EY728705

Overview
NameEY728705
Unique NameEY728705
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY728705_ssr861 microsatellite EY728705_ssr861:861..872. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY728705 vs. ExPASy Swiss-Prot
Match: EF1G_CARAU (Elongation factor 1-gamma OS=Carassius auratus GN=eef1g PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.186e-17
Identity = 47/137 (34.31%), Postives = 70/137 (51.09%), Query Frame = 2
Query:   44 LLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILTKSFTSEFPHVERYFWTMVNIPNFRKILGEIKQAESVPPVQSAK 454
            L GS+   SA + QW+ F+  EI      W  P +G   +  QA E             N HL + T+LVG  V+LADI + C+L   + ++L  +F   +P+V R+F T VN P F+ +LGE+K  E +    + K
Sbjct:   84 LRGSTPQASAQVLQWVSFADSEIIPPASAWVFPTLGIMQFNKQATEQAKEEVKRVLAVLNQHLNTRTFLVGERVSLADITVVCSLLWLYKQVLEPAFRQPYPNVTRWFLTCVNQPQFKAVLGEVKLCEKMAQFDAKK 220          
BLAST of EY728705 vs. ExPASy Swiss-Prot
Match: EF1G_RABIT (Elongation factor 1-gamma OS=Oryctolagus cuniculus GN=EEF1G PE=2 SV=3)

HSP 1 Score: 87.8113 bits (216), Expect = 8.845e-17
Identity = 46/137 (33.58%), Postives = 68/137 (49.64%), Query Frame = 2
Query:   44 LLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILTKSFTSEFPHVERYFWTMVNIPNFRKILGEIKQAESVPPVQSAK 454
            L GS+   +A + QW+ F+  +I      W  P +G   +  QA E             + HL + T+LVG  VTLADI + C L   + ++L  SF   FP+  R+F T +N P FR +LGE+K  E +    + K
Sbjct:   84 LRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGIMHHNKQATENAKEEVKRILGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSFRQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKK 220          
BLAST of EY728705 vs. ExPASy Swiss-Prot
Match: EF1G_MACFA (Elongation factor 1-gamma OS=Macaca fascicularis GN=EEF1G PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.845e-17
Identity = 46/137 (33.58%), Postives = 68/137 (49.64%), Query Frame = 2
Query:   44 LLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILTKSFTSEFPHVERYFWTMVNIPNFRKILGEIKQAESVPPVQSAK 454
            L GS+   +A + QW+ F+  +I      W  P +G   +  QA E             + HL + T+LVG  VTLADI + C L   + ++L  SF   FP+  R+F T +N P FR +LGE+K  E +    + K
Sbjct:   84 LRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGIMHHNKQATENAKEEVRRILGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSFRQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKK 220          
BLAST of EY728705 vs. ExPASy Swiss-Prot
Match: EF1G_HORSE (Elongation factor 1-gamma OS=Equus caballus GN=EEF1G PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.845e-17
Identity = 46/137 (33.58%), Postives = 68/137 (49.64%), Query Frame = 2
Query:   44 LLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILTKSFTSEFPHVERYFWTMVNIPNFRKILGEIKQAESVPPVQSAK 454
            L GS+   +A + QW+ F+  +I      W  P +G   +  QA E             + HL + T+LVG  VTLADI + C L   + ++L  SF   FP+  R+F T +N P FR +LGE+K  E +    + K
Sbjct:   84 LRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGIMHHNKQATENAKEEVRRILGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSFRQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKK 220          
BLAST of EY728705 vs. ExPASy Swiss-Prot
Match: EF1G_BOVIN (Elongation factor 1-gamma OS=Bos taurus GN=EEF1G PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.845e-17
Identity = 46/137 (33.58%), Postives = 68/137 (49.64%), Query Frame = 2
Query:   44 LLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILTKSFTSEFPHVERYFWTMVNIPNFRKILGEIKQAESVPPVQSAK 454
            L GS+   +A + QW+ F+  +I      W  P +G   +  QA E             + HL + T+LVG  VTLADI + C L   + ++L  SF   FP+  R+F T +N P FR +LGE+K  E +    + K
Sbjct:   84 LRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGIMHHNKQATENAKEEVRRILGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSFRQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKK 220          
BLAST of EY728705 vs. ExPASy Swiss-Prot
Match: EF1G_DANRE (Elongation factor 1-gamma OS=Danio rerio GN=eef1g PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.155e-16
Identity = 45/137 (32.85%), Postives = 70/137 (51.09%), Query Frame = 2
Query:   44 LLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILTKSFTSEFPHVERYFWTMVNIPNFRKILGEIKQAESVPPVQSAK 454
            L GS+   SA + QW+ F+  E+      W  P +G   +  QA E             N HL + T+LVG  ++LADI + C+L   + ++L  +F   +P+V R+F T VN P F+ +LGE+K  E +    + K
Sbjct:   84 LRGSTPQASAQVLQWVSFADSEVIPPASAWVFPTLGIMQFNKQATEQAKEEVKRVLAVLNQHLNTRTFLVGERISLADITVVCSLLWLYKQVLEPAFRQPYPNVTRWFVTCVNQPQFKTVLGEVKLCEKMAQFDAKK 220          
BLAST of EY728705 vs. ExPASy Swiss-Prot
Match: EF1G_HUMAN (Elongation factor 1-gamma OS=Homo sapiens GN=EEF1G PE=1 SV=3)

HSP 1 Score: 85.5001 bits (210), Expect = 4.390e-16
Identity = 45/137 (32.85%), Postives = 68/137 (49.64%), Query Frame = 2
Query:   44 LLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILTKSFTSEFPHVERYFWTMVNIPNFRKILGEIKQAESVPPVQSAK 454
            L GS+   +A + QW+ F+  +I      W  P +G   +  QA E             + +L + T+LVG  VTLADI + C L   + ++L  SF   FP+  R+F T +N P FR +LGE+K  E +    + K
Sbjct:   84 LRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGIMHHNKQATENAKEEVRRILGLLDAYLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSFRQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKK 220          
BLAST of EY728705 vs. ExPASy Swiss-Prot
Match: EF1GB_XENLA (Elongation factor 1-gamma-B OS=Xenopus laevis GN=eef1g-B PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.179e-15
Identity = 42/131 (32.06%), Postives = 65/131 (49.62%), Query Frame = 2
Query:   62 IDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILTKSFTSEFPHVERYFWTMVNIPNFRKILGEIKQAESVPPVQSAK 454
            +  A + QW+ FS   +      W  P +G   +  QA E             + HL + T+LVG  +TLADI +TC+L   + ++L  SF   + +V R+F T VN P FR +LGE+K  + +    + K
Sbjct:   91 LHQAQVIQWVGFSDSHVVPPASAWVFPTLGIMQFNKQATEQAKEEIKTVLGVLDCHLQTRTFLVGERITLADITLTCSLLWLYKQVLEPSFRQPYGNVTRWFVTCVNQPEFRAVLGEVKLCDKMAQFDAKK 221          
BLAST of EY728705 vs. ExPASy Swiss-Prot
Match: EF1G_ARTSA (Elongation factor 1-gamma OS=Artemia salina PE=1 SV=3)

HSP 1 Score: 77.7962 bits (190), Expect = 9.154e-14
Identity = 40/128 (31.25%), Postives = 64/128 (50.00%), Query Frame = 2
Query:   44 LLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILTKSFTSEFPHVERYFWTMVNIPNFRKILGEIKQAE 427
            L GSS ++ A I QW+ F+  EI      W  P +G   +  QA               + HL + TYLVG  +TLADI++TC L   +  +L ++F   + +  R+F T++N    + ++G+ K  E
Sbjct:   81 LRGSSDLEKAQIIQWMTFADTEILPASCTWVFPVLGIMQFNKQATARAKEDIDKALQALDDHLLTRTYLVGERITLADIVVTCTLLHLYQHVLDEAFRKSYVNTNRWFITLINQKQVKAVIGDFKLCE 208          
The following BLAST results are available for this feature:
BLAST of EY728705 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
EF1G_CARAU5.186e-1734.31Elongation factor 1-gamma OS=Carassius auratus GN=... [more]
EF1G_RABIT8.845e-1733.58Elongation factor 1-gamma OS=Oryctolagus cuniculus... [more]
EF1G_MACFA8.845e-1733.58Elongation factor 1-gamma OS=Macaca fascicularis G... [more]
EF1G_HORSE8.845e-1733.58Elongation factor 1-gamma OS=Equus caballus GN=EEF... [more]
EF1G_BOVIN8.845e-1733.58Elongation factor 1-gamma OS=Bos taurus GN=EEF1G P... [more]
EF1G_DANRE1.155e-1632.85Elongation factor 1-gamma OS=Danio rerio GN=eef1g ... [more]
EF1G_HUMAN4.390e-1632.85Elongation factor 1-gamma OS=Homo sapiens GN=EEF1G... [more]
EF1GB_XENLA2.179e-1532.06Elongation factor 1-gamma-B OS=Xenopus laevis GN=e... [more]
EF1G_ARTSA9.154e-1431.25Elongation factor 1-gamma OS=Artemia salina PE=1 S... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-007-E05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728705 ID=EY728705; Name=EY728705; organism=Citrus sinensis; type=EST; length=885bp
CACGCGTCCGACGATATGTTGCACGCTTGAAAGCTGACACCCACTGTTGG
GCTCGTCTTTAATTGATTCTGCTCATATTGAGCAGTGGATTGATTTCTCA
TCATTAGAAATTGACACCAATATTTTGCGTTGGTTTATACCAAGAGTTGG
TTTCGCGGTGTACCTTCCTCAGGCTGAGGAAGCTGCAATTGCTTCTTTGA
AGAGAGCTCTAGCTGCATTGAATACACATCTCGCTTCCAACACTTACTTA
GTTGGCCATTCAGTGACTTTGGCTGATATCATTATGACATGTAACTTGAC
GTTGGGATTCAGTCGGATCCTGACCAAGAGCTTTACATCAGAATTCCCTC
ACGTTGAGAGATACTTTTGGACAATGGTTAACATACCAAATTTCCGCAAG
ATATTGGGAGAGATAAAGCAAGCAGAATCTGTCCCTCCTGTTCAGTCAGC
GAAGAAGCCCACGCAGTCAAAAGAGCCTGCAAAACCCAAGGCCCAGGCTG
AGCCAAAGAAAGAGGCTGCAAAAGAAACAGCAAAACCTAAAGTTGAACAA
AGTGGGCGGATTCCTGCAGCGAATGGACTTGGCTCGTAAGTATGCTTTTG
GGAAGATGCTGGTTATTGGCTCGGAGCCACCTTTCAGGTAAAGGGTTTGT
GGCTTTTCCGTGGACAAGTGATTCCCTCATTTATAATGTACGAGTGTTAC
GACATGGAGTTGTATGATTGGAAGAAGGTGGACATCAATGATGAAGCTCA
NAAAGAGCGTGTAAGCCAGATGATCGAAGATCATGAACCCTTCGANGGTG
AGGCCTGTNAGATGCCAGTGCTTCAGTGAGATCACCAAATGGACCAACCG
GGGAATACTGGTGTGTGTGTGTATGCTGTTGCACC
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