EY728692
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728692 vs. ExPASy Swiss-Prot
Match: FLIF_BRUAB (Flagellar M-ring protein OS=Brucella abortus GN=fliF PE=3 SV=3) HSP 1 Score: 109.383 bits (272), Expect = 3.033e-23 Identity = 70/186 (37.63%), Postives = 101/186 (54.30%), Query Frame = -1 Query: 1 MVGLAASVAIGFAVVLWSQQPDYRPLYGSLAGMDSKQIMETLAAADIAYTVEPNSGALLVKADDVARARMKLAAAGVTPSDANIGFEILDKDQGLGTSQFMEATRYRRGLEGELARTISALNNVKGARVHLAIPKSSVFVRDERKPSASVLVELFAGRSLEPGQVLAIINLVATSVPELSKSQITV 558 +VG A AI + + + +P Y LY L+ D ++ L A I + V+ + ++LV ARM LA G+ P+ N G+E+ D LG + FM+ R LEGE+ARTI A+ VK ARVH+ + + F R ++KPSASV++ G S E Q +I LVA +VP L S +TV Sbjct: 34 LVGAALMGAILYTSI-YLGRPSYETLYVGLSRDDVNRMGLALGEAGIPFDVKSDGSSILVPIGKAENARMYLAEKGL-PTSNNAGYELFDNMGSLGLTSFMQEITRVRALEGEIARTIQAIRGVKAARVHIVLAEKGSFRRGDQKPSASVVIRAEGGFSAESAQ--SIRQLVAAAVPSLDASSVTV 215
BLAST of EY728692 vs. ExPASy Swiss-Prot
Match: FLIF_CAUCR (Flagellar M-ring protein OS=Caulobacter crescentus GN=fliF PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.962e-23 Identity = 64/187 (34.22%), Postives = 104/187 (55.61%), Query Frame = -1 Query: 1 MVGLAASV-AIGFAVVLWSQQPDYRPLYGSLAGMDSKQIMETLAAADIAYTVEPNSGALLVKADDVARARMKLAAAGVTPSDANIGFEILDKDQGLGTSQFMEATRYRRGLEGELARTISALNNVKGARVHLAIPKSSVFVRDERKPSASVLVELFAGRSLEPGQVLAIINLVATSVPELSKSQITV 558 M+G+ A V A+ A+V++ + LY +L ++ ++ + L A I Y + + ++V D VA AR+ +A G+ S +IG+EI D + LG + F++ +R L+GEL RTI A+ V RVHL +PK +F D +PSA+V + + R V AI NLV++SVP + ++ V Sbjct: 1 MLGVGAGVVAVLVALVMFMGKEPSELLYSNLDLKEASEVTQALDQAGIKYETKGDGSTIMVPRDKVASARLMVAGKGLV-SSGSIGYEIFDTNNALGQTDFVQQLNRQRALQGELERTIKAMQGVNSVRVHLVLPKRQLFEEDAEQPSAAVTIGV-GSREPSSDMVRAIQNLVSSSVPNMKAEKVAV 185
BLAST of EY728692 vs. ExPASy Swiss-Prot
Match: FLIF_RHIME (Flagellar M-ring protein OS=Rhizobium meliloti GN=fliF PE=3 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 6.758e-23 Identity = 66/189 (34.92%), Postives = 105/189 (55.56%), Query Frame = -1 Query: 1 LMVGLAASVAIGFAVV--LWSQQPDYRPLYGSLAGMDSKQIMETLAAADIAYTVEPNSGALLVKADDVARARMKLAAAGVTPSDANIGFEILDKDQGLGTSQFMEATRYRRGLEGELARTISALNNVKGARVHLAIPKSSVFVRDERKPSASVLVELFAGRSLEPGQVLAIINLVATSVPELSKSQITV 561 + + +A VAIGF + ++ +P + LY L D QI LA A++ + V + G++ V +AR+ LA G+ PS AN G+E+ D LG + FM+ R LEGE+ARTI ++ + ARVH+ +P+ F + E+ P+ASV++ A ++ +I +LVA+SVP L +TV Sbjct: 23 IALAVAGVVAIGFVLGAGIYVNRPSFETLYVGLERSDVTQISIALAEANVDFEVGTDGGSIQVPVGMTGKARLLLAERGL-PSSANAGYELFDNVGSLGLTSFMQEVTRVRALEGEIARTIQQISGIAAARVHIVMPERGSFRKAEQTPTASVMIR--ASATVGRSAASSIRHLVASSVPGLDVDDVTV 208
BLAST of EY728692 vs. ExPASy Swiss-Prot
Match: FLIF_BACSU (Flagellar M-ring protein OS=Bacillus subtilis GN=fliF PE=3 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 3.040e-15 Identity = 51/202 (25.25%), Postives = 105/202 (51.98%), Query Frame = -1 Query: 1 WKPSPEMTMLRQVGLMVGLAASVAIGFAVVLWSQQPDYRPLYGSLAGMDSKQIMETLAAADIAYTVEPNSGALLVKADDVARARMKLAAAGVTPSDANIGFEILDKDQGLGTSQFMEATRYRRGLEGELARTISALNNVKGARVHLAIPKSSVFVRDERK-PSASVLVELFAGRSLEPGQVLAIINLVATSVPELSKSQITV 603 WK + L+++ ++ LAA + IG + +++ PLY L+ ++ QI E L A + + + V D V ++++AA G+ P +I + ++ G G + + + EL+ I+ ++ +K ++V + +PK +VFV +E+ SAS+++++ G +L+ Q+ + +LV+ SVP L + I + Sbjct: 16 WK---NRSKLQKILMVSALAAIIIIGIIISVFASNSKMAPLYKDLSAEEAGQIKEELDAKKVPNELSNGGTVISVPEDQVDSLKVQMAAEGL-PKTGSIDYSFFGQNAGFGLTDNEFDMVKVKATQTELSNLINEMDGIKNSKVMINLPKDAVFVGEEQSAASASIVLQIQPGYTLDQSQINGLYHLVSKSVPNLKEDNIVI 213
