EY728681

Overview
NameEY728681
Unique NameEY728681
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length869
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728681 vs. ExPASy Swiss-Prot
Match: PYRC_BACCN (Dihydroorotase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=pyrC PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.216e-14
Identity = 51/162 (31.48%), Postives = 82/162 (50.62%), Query Frame = 2
Query:   92 AIRELLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYG-VTLEQLASWWSERPAKLAG 574
            ++ E + +A+D      A+  H H+ H            +AK  G  +T E  PH+L    ++IP  D  FK  PP+R   ++E L E L+DG ID++++DH+P   E K        +A  GI+  +   P+ ++   K G +TLEQL  + +E+PA   G
Sbjct:  206 SVCESVHIARDILLAEAAD-CHYHVCHVSTKGSVRVIR-DAKRAGIKVTAEVTPHHLVLCEDDIPSVDPNFKMNPPLRGREDQEALIEGLLDGTIDIIATDHAPHTAEEK---AQGIERAPFGITGFETAFPLLYTNLVKKGIITLEQLIQFLTEKPADTFG 362          
BLAST of EY728681 vs. ExPASy Swiss-Prot
Match: PYRC_BACC4 (Dihydroorotase OS=Bacillus cereus (strain B4264) GN=pyrC PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.216e-14
Identity = 52/162 (32.10%), Postives = 80/162 (49.38%), Query Frame = 2
Query:   92 AIRELLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGV-TLEQLASWWSERPAKLAG 574
            ++ E + +A+D      A+  H H+ H            +AK  G  +T E  PH+L    ++IP  D  FK  PP+R   +   L E L+DG IDM+++DH+P   E K        +A  GI+  +   P+ ++   K GV TLEQL  + +E+PA   G
Sbjct:  206 SVCESVHIARDILLAEAAD-CHYHVCHVSTKGSVRVIR-DAKRAGIKVTAEVTPHHLVLCEDDIPSADPNFKMNPPLRGKEDHAALIEGLLDGTIDMIATDHAPHTAEEK---AQGIERAPFGITGFETAFPLLYTNLVKKGVITLEQLIQFLTEKPADTFG 362          
BLAST of EY728681 vs. ExPASy Swiss-Prot
Match: PYRC_THEAQ (Dihydroorotase OS=Thermus aquaticus GN=pyrC PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.812e-14
Identity = 59/183 (32.24%), Postives = 86/183 (46.99%), Query Frame = 2
Query:   59 LKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWS-YGRKYGVTLEQLASWWSERPAKLAGQVQRVPLQLE 604
            L   PP  E A I   L V +      PA    LH+ H            EAK  G  +T E  PH+L  + E +   D  FK APP+R   ++E L E L+DG +D +++DH+P     K +D    L+A  GI SL+   P+ ++    K G  L +L   +++ P ++ G     PL LE
Sbjct:  197 LPGNPPEAEAARIARDLEVLRYALRRSPAT-PRLHVQHLSTKRGLELVR-EAKRAGLPVTAEATPHHLTLTEEALRTFDPLFKVAPPLRGEEDREALLEGLLDGTLDAIATDHAPHTQAEKEMD---LLRAPFGIPSLEVAFPLLYTELHLKRGFPLRRLVELFTDGPRRVLG---LPPLHLE 371          
BLAST of EY728681 vs. ExPASy Swiss-Prot
Match: PYRC_STAEQ (Dihydroorotase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=pyrC PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.812e-14
Identity = 48/159 (30.19%), Postives = 81/159 (50.94%), Query Frame = 2
Query:   95 IRELLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWS-YGRKYGVTLEQLASWWSERPAKL 568
            I E + +A+D      A G H H+ H            +AK  G  +T E  PH+L  +  ++P  D+ +K  PP+R   ++E L E L+DG ID +++DH+P   E K   E    KA  GI   +   P+ ++ + R+   +L+QL  +++ +PA +
Sbjct:  207 IAESVQIARDVLL-AEATGCHYHVCHVSTKESVRVIR-DAKKAGIHVTAEVTPHHLLLTENDVPGDDSNYKMNPPLRSNEDREALLEGLLDGTIDCIATDHAPHAKEEK---EQPMTKAPFGIVGSETAFPLLYTHFVRRGNWSLQQLVDYFTIKPATI 360          
BLAST of EY728681 vs. ExPASy Swiss-Prot
