EY728681

Overview
NameEY728681
Unique NameEY728681
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length869
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728681 vs. ExPASy Swiss-Prot
Match: PYRC_METKA (Dihydroorotase OS=Methanopyrus kandleri GN=pyrC PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.423e-11
Identity = 53/181 (29.28%), Postives = 83/181 (45.86%), Query Frame = 2
Query:   41 RSYSTYLKTRPPSWEEAAIREL--LTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAGQ 577
            R+   +LK RPP  E  A+  L  L V   +R         +H+ H                 G  ITV+  PH+L F    +   D  FK  PP+R   ++  L  A+  G +D+L+SDH+P + E    DE  F     G++  + +LP   +  R++G++L    +  + RPAKL G+
Sbjct:  193 RNLYEHLKNRPPEAETTAVGLLAGLKVRYPSR---------IHLSHVTLPESVKI------AKGADITVDVTPHHLFFDVLRVDPEDPVFKVNPPLRGRHHRLGLLRAVRRGDVDVLASDHAPHILE----DE--FEDVPSGVTGGEIILPAALTLHRRFGLSLRDAVAMITCRPAKLLGR 352          
BLAST of EY728681 vs. ExPASy Swiss-Prot
Match: PYRC_LACGA (Dihydroorotase OS=Lactobacillus gasseri (strain ATCC 33323 / DSM 20243) GN=pyrC PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.164e-11
Identity = 45/144 (31.25%), Postives = 71/144 (49.31%), Query Frame = 2
Query:  149 GAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGI--SSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAG 574
            G H HI H           + AK  G ++T E  PH++  +  +IP  +  FK  PP+R+  ++  L   L+DG ID++++DH+P     K   +G    A  GI  S   F    T     +  ++LEQL +  S++PAK+ G
Sbjct:  221 GVHYHICHVSTKTSVELVRL-AKARGINVTCEVAPHHILLTDSDIPKDNGYFKMNPPLRNKEDQAALLVGLLDGTIDLIATDHAPHAKSEK---QGGMKNAAFGITGSETAFSTLYTKFVKEEKVLSLEQLLALLSDKPAKVFG 360          
BLAST of EY728681 vs. ExPASy Swiss-Prot
Match: PYRC_LACF3 (Dihydroorotase OS=Lactobacillus fermentum (strain IFO 3956 / LMG 18251) GN=pyrC PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.164e-11
Identity = 55/177 (31.07%), Postives = 82/177 (46.33%), Query Frame = 2
Query:   41 RSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEG-NFLKAWGGISSLQFVLPVTWSYGRKYG-VTLEQLASWWSERPAK 565
            RS    L   P   E A +   L +AK T       G H H+ H             AK NG  +T E  PH+L  S + I   D+ +K  PP+R  A++  L  AL DG +DM+++DH+P   E    D+G +F  A  GI+  +    + ++   K G + LE+L    +  PA+
Sbjct:  197 RSRYLGLPGAPEVVESAQVARDLALAKAT-------GVHYHVCHVSTKDSLAMIHF-AKQNGVRVTCEATPHHLLLSDQCIDGHDSNYKMNPPLRHEADRRALVAALNDGTVDMIATDHAPHTEE----DKGRDFCCAANGITGSETAFALLYTKLVKTGLLKLERLLDLMATNPAE 361          
BLAST of EY728681 vs. ExPASy Swiss-Prot
Match: PYRC_PELCD (Dihydroorotase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=pyrC PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.206e-11
Identity = 49/180 (27.22%), Postives = 80/180 (44.44%), Query Frame = 2
Query:   23 DDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPA 562
            D  ++    +T L  R   W    + E+  VA+D         A LH+ H             AK  G  +T ET PHY   + + +   DT  K  PP+R + + E + E L DG + ++++DH+P  P+ K ++   F  A  GI  L+  LP+T     +  ++L    +  +  PA
Sbjct:  188 DGVMNDGFVATELGLRGIPW----VAEVSAVARDVML-AEYTNARLHVAHVSTRGAVEIIRA-AKARGARVTAETAPHYFTLTEDAVRGYDTHAKMNPPLRTSDDLEAIREGLADGTLSVIATDHAPHHPDEKNVE---FNLALNGIIGLETALPLTLRLVEEGALSLSDAIACLTSGPA 358          