BLAST of EY728692 vs. ExPASy Swiss-Prot
Match: FLIE_PSEFS (Flagellar hook-basal body complex protein fliE OS=Pseudomonas fluorescens (strain SBW25) GN=fliE PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.663e-11 Identity = 39/67 (58.21%), Postives = 46/67 (68.66%), Query Frame = -1 Query: 694 VGRALTN-SGIPNSLQSVPTAFEMAKSGVTFTD*CSPRKKPSVSFQALTQVRNKLVQAYQDIMQMPV 891 +G+A+ S + + AFE+ KSGV TD +K SVSFQALTQVRNKLVQAYQDIMQMPV Sbjct: 43 LGQAINKVSDTQQASSQLANAFEIGKSGVDLTDVMVASQKASVSFQALTQVRNKLVQAYQDIMQMPV 109
BLAST of EY728692 vs. ExPASy Swiss-Prot
Match: FLIE_PSEF5 (Flagellar hook-basal body complex protein fliE OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=fliE PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.479e-11 Identity = 36/48 (75.00%), Postives = 39/48 (81.25%), Query Frame = -1 Query: 694 TAFEMAKSGVTFTD*CSPRKKPSVSFQALTQVRNKLVQAYQDIMQMPV 837 +AFE+ KSGV TD +K SVSFQALTQVRNKLVQAYQDIMQMPV Sbjct: 61 SAFEIGKSGVDLTDVMISSQKASVSFQALTQVRNKLVQAYQDIMQMPV 108
BLAST of EY728692 vs. ExPASy Swiss-Prot
Match: FLIE_PSEPF (Flagellar hook-basal body complex protein fliE OS=Pseudomonas fluorescens (strain Pf0-1) GN=fliE PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.543e-11 Identity = 36/47 (76.60%), Postives = 38/47 (80.85%), Query Frame = -1 Query: 694 AFEMAKSGVTFTD*CSPRKKPSVSFQALTQVRNKLVQAYQDIMQMPV 834 AFE+ KSGV TD +K SVSFQALTQVRNKLVQAYQDIMQMPV Sbjct: 63 AFEIGKSGVDLTDVMIASQKASVSFQALTQVRNKLVQAYQDIMQMPV 109
BLAST of EY728692 vs. ExPASy Swiss-Prot
Match: FLIE_PSEFL (Flagellar hook-basal body complex protein fliE OS=Pseudomonas fluorescens GN=fliE PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.543e-11 Identity = 36/47 (76.60%), Postives = 38/47 (80.85%), Query Frame = -1 Query: 694 AFEMAKSGVTFTD*CSPRKKPSVSFQALTQVRNKLVQAYQDIMQMPV 834 AFE+ KSGV TD +K SVSFQALTQVRNKLVQAYQDIMQMPV Sbjct: 63 AFEIGKSGVDLTDVMIASQKASVSFQALTQVRNKLVQAYQDIMQMPV 109
BLAST of EY728692 vs. ExPASy Swiss-Prot
Match: FLIE_PSEE4 (Flagellar hook-basal body complex protein fliE OS=Pseudomonas entomophila (strain L48) GN=fliE PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.543e-11 Identity = 36/47 (76.60%), Postives = 38/47 (80.85%), Query Frame = -1 Query: 694 AFEMAKSGVTFTD*CSPRKKPSVSFQALTQVRNKLVQAYQDIMQMPV 834 AFE+ KSGV TD +K SVSFQALTQVRNKLVQAYQDIMQMPV Sbjct: 64 AFEIGKSGVDLTDVMIASQKASVSFQALTQVRNKLVQAYQDIMQMPV 110
BLAST of EY728692 vs. ExPASy Swiss-Prot
Match: FLIE_PSE14 (Flagellar hook-basal body complex protein fliE OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=fliE PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.543e-11 Identity = 36/47 (76.60%), Postives = 38/47 (80.85%), Query Frame = -1 Query: 694 AFEMAKSGVTFTD*CSPRKKPSVSFQALTQVRNKLVQAYQDIMQMPV 834 AFE+ KSGV TD +K SVSFQALTQVRNKLVQAYQDIMQMPV Sbjct: 63 AFEIGKSGVDLTDVMISSQKASVSFQALTQVRNKLVQAYQDIMQMPV 109 The following BLAST results are available for this feature:
BLAST of EY728692 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >EY728692 ID=EY728692; Name=EY728692; organism=Citrus sinensis; type=EST; length=924bpback to top |