EY728681

Overview
NameEY728681
Unique NameEY728681
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length869
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728681 vs. ExPASy Swiss-Prot
Match: ALLB_SOLUE (Allantoinase OS=Solibacter usitatus (strain Ellin6076) GN=allB PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.024e-24
Identity = 60/171 (35.09%), Postives = 90/171 (52.63%), Query Frame = 2
Query:   56 YLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGR-KYGVTLEQLASWWSERPAK 565
            YL +RP   E  AI     +A++        G  LHIVH           +EA+T G  I +ETC HYL F+ +++       KCAPP+RD    ++LW  ++ G +D+++SDHSP  P +K  D+  F   WGGI+ +Q  L V    G  + G+ LE++A   +  PA+
Sbjct:  206 YLDSRPVIAEVEAIHRAALLAREA-------GCKLHIVHISSGRGVAAA-LEARTMGTDIAIETCAHYLFFTEDDLLRLGAIAKCAPPLRDRQEFDRLWAHVLGGIVDVVASDHSPAPPAMKTGDD--FFAIWGGIAGVQSTLAVLLEAGHFQRGLRLERIAELTAGYPAR 366          

HSP 2 Score: 34.2686 bits (77), Expect = 2.024e-24
Identity = 16/44 (36.36%), Postives = 25/44 (56.82%), Query Frame = 1
Query:  580 SKGAIAIGNHADLVVWELKRSLN*QXTSCTLEHPASPLLGKKSR 711
            +KG+IA+GN ADL + ++    N +  S   +HP +P  G   R
Sbjct:  372 NKGSIAVGNDADLTLVDMDGQENLEPESLWQKHPVNPYTGNSFR 415          
BLAST of EY728681 vs. ExPASy Swiss-Prot
Match: ALLB_BACLD (Allantoinase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=allB PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 9.828e-24
Identity = 63/175 (36.00%), Postives = 93/175 (53.14%), Query Frame = 2
Query:   44 SYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYG-RKYGVTLEQLASWWSERPAK 565
            S   Y+ +RP   E   IR+++  AK+T       G  +HIVH           ++A+  G  IT ETC HYL F  EE+       KC+PPIR+ +  E +W  +++G I  ++SDHSP  P+LK  D  N  +AWGGI+ LQ  + V +  G +K  + L + A+  +  PAK
Sbjct:  211 SLRAYVDSRPVFTEVEPIRKIILFAKET-------GCRVHIVHIACEEGVDEI-VKAQQEGVDITCETCTHYLYFYKEELDHIGPVVKCSPPIREQSRLEGMWNRVLNGDISFVTSDHSPCTPDLKATD--NAFEAWGGIAGLQNNVDVLFDEGVQKRNMPLSKFAAIIATNPAK 375          

HSP 2 Score: 28.4906 bits (62), Expect = 9.828e-24
Identity = 14/43 (32.56%), Postives = 21/43 (48.84%), Query Frame = 1
Query:  577 SSKGAIAIGNHADLVVWELKRSLN*QXTSCTLEHPASPLLGKK 705
            +SKG+IA+G  AD V  +       +       H  SP +G+K
Sbjct:  380 ASKGSIAVGKDADFVFIKKDAPYELKAEDLAYRHKISPYIGRK 422          
BLAST of EY728681 vs. ExPASy Swiss-Prot
Match: ALLB_ECOUT (Allantoinase OS=Escherichia coli (strain UTI89 / UPEC) GN=allB PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.759e-23
Identity = 63/178 (35.39%), Postives = 90/178 (50.56%), Query Frame = 2
Query:   56 YLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYG-RKYGVTLEQLASWWSERPAKLAGQVQR 586
