EY728681

Overview
NameEY728681
Unique NameEY728681
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length869
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728681 vs. ExPASy Swiss-Prot
Match: PYRC_BACC3 (Dihydroorotase OS=Bacillus cereus (strain 03BB102) GN=pyrC PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.812e-14
Identity = 51/162 (31.48%), Postives = 80/162 (49.38%), Query Frame = 2
Query:   92 AIRELLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYG-VTLEQLASWWSERPAKLAG 574
            ++ E + +A+D      A+  H H+ H            +AK  G  +T E  PH+L    ++IP  D  FK  PP+R   +   L E L+DG IDM+++DH+P   E K        +A  GI+  +   P+ ++   K G +TLEQL  + +E+PA   G
Sbjct:  206 SVCESVHIARDILLAEAAD-CHYHVCHVSTKGSVRVIR-DAKRAGIKVTAEVTPHHLVLCEDDIPSADPNFKMNPPLRGKEDHAALIEGLLDGTIDMIATDHAPHTAEEK---AQGIERAPFGITGFETAFPLLYTNLVKKGIITLEQLIQFLTEKPADTFG 362          
BLAST of EY728681 vs. ExPASy Swiss-Prot
Match: PYRC_BACC1 (Dihydroorotase OS=Bacillus cereus (strain ATCC 10987) GN=pyrC PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.812e-14
Identity = 51/162 (31.48%), Postives = 80/162 (49.38%), Query Frame = 2
Query:   92 AIRELLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYG-VTLEQLASWWSERPAKLAG 574
            ++ E + +A+D      A+  H H+ H            +AK  G  +T E  PH+L    ++IP  D  FK  PP+R   +   L E L+DG IDM+++DH+P   E K        +A  GI+  +   P+ ++   K G +TLEQL  + +E+PA   G
Sbjct:  206 SVCESVHIARDILLAEAAD-CHYHVCHVSTKGSVRVIR-DAKRAGIKVTAEVTPHHLVLCEDDIPSADPNFKMNPPLRGKEDHAALIEGLLDGTIDMIATDHAPHTAEEK---AQGIERAPFGITGFETAFPLLYTNLVKKGIITLEQLIQFLTEKPADTFG 362          
BLAST of EY728681 vs. ExPASy Swiss-Prot
Match: PYRC_BACAH (Dihydroorotase OS=Bacillus thuringiensis (strain Al Hakam) GN=pyrC PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.812e-14
Identity = 51/162 (31.48%), Postives = 80/162 (49.38%), Query Frame = 2
Query:   92 AIRELLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYG-VTLEQLASWWSERPAKLAG 574
            ++ E + +A+D      A+  H H+ H            +AK  G  +T E  PH+L    ++IP  D  FK  PP+R   +   L E L+DG IDM+++DH+P   E K        +A  GI+  +   P+ ++   K G +TLEQL  + +E+PA   G
Sbjct:  206 SVCESVHIARDILLAEAAD-CHYHVCHVSTKGSVRVIR-DAