EY728681

Overview
NameEY728681
Unique NameEY728681
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length869
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728681 vs. ExPASy Swiss-Prot
Match: ALLB_ECO55 (Allantoinase OS=Escherichia coli (strain 55989 / EAEC) GN=allB PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.048e-22
Identity = 62/178 (34.83%), Postives = 90/178 (50.56%), Query Frame = 2
Query:   56 YLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYG-RKYGVTLEQLASWWSERPAKLAGQVQR 586
            Y+ +RP   E  AIR +L +AK         G  LH+ H             A+  G  +T E+CPHY     ++  +  T  KC+PPIRD  N++ +WE L +G ID L SDHSP  PE+K    GN ++AWGGI+ LQ  + V +    +K G++L       +   A + G  Q+
Sbjct:  211 YVASRPVFTEVEAIRRVLYLAK-------VAGCRLHVCHISSPEGVEEVT-RARQEGQDVTCESCPHYFVLDTDQFEEIGTLAKCSPPIRDLENQKGMWEKLFNGEIDCLVSDHSPCPPEMK---AGNIMEAWGGIAGLQNCMDVMFDEAVQKRGMSLPMFGKLMATNAADIFGLQQK 377          
BLAST of EY728681 vs. ExPASy Swiss-Prot
Match: ALLB_ECO24 (Allantoinase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=allB PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.048e-22
Identity = 62/178 (34.83%), Postives = 90/178 (50.56%), Query Frame = 2
Query:   56 YLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYG-RKYGVTLEQLASWWSERPAKLAGQVQR 586
            Y+ +RP   E  AIR +L +AK         G  LH+ H             A+  G  +T E+CPHY     ++  +  T  KC+PPIRD  N++ +WE L +G ID L SDHSP  PE+K    GN ++AWGGI+ LQ  + V +    +K G++L       +   A + G  Q+
Sbjct:  211 YVASRPVFTEVEAIRRVLYLAK-------VAGCRLHVCHISSPEGVEEVT-RARQEGQDVTCESCPHYFVLDTDQFEEIGTLAKCSPPIRDLENQKGMWEKLFNGEIDCLVSDHSPCPPEMK---AGNIMEAWGGIAGLQNCMDVMFDEAVQKRGMSLPMFGKLMATNAADIFGLQQK 377          
BLAST of EY728681 vs. ExPASy Swiss-Prot
Match: ALLB_SALG2 (Allantoinase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=allB PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.876e-22
Identity = 61/174 (35.06%), Postives = 88/174 (50.57%), Query Frame = 2
Query:   56 YLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYG-RKYGVTLEQLASWWSERPAKLAG 574
            Y+ +RP   E  AIR +L +AK       A G  LH+ H             A+     +T E+CPHY     ++  +  T  KC+PPIRD  N++ +WE L +G ID L SDHSP  PE+K    GN ++AWGGI+ LQ  + V +    +K G++L       +   A + G
Sbjct:  211 YVASRPVFTEVEAIRRVLYLAK-------AAGCRLHVCHISSPEGVEEVT-RARQEVQDVTCESCPHYFVLDTDQFEEIGTLAKCSPPIRDQENQKGMWEKLFNGEIDCLVSDHSPCPPEMK---AGNIMQAWGGIAGLQNCMDVMFDEAVQKRGMSLPMFGKLMATNAADIFG 373          
BLAST of EY728681 vs. ExPASy Swiss-Prot
Match: ALLB_ENTFA (Allantoinase OS=Enterococcus faecalis GN=allB PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.373e-21
Identity = 62/172 (36.05%), Postives = 91/172 (52.91%), Query Frame = 2
Query:   50 STYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYG-RKYGVTLEQLASWWSERPA 562
            + Y+ TRP   E  AI++ +  AK+T       G  +HI H           ++A+  G  +T ETC HYL F+ +E+       KC+PPIRDA  +  LW  +  G I  ++SDHSP  P+LK  D  N  +AWGGIS +Q  + V +    +K G++L+Q A   +  PA
Sbjct:  212 AAYVATRPVFTEVEAIQKAILFAKET-------GCRIHICHVACQEGVEEV-LKAQAEGVDVTCETCTHYLYFTTDELDAIGPVVKCSPPIRDADQQAALWNHVQTGGIAFVTSDHSPCTPDLK--DTTNAFEAWGGISGVQNNVDVLFDEAVQKRGLSLKQFADMIAANPA 373          
BLAST of EY728681 vs. ExPASy Swiss-Prot