Match: PYRC_LYSSC (Dihydroorotase OS=Lysinibacillus sphaericus (strain C3-41) GN=pyrC PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.812e-14
Identity = 51/160 (31.87%), Postives = 79/160 (49.38%), Query Frame = 2
Query:   92 AIRELLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGV-TLEQLASWWSERPAKL 568
            +I E + +A+D      A GA  H+ H            +AK  G  +T E CPH+L     +IP  D  +K  PP+R A +K+ L  AL+DG ID +++DH+P   E K       + A  GI   +   P+ ++   + G  TL+QL  W S + A++
Sbjct:  206 SICESVQIARDVLL-AEAAGARYHVCHVSTKESVRAVR-DAKAAGIRVTAEVCPHHLLLEEMDIPSDDANWKMNPPLRGADDKDSLHAALLDGTIDCIATDHAPHTVEEKCC---GMVGAPFGIVGFETAFPLLYTQFVETGKWTLKQLIDWMSVKAAEI 360          
BLAST of EY728681 vs. ExPASy Swiss-Prot
Match: PYRC_LISIN (Dihydroorotase OS=Listeria innocua GN=pyrC PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.812e-14
Identity = 50/158 (31.65%), Postives = 78/158 (49.37%), Query Frame = 2
Query:   95 IRELLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGV-TLEQLASWWSERPAK 565
            I E + +A+D      A G H H+ H            +AK  G  +T E  PH+L    E+IP  D  +K  PP+R   ++  L E L+DG ID +++DH+P   E K +      +A  GI  L+   P+ +++  K    TL+QL  W + +PA+
Sbjct:  206 IAESVQIARDVLL-AEAAGCHYHVCHISTKESVRVVR-DAKRAGIRVTAEVSPHHLILDEEDIPGNDGNWKMNPPLRSKEDRAALLEGLLDGTIDFIATDHAPHAAEEKNVP---MEQAAFGIVGLETAFPLLYTHFVKTNEWTLKQLIDWMTVKPAE 358          
BLAST of EY728681 vs. ExPASy Swiss-Prot
Match: PYRC_BACHK (Dihydroorotase OS=Bacillus thuringiensis subsp. konkukian GN=pyrC PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.812e-14
Identity = 51/162 (31.48%), Postives = 80/162 (49.38%), Query Frame = 2
Query:   92 AIRELLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYG-VTLEQLASWWSERPAKLAG 574
            ++ E + +A+D      A+  H H+ H            +AK  G  +T E  PH+L    ++IP  D  FK  PP+R   +   L E L+DG IDM+++DH+P   E K        +A  GI+  +   P+ ++   K G +TLEQL  + +E+PA   G
Sbjct:  206 SVCESVHIARDILLAEAAD-CHYHVCHVSTKGSVRVIR-DAKRAGIKVTAEVTPHHLVLCEDDIPSADPNFKMNPPLRGKEDHAALIEGLLDGTIDMIATDHAPHTAEEK---AQGIERAPFGITGFETAFPLLYTNLVKKGIITLEQLIQFLTEKPADTFG 362          
BLAST of EY728681 vs. ExPASy Swiss-Prot
Match: PYRC_BACCZ (Dihydroorotase OS=Bacillus cereus (strain ZK / E33L) GN=pyrC PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.812e-14
Identity = 51/162 (31.48%), Postives = 80/162 (49.38%), Query Frame = 2
Query:   92 AIRELLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYG-VTLEQLASWWSERPAKLAG 574
            ++ E + +A+D      A+  H H+ H            +AK  G  +T E  PH+L    ++IP  D  FK  PP+R   +   L E L+DG IDM+++DH+P   E K        +A  GI+  +   P+ ++   K G +TLEQL  + +E+PA   G
Sbjct:  206 SVCESVHIARDILLAEAAD-CHYHVCHVSTKGSVRVIR-DAKRAGIKVTAEVTPHHLVLCEDDIPSADPNFKMNPPLRGKEDHAALIEGLLDGTIDMIATDHAPHTAEEK---AQGIERAPFGITGFETAFPLLYTNLVKKGIITLEQLIQFLTEKPADTFG 362          
BLAST of EY728681 vs. ExPASy Swiss-Prot
Match: PYRC_BACCQ (Dihydroorotase OS=Bacillus cereus (strain Q1) GN=pyrC PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.812e-14
Identity = 51/162 (31.48%), Postives = 80/162 (49.38%), Query Frame = 2
Query:   92 AIRELLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYG-VTLEQLASWWSERPAKLAG 574