BLAST of EY728681 vs. ExPASy Swiss-Prot
Match: PYRC_LACPL (Dihydroorotase OS=Lactobacillus plantarum GN=pyrC PE=3 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 9.206e-11
Identity = 49/161 (30.43%), Postives = 75/161 (46.58%), Query Frame = 2
Query:   95 IRELLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYG-VTLEQLASWWSERPAKLAG 574
            + E   VA+D      A G H H+ H             AK  G ++T E  PH+L    E+I   +   K  PP+R A ++  L   L+DG IDM+++DH+P     K   +G+   A  GI+ ++      ++   K   +TL +L    S RPA+L G
Sbjct:  209 VSEAAQVARDVML-AEASGVHYHVCHVSTAESLRVIR-NAKAAGINVTCEVSPHHLLLCDEDITMDNPMLKMNPPLRSAKDRAALVAGLLDGTIDMIATDHAPHTDAEK---QGSMKTAAFGITGIETAFATLYTALVKTRLLTLGRLIELMSTRPAELFG 364          
BLAST of EY728681 vs. ExPASy Swiss-Prot
Match: PYRC_LACJO (Dihydroorotase OS=Lactobacillus johnsonii GN=pyrC PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.206e-11
Identity = 45/144 (31.25%), Postives = 68/144 (47.22%), Query Frame = 2
Query:  149 GAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGI--SSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAG 574
            G H HI H           + AK  G  +T E  PH++  +  +IP+ +  FK  PP+R   ++  L   L+DG ID++++DH+   P  K   +G    A  GI  S   F    T     +   TLEQL S  +++PA + G
Sbjct:  221 GVHYHICHVSTKTSVELVRL-AKARGIKVTCEVAPHHILLTDSDIPEDNAYFKMNPPLRSKEDQVALLVGLLDGTIDLIATDHA---PHAKAEKQGGMRGAAFGITGSETAFSTLYTRFVKEEKVFTLEQLLSLLTDKPATVFG 360          
BLAST of EY728681 vs. ExPASy Swiss-Prot
Match: PHYDA_ECOUT (D-phenylhydantoinase OS=Escherichia coli (strain UTI89 / UPEC) GN=hyuA PE=3 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 9.206e-11
Identity = 48/173 (27.75%), Postives = 85/173 (49.13%), Query Frame = 2
Query:   65 TRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGD-TRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSP-TVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYG-VTLEQLASWWSERPAKLAG 574
            +RP   E  AI  ++ +A+       A  A L+IVH           + A+ N   + VETCP YL          D  +F  +PP+R+   ++KLW  + DG ID++++DH   ++ +   + +G+F +   G+  ++  + + +S G   G ++LE+     S  PA+L G
Sbjct:  210 SRPLECEAEAIARMINLAQI------AGNAPLYIVHLSNGLGLDYLRL-ARANHQPVWVETCPQYLLLDERSYDTEDGMKFILSPPLRNVREQDKLWCGISDGAIDVVATDHCTFSMAQRLQISKGDFSRCPNGLPGVENRMQLLFSSGVMTGRISLERFVELTSAMPARLFG 375          
BLAST of EY728681 vs. ExPASy Swiss-Prot
Match: PHYDA_ECOK1 (D-phenylhydantoinase OS=Escherichia coli O1:K1 / APEC GN=hyuA PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.206e-11
Identity = 48/173 (27.75%), Postives = 85/173 (49.13%), Query Frame = 2
Query:   65 TRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGD-TRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSP-TVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYG-VTLEQLASWWSERPAKLAG 574
            +RP   E  AI  ++ +A+       A  A L+IVH           + A+ N   + VETCP YL          D  +F  +PP+R+   ++KLW  + DG ID++++DH   ++ +   + +G+F +   G+  ++  + + +S G   G ++LE+     S  PA+L G
Sbjct:  210 SRPLECEAEAIARMINLAQI------AGNAPLYIVHLSNGLGLDYLRL-ARANHQPVWVETCPQYLLLDERSYDTEDGMKFILSPPLRNVREQDKLWCGISDGAIDVVATDHCTFSMAQRLQISKGDFSRCPNGLPGVENRMQLLFSSGVMTGRISLERFVELTSAMPARLFG 375          
BLAST of EY728681 vs. ExPASy Swiss-Prot
Match: PHYDA_ECO45 (D-phenylhydantoinase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=hyuA PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.206e-11
Identity = 48/173 (27.75%), Postives = 85/173 (49.13%), Query Frame = 2
Query:   65 TRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGD-TRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSP-TVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYG-VTLEQLASWWSERPAKLAG 574
            +RP   E  AI  ++ +A+       A  A L+IVH           + A+ N   + VETCP YL          D  +F  +PP+R+   ++KLW  + DG ID++++DH   ++ +   + +G+F +   G+  ++  + + +S G   G ++LE+     S  PA+L G
Sbjct:  210 SRPLECEAEAIARMINLAQI------AGNAPLYIVHLSNGLGLDYLRL-ARANHQPVWVETCPQYLLLDERSYDTEDGMKFILSPPLRNVREQDKLWCGISDGAIDVVATDHCTFSMAQRLQISKGDFSRCPNGLPGVENRMQLLFSSGVMTGRISLERFVELTSAMPARLFG 375          
The following BLAST results are available for this feature:
BLAST of EY728681 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 119
Match NameE-valueIdentityDescription
PYRC_METKA2.423e-1129.28Dihydroorotase OS=Methanopyrus kandleri GN=pyrC PE... [more]
PYRC_LACGA3.164e-1131.25Dihydroorotase OS=Lactobacillus gasseri (strain AT... [more]
PYRC_LACF33.164e-1131.07Dihydroorotase OS=Lactobacillus fermentum (strain ... [more]
PYRC_PELCD9.206e-1127.22Dihydroorotase OS=Pelobacter carbinolicus (strain ... [more]
PYRC_LACPL9.206e-1130.43Dihydroorotase OS=Lactobacillus plantarum GN=pyrC ... [more]
PYRC_LACJO9.206e-1131.25Dihydroorotase OS=Lactobacillus johnsonii GN=pyrC ... [more]
PHYDA_ECOUT9.206e-1127.75D-phenylhydantoinase OS=Escherichia coli (strain U... [more]
PHYDA_ECOK19.206e-1127.75D-phenylhydantoinase OS=Escherichia coli O1:K1 / A... [more]
PHYDA_ECO459.206e-1127.75D-phenylhydantoinase OS=Escherichia coli O45:K1 (s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-007-B08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728681 ID=EY728681; Name=EY728681; organism=Citrus sinensis; type=EST; length=869bp
CACGCGTCCGGTAAAACTCGAAGATGATACACTTGACACTCGATCTTATT
CAACATATCTGAAGACAAGGCCACCTTCATGGGAGGAAGCGGCTATCAGA
GAACTCTTGACAGTAGCAAAGGACACGAGGACAGATGGCCCTGCAGAAGG
AGCTCATCTTCACATTGTTCATTTATCTGATGCTAGTTCTTCCTTGGATC
TATTAATGGAAGCAAAAACTAATGGTGACAGCATAACTGTTGAGACATGC
CCGCACTACTTGGCTTTCTCAGCAGAGGAGATTCCTGATGGAGATACTCG
GTTCAAATGTGCTCCGCCCATACGTGATGCAGCAAATAAAGAAAAATTAT
GGGAGGCTCTGATGGATGGACACATTGATATGCTAAGCTCTGATCATTCA
CCAACCGTGCCAGAACTTAAACTCCTTGATGAAGGCAACTTTTTGAAAGC
TTGGGGTGGCATATCATCTTTGCAGTTTGTTCTTCCTGTCACGTGGTCTT
ATGGGCGGAAATATGGAGTAACTTTAGAACAGTTAGCTTCATGGTGGAGT
GAGAGACCTGCCAAGCTTGCTGGACAAGTTCAAAGGGTGCCATTGCAATT
GGAAATCATGCAGACCTAGTTGTATGGGAACTGAAGCGGAGTTTGAATTG
ACAATGNACATCCTGTACACTGGAGCATCCAGCATCTCCGCTATTGGGGA
AGAAATCTCGGGAAATCTGCCCCATAGACTAAGACGCGTGTCTCCATGTA
AACTGGCNNNNNNNNNNANGGGANNNANNNNNCCNGCNNNCTGTGNTTTC
CNTCCTCNCGACCTTACCNTCAAATTNNATAATATTTATTTCCCTTATCC
CCCCAAACCACGATCTANC
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