Match: ALLB_BACHD (Allantoinase OS=Bacillus halodurans GN=allB PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.373e-21
Identity = 66/189 (34.92%), Postives = 95/189 (50.26%), Query Frame = 2
Query:   11 VKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYG-RKYGVTLEQLASWWSERPAKLAG 574
            + +E+  L  + YS   + RP   E  A+  +L  A+ T          +HI H            +AK  G +++VETCPHYL FS +E  +     KCAPP+R+    E LW+ LM G ID++SSDHSP++P++K        + WGGI+  Q  L V  + G  K  + L Q+    S  PAK  G
Sbjct:  199 IAIEEQRLTVKDYS---EARPIVSELEAVERILRFAQLTCCP-------IHICHVSSRKVLKRIK-QAKGEGVNVSVETCPHYLLFSLDEFAEIGYLAKCAPPLRERQEVEDLWDGLMAGEIDLISSDHSPSLPQMK--TGKTIFEVWGGIAGCQNTLAVMLTEGYHKRKMPLTQIVQLLSTEPAKRFG 374          
BLAST of EY728681 vs. ExPASy Swiss-Prot
Match: ALLB_RUBXD (Allantoinase OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=allB PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.385e-19
Identity = 61/174 (35.06%), Postives = 85/174 (48.85%), Query Frame = 2
Query:   56 YLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYG-RKYGVTLEQLASWWSERPAKLAG 574
            YL +RP   E  AI   + +A +        G  LHIVH             A+  G  +T ETCPHYL F+ E+        KCAPP+R     E LWE ++ G++  ++SDHSP  P++K  ++    +AWGGIS  Q +LP     G    G+  E+LA   S   A+  G
Sbjct:  208 YLASRPAVAELEAIGRAILLASEA-------GCSLHIVHVSTGRGVALVAA-ARERGVDVTCETCPHYLLFTDEDAVRIGAAAKCAPPLRPREEVESLWEQVLAGNVAFVTSDHSPCPPDMKAGED--MFRAWGGISGCQSLLPALLDEGYHGRGLPPERLAELLSANVARRFG 371          
BLAST of EY728681 vs. ExPASy Swiss-Prot
Match: PYRC_ANOFW (Dihydroorotase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=pyrC PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.501e-16
Identity = 54/159 (33.96%), Postives = 84/159 (52.83%), Query Frame = 2
Query:   92 AIRELLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGV-TLEQLASWWSERPAK 565
            ++ E + +A+D      A G H H+ H            EAK  G  +T E  PH+L    E+IP  D  FK  PP+R   +++ L E L+DG ID +++DH+P   E K   EG  L  + GI  L+   P+ +++  + G+ TL+QL  W S++PA+
Sbjct:  207 SVCESVHIARDVLL-AEATGCHYHVCHISTKQSVRIVR-EAKQAGIRVTAEVTPHHLLLCDEDIPTLDANFKMNPPLRTKEDQQALIEGLLDGTIDFIATDHAPHTKEEK--SEGMVLAPF-GIVGLETAFPLLYTHFVEKGICTLKQLVDWLSKKPAE 360          
BLAST of EY728681 vs. ExPASy Swiss-Prot
Match: ALLB_DESHY (Allantoinase OS=Desulfitobacterium hafniense (strain Y51) GN=allB PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.278e-16
Identity = 59/180 (32.78%), Postives = 89/180 (49.44%), Query Frame = 2
Query:   56 YLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLP--VTWSY-GRKYG-VTLEQLASWWSERPAKLAGQVQ 583
            Y   RPP  E   +  ++T A++T       G  L I H            +A+  G  +  ET  HYL  + +++    T  KC+PPIRD  N+ ++W  L + +I  +SSDHSP  P+LK    G F++ WGGIS+ Q  L   +T +Y  RK+  V + QL +       K+ G+ Q
Sbjct:  209 YFAARPPITEIENVSRMITFAEET-------GCKLIIAHISTAKAVDLVA-QARARGVDVYCETIGHYLYLTGDDVERLGTVAKCSPPIRDGENQLQMWGRLFNDNIAFVSSDHSPCDPKLK---NGEFMRVWGGISACQTTLQGLLTHAYHDRKFPLVKIAQLTAQHVNEIFKIKGKGQ 377          
BLAST of EY728681 vs. ExPASy Swiss-Prot
Match: ALLB_DESHD (Allantoinase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=allB PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.241e-15
Identity = 49/143 (34.27%), Postives = 72/143 (50.35%), Query Frame = 2
Query:   56 YLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVL 484