            Y+ +RP   E  AIR +L +AK         G  LH+ H             A+  G  +T E+CPHY     ++  +  T  KC+PPIRD  N++ +WE L +G ID L SDHSP  PE+K    GN +KAWGGI+ LQ  + V +    +K G++L       +   A + G  Q+
Sbjct:  211 YVASRPVFTEVEAIRRVLYLAK-------VAGCRLHVCHVSSPEGVEEVT-RARQEGQDVTCESCPHYFVLDTDQFEEIGTLAKCSPPIRDLENQKGMWEKLFNGEIDCLVSDHSPCPPEMK---AGNIMKAWGGIAGLQSCMDVMFDEAVQKRGMSLPMFGKLMATNAADIFGLQQK 377          
BLAST of EY728681 vs. ExPASy Swiss-Prot
Match: ALLB_ECOSM (Allantoinase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=allB PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.759e-23
Identity = 63/178 (35.39%), Postives = 90/178 (50.56%), Query Frame = 2
Query:   56 YLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYG-RKYGVTLEQLASWWSERPAKLAGQVQR 586
            Y+ +RP   E  AIR +L +AK         G  LH+ H             A+  G  +T E+CPHY     ++  +  T  KC+PPIRD  N++ +WE L +G ID L SDHSP  PE+K    GN +KAWGGI+ LQ  + V +    +K G++L       +   A + G  Q+
Sbjct:  211 YVASRPVFTEVEAIRRVLYLAK-------VAGCRLHVCHISSPEGVEEVT-RARQEGQDVTCESCPHYFVLDTDQFEEIGTLAKCSPPIRDLENQKGMWEKLFNGEIDCLVSDHSPCPPEMK---AGNIMKAWGGIAGLQSCMDVMFDEAVQKRGMSLPMFGKLMATNAADIFGLQQK 377          
BLAST of EY728681 vs. ExPASy Swiss-Prot
Match: ALLB_ECOLI (Allantoinase OS=Escherichia coli (strain K12) GN=allB PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.759e-23
Identity = 63/178 (35.39%), Postives = 90/178 (50.56%), Query Frame = 2
Query:   56 YLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYG-RKYGVTLEQLASWWSERPAKLAGQVQR 586
            Y+ +RP   E  AIR +L +AK         G  LH+ H             A+  G  +T E+CPHY     ++  +  T  KC+PPIRD  N++ +WE L +G ID L SDHSP  PE+K    GN +KAWGGI+ LQ  + V +    +K G++L       +   A + G  Q+
Sbjct:  211 YVASRPVFTEVEAIRRVLYLAK-------VAGCRLHVCHVSSPEGVEEVT-RARQEGQDVTCESCPHYFVLDTDQFEEIGTLAKCSPPIRDLENQKGMWEKLFNGEIDCLVSDHSPCPPEMK---AGNIMKAWGGIAGLQSCMDVMFDEAVQKRGMSLPMFGKLMATNAADIFGLQQK 377          
BLAST of EY728681 vs. ExPASy Swiss-Prot
Match: ALLB_ECOL6 (Allantoinase OS=Escherichia coli O6 GN=allB PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.759e-23
Identity = 63/178 (35.39%), Postives = 90/178 (50.56%), Query Frame = 2
Query:   56 YLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYG-RKYGVTLEQLASWWSERPAKLAGQVQR 586
            Y+ +RP   E  AIR +L +AK         G  LH+ H             A+  G  +T E+CPHY     ++  +  T  KC+PPIRD  N++ +WE L +G ID L SDHSP  PE+K    GN +KAWGGI+ LQ  + V +    +K G++L       +   A + G  Q+
Sbjct:  211 YVASRPVFTEVEAIRRVLYLAK-------VAGCRLHVCHVSSPEGVEEVT-RARQEGQDVTCESCPHYFVLDTDQFEEIGTLAKCSPPIRDLENQKGMWEKLFNGEIDCLVSDHSPCPPEMK---AGNIMKAWGGIAGLQSCMDVMFDEAVQKRGMSLPMFGKLMATNAADIFGLQQK 377          
BLAST of EY728681 vs. ExPASy Swiss-Prot
Match: ALLB_ECOL5 (Allantoinase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=allB PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.759e-23
Identity = 63/178 (35.39%), Postives = 90/178 (50.56%), Query Frame = 2
Query:   56 YLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYG-RKYGVTLEQLASWWSERPAKLAGQVQR 586
            Y+ +RP   E  AIR +L +AK         G  LH+ H             A+  G  +T E+CPHY     ++  +  T  KC+PPIRD  N++ +WE L +G ID L SDHSP  PE+K    GN +KAWGGI+ LQ  + V +    +K G++L       +   A + G  Q+
Sbjct:  211 YVASRPVFTEVEAIRRVLYLAK-------VAGCRLHVCHVSSPEGVEEVT-RARQEGQDVTCESCPHYFVLDTDQFEEIGTLAKCSPPIRDLENQKGMWEKLFNGEIDCLVSDHSPCPPEMK---AGNIMKAWGGIAGLQSCMDVMFDEAVQKRGMSLPMFGKLMATNAADIFGLQQK 377          
BLAST of EY728681 vs. ExPASy Swiss-Prot
Match: ALLB_ECOK1 (Allantoinase OS=Escherichia coli O1:K1 / APEC GN=allB PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.759e-23
Identity = 63/178 (35.39%), Postives = 90/178 (50.56%), Query Frame = 2
Query:   56 YLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYG-RKYGVTLEQLASWWSERPAKLAGQVQR 586
            Y+ +RP   E  AIR +L +AK         G  LH+ H             A+  G  +T E+CPHY     ++  +  T  KC+PPIRD  N++ +WE L +G ID L SDHSP  PE+K    GN +KAWGGI+ LQ  + V +    +K G++L       +   A + G  Q+
Sbjct:  211 YVASRPVFTEVEAIRRVLYLAK-------VAGCRLHVCHVSSPEGVEEVT-RARQEGQDVTCESCPHYFVLDTDQFEEIGTLAKCSPPIRDLENQKGMWEKLFNGEIDCLVSDHSPCPPEMK---AGNIMKAWGGIAGLQSCMDVMFDEAVQKRGMSLPMFGKLMATNAADIFGLQQK 377          
BLAST of EY728681 vs. ExPASy Swiss-Prot
Match: ALLB_ECODH (Allantoinase OS=Escherichia coli (strain K12 / DH10B) GN=allB PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.759e-23
Identity = 63/178 (35.39%), Postives = 90/178 (50.56%), Query Frame = 2
Query:   56 YLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYG-RKYGVTLEQLASWWSERPAKLAGQVQR 586
            Y+ +RP   E  AIR +L +AK         G  LH+ H             A+  G  +T E+CPHY     ++  +  T  KC+PPIRD  N++ +WE L +G ID L SDHSP  PE+K    GN +KAWGGI+ LQ  + V +    +K G++L       +   A + G  Q+
Sbjct:  211 YVASRPVFTEVEAIRRVLYLAK-------VAGCRLHVCHVSSPEGVEEVT-RARQEGQDVTCESCPHYFVLDTDQFEEIGTLAKCSPPIRDLENQKGMWEKLFNGEIDCLVSDHSPCPPEMK---AGNIMKAWGGIAGLQSCMDVMFDEAVQKRGMSLPMFGKLMATNAADIFGLQQK 377          
BLAST of EY728681 vs. ExPASy Swiss-Prot
Match: ALLB_ECOBW (Allantoinase OS=Escherichia coli (strain K12 / BW2952) GN=allB PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.759e-23
Identity = 63/178 (35.39%), Postives = 90/178 (50.56%), Query Frame = 2