            ++ E + +A+D      A+  H H+ H            +AK  G  +T E  PH+L    ++IP  D  FK  PP+R   +   L E L+DG IDM+++DH+P   E K        +A  GI+  +   P+ ++   K G +TLEQL  + +E+PA   G
Sbjct:  206 SVCESVHIARDILLAEAAD-CHYHVCHVSTKGSVRVIR-DAKRAGIKVTAEVTPHHLVLCEDDIPSADPNFKMNPPLRGKEDHAALIEGLLDGTIDMIATDHAPHTAEEK---AQGIERAPFGITGFETAFPLLYTNLVKKGIITLEQLIQFLTEKPADTFG 362          
BLAST of EY728681 vs. ExPASy Swiss-Prot
Match: PYRC_BACC7 (Dihydroorotase OS=Bacillus cereus (strain AH187) GN=pyrC PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.812e-14
Identity = 51/162 (31.48%), Postives = 80/162 (49.38%), Query Frame = 2
Query:   92 AIRELLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYG-VTLEQLASWWSERPAKLAG 574
            ++ E + +A+D      A+  H H+ H            +AK  G  +T E  PH+L    ++IP  D  FK  PP+R   +   L E L+DG IDM+++DH+P   E K        +A  GI+  +   P+ ++   K G +TLEQL  + +E+PA   G
Sbjct:  206 SVCESVHIARDILLAEAAD-CHYHVCHVSTKGSVRVIR-DAKRAGIKVTAEVTPHHLVLCEDDIPSADPNFKMNPPLRGKEDHAALIEGLLDGTIDMIATDHAPHTAEEK---AQGIERAPFGITGFETAFPLLYTNLVKKGIITLEQLIQFLTEKPADTFG 362          
The following BLAST results are available for this feature:
BLAST of EY728681 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 119
Match NameE-valueIdentityDescription
PYRC_BACCN5.216e-1431.48Dihydroorotase OS=Bacillus cereus subsp. cytotoxis... [more]
PYRC_BACC45.216e-1432.10Dihydroorotase OS=Bacillus cereus (strain B4264) G... [more]
PYRC_THEAQ6.812e-1432.24Dihydroorotase OS=Thermus aquaticus GN=pyrC PE=3 S... [more]
PYRC_STAEQ6.812e-1430.19Dihydroorotase OS=Staphylococcus epidermidis (stra... [more]
PYRC_LYSSC6.812e-1431.88Dihydroorotase OS=Lysinibacillus sphaericus (strai... [more]
PYRC_LISIN6.812e-1431.65Dihydroorotase OS=Listeria innocua GN=pyrC PE=3 SV... [more]
PYRC_BACHK6.812e-1431.48Dihydroorotase OS=Bacillus thuringiensis subsp. ko... [more]
PYRC_BACCZ6.812e-1431.48Dihydroorotase OS=Bacillus cereus (strain ZK / E33... [more]
PYRC_BACCQ6.812e-1431.48Dihydroorotase OS=Bacillus cereus (strain Q1) GN=p... [more]
PYRC_BACC76.812e-1431.48Dihydroorotase OS=Bacillus cereus (strain AH187) G... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-007-B08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728681 ID=EY728681; Name=EY728681; organism=Citrus sinensis; type=EST; length=869bp
CACGCGTCCGGTAAAACTCGAAGATGATACACTTGACACTCGATCTTATT
CAACATATCTGAAGACAAGGCCACCTTCATGGGAGGAAGCGGCTATCAGA
GAACTCTTGACAGTAGCAAAGGACACGAGGACAGATGGCCCTGCAGAAGG
AGCTCATCTTCACATTGTTCATTTATCTGATGCTAGTTCTTCCTTGGATC
TATTAATGGAAGCAAAAACTAATGGTGACAGCATAACTGTTGAGACATGC
CCGCACTACTTGGCTTTCTCAGCAGAGGAGATTCCTGATGGAGATACTCG
GTTCAAATGTGCTCCGCCCATACGTGATGCAGCAAATAAAGAAAAATTAT
GGGAGGCTCTGATGGATGGACACATTGATATGCTAAGCTCTGATCATTCA
CCAACCGTGCCAGAACTTAAACTCCTTGATGAAGGCAACTTTTTGAAAGC
TTGGGGTGGCATATCATCTTTGCAGTTTGTTCTTCCTGTCACGTGGTCTT
ATGGGCGGAAATATGGAGTAACTTTAGAACAGTTAGCTTCATGGTGGAGT
GAGAGACCTGCCAAGCTTGCTGGACAAGTTCAAAGGGTGCCATTGCAATT
GGAAATCATGCAGACCTAGTTGTATGGGAACTGAAGCGGAGTTTGAATTG
ACAATGNACATCCTGTACACTGGAGCATCCAGCATCTCCGCTATTGGGGA
AGAAATCTCGGGAAATCTGCCCCATAGACTAAGACGCGTGTCTCCATGTA
AACTGGCNNNNNNNNNNANGGGANNNANNNNNCCNGCNNNCTGTGNTTTC
CNTCCTCNCGACCTTACCNTCAAATTNNATAATATTTATTTCCCTTATCC
CCCCAAACCACGATCTANC
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