGAGGCCAAGGTGGTGGTGAGCGCTGGGGGGCTGATGGGGC
TGTTGGGGCCGCGGACTGATGACGTGGGGGAGGTTGGGGTGAGGGGGGGG
GTGCGGGGGAGGATGGCTGGGGTTGTGGTGTGCCAAAAGCCGCTTTGGTG
GCGACGCGCGAGTGGAGCGGGGGAGCGGTAGGGGTGTGAGGGTGCTGCGC
TCGGGGTGGCTACATGGGAGTCGCCGGGTGGTGAGCGCATCGGGTGTCTG
TTCGTAGGGTGGGCTGGCCGGGTGGTCGGTGGATGCTTGGGGTGGTGGGC
GGCGGATGGGCTGGTGGGCCCGGCATGGCGGCGCGTGGGCGGGGGCGGAG
GGGATATGCGC
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