Query:   56 YLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYG-RKYGVTLEQLASWWSERPAKLAGQVQR 586
            Y+ +RP   E  AIR +L +AK         G  LH+ H             A+  G  +T E+CPHY     ++  +  T  KC+PPIRD  N++ +WE L +G ID L SDHSP  PE+K    GN +KAWGGI+ LQ  + V +    +K G++L       +   A + G  Q+
Sbjct:  211 YVASRPVFTEVEAIRRVLYLAK-------VAGCRLHVCHVSSPEGVEEVT-RARQEGQDVTCESCPHYFVLDTDQFEEIGTLAKCSPPIRDLENQKGMWEKLFNGEIDCLVSDHSPCPPEMK---AGNIMKAWGGIAGLQSCMDVMFDEAVQKRGMSLPMFGKLMATNAADIFGLQQK 377          
The following BLAST results are available for this feature:
BLAST of EY728681 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 119
Match NameE-valueIdentityDescription
ALLB_SOLUE2.024e-2435.09Allantoinase OS=Solibacter usitatus (strain Ellin6... [more]
ALLB_BACLD9.828e-2436.00Allantoinase OS=Bacillus licheniformis (strain DSM... [more]
ALLB_ECOUT2.759e-2335.39Allantoinase OS=Escherichia coli (strain UTI89 / U... [more]
ALLB_ECOSM2.759e-2335.39Allantoinase OS=Escherichia coli (strain SMS-3-5 /... [more]
ALLB_ECOLI2.759e-2335.39Allantoinase OS=Escherichia coli (strain K12) GN=a... [more]
ALLB_ECOL62.759e-2335.39Allantoinase OS=Escherichia coli O6 GN=allB PE=3 S... [more]
ALLB_ECOL52.759e-2335.39Allantoinase OS=Escherichia coli O6:K15:H31 (strai... [more]
ALLB_ECOK12.759e-2335.39Allantoinase OS=Escherichia coli O1:K1 / APEC GN=a... [more]
ALLB_ECODH2.759e-2335.39Allantoinase OS=Escherichia coli (strain K12 / DH1... [more]
ALLB_ECOBW2.759e-2335.39Allantoinase OS=Escherichia coli (strain K12 / BW2... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-007-B08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728681 ID=EY728681; Name=EY728681; organism=Citrus sinensis; type=EST; length=869bp
CACGCGTCCGGTAAAACTCGAAGATGATACACTTGACACTCGATCTTATT
CAACATATCTGAAGACAAGGCCACCTTCATGGGAGGAAGCGGCTATCAGA
GAACTCTTGACAGTAGCAAAGGACACGAGGACAGATGGCCCTGCAGAAGG
AGCTCATCTTCACATTGTTCATTTATCTGATGCTAGTTCTTCCTTGGATC
TATTAATGGAAGCAAAAACTAATGGTGACAGCATAACTGTTGAGACATGC
CCGCACTACTTGGCTTTCTCAGCAGAGGAGATTCCTGATGGAGATACTCG
GTTCAAATGTGCTCCGCCCATACGTGATGCAGCAAATAAAGAAAAATTAT
GGGAGGCTCTGATGGATGGACACATTGATATGCTAAGCTCTGATCATTCA
CCAACCGTGCCAGAACTTAAACTCCTTGATGAAGGCAACTTTTTGAAAGC
TTGGGGTGGCATATCATCTTTGCAGTTTGTTCTTCCTGTCACGTGGTCTT
ATGGGCGGAAATATGGAGTAACTTTAGAACAGTTAGCTTCATGGTGGAGT
GAGAGACCTGCCAAGCTTGCTGGACAAGTTCAAAGGGTGCCATTGCAATT
GGAAATCATGCAGACCTAGTTGTATGGGAACTGAAGCGGAGTTTGAATTG
ACAATGNACATCCTGTACACTGGAGCATCCAGCATCTCCGCTATTGGGGA
AGAAATCTCGGGAAATCTGCCCCATAGACTAAGACGCGTGTCTCCATGTA
AACTGGCNNNNNNNNNNANGGGANNNANNNNNCCNGCNNNCTGTGNTTTC
CNTCCTCNCGACCTTACCNTCAAATTNNATAATATTTATTTCCCTTATCC
CCCCAAACCACGATCTANC
back to top