            Y   RPP  E   +  ++T A++T       G  L I H            +A+  G  +  ET  HYL  + +++    T  KC+PPIRD  N+ ++W  L + +I  +SSDHSP  P+LK    G F++ WGGIS+ Q  L
Sbjct:  209 YFAARPPITEIENVSRMITFAEET-------GCKLIIAHISTAKAVELVA-QARARGVDVYCETIGHYLYLTGDDVERLGTVAKCSPPIRDGENQLQMWGRLFNDNIAFVSSDHSPCDPKLK---NGEFMRVWGGISACQTTL 340          
BLAST of EY728681 vs. ExPASy Swiss-Prot
Match: PYRC_GEOTN (Dihydroorotase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=pyrC PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.047e-15
Identity = 52/164 (31.71%), Postives = 83/164 (50.61%), Query Frame = 2
Query:   92 AIRELLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSP--TVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGV-TLEQLASWWSERPAKLAG 574
            ++ E + +A+D      A G H H+ H            +AK  G  +T E  PH+L    E+IP  D  +K  PP+R  A++E L E L+DG ID +++DH+P     + K ++   F     GI  L+   P+ +++  K  V TL+QL  W + +PA+  G
Sbjct:  208 SVCEAVHIARDVLL-AEATGCHYHVCHISTKESVRVVR-DAKRAGICVTAEVTPHHLLLCDEDIPRLDANYKMNPPLRSRADREALIEGLLDGTIDFIATDHAPHTAAEKAKGMEAAPF-----GIVGLETAFPLLYTHFVKKNVFTLKQLVDWLTIKPAQCFG 364          
The following BLAST results are available for this feature:
BLAST of EY728681 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 119
Match NameE-valueIdentityDescription
ALLB_ECO551.048e-2234.83Allantoinase OS=Escherichia coli (strain 55989 / E... [more]
ALLB_ECO241.048e-2234.83Allantoinase OS=Escherichia coli O139:H28 (strain ... [more]
ALLB_SALG28.876e-2235.06Allantoinase OS=Salmonella gallinarum (strain 287/... [more]
ALLB_ENTFA3.373e-2136.05Allantoinase OS=Enterococcus faecalis GN=allB PE=3... [more]
ALLB_BACHD3.373e-2134.92Allantoinase OS=Bacillus halodurans GN=allB PE=1 S... [more]
ALLB_RUBXD5.385e-1935.06Allantoinase OS=Rubrobacter xylanophilus (strain D... [more]
PYRC_ANOFW2.501e-1633.96Dihydroorotase OS=Anoxybacillus flavithermus (stra... [more]
ALLB_DESHY7.278e-1632.78Allantoinase OS=Desulfitobacterium hafniense (stra... [more]
ALLB_DESHD1.241e-1534.27Allantoinase OS=Desulfitobacterium hafniense (stra... [more]
PYRC_GEOTN8.047e-1531.71Dihydroorotase OS=Geobacillus thermodenitrificans ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-007-B08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728681 ID=EY728681; Name=EY728681; organism=Citrus sinensis; type=EST; length=869bp
CACGCGTCCGGTAAAACTCGAAGATGATACACTTGACACTCGATCTTATT
CAACATATCTGAAGACAAGGCCACCTTCATGGGAGGAAGCGGCTATCAGA
GAACTCTTGACAGTAGCAAAGGACACGAGGACAGATGGCCCTGCAGAAGG
AGCTCATCTTCACATTGTTCATTTATCTGATGCTAGTTCTTCCTTGGATC
TATTAATGGAAGCAAAAACTAATGGTGACAGCATAACTGTTGAGACATGC
CCGCACTACTTGGCTTTCTCAGCAGAGGAGATTCCTGATGGAGATACTCG
GTTCAAATGTGCTCCGCCCATACGTGATGCAGCAAATAAAGAAAAATTAT
GGGAGGCTCTGATGGATGGACACATTGATATGCTAAGCTCTGATCATTCA
CCAACCGTGCCAGAACTTAAACTCCTTGATGAAGGCAACTTTTTGAAAGC
TTGGGGTGGCATATCATCTTTGCAGTTTGTTCTTCCTGTCACGTGGTCTT
ATGGGCGGAAATATGGAGTAACTTTAGAACAGTTAGCTTCATGGTGGAGT
GAGAGACCTGCCAAGCTTGCTGGACAAGTTCAAAGGGTGCCATTGCAATT
GGAAATCATGCAGACCTAGTTGTATGGGAACTGAAGCGGAGTTTGAATTG
ACAATGNACATCCTGTACACTGGAGCATCCAGCATCTCCGCTATTGGGGA
AGAAATCTCGGGAAATCTGCCCCATAGACTAAGACGCGTGTCTCCATGTA
AACTGGCNNNNNNNNNNANGGGANNNANNNNNCCNGCNNNCTGTGNTTTC
CNTCCTCNCGACCTTACCNTCAAATTNNATAATATTTATTTCCCTTATCC
CCCCAAACCACGATCTANC
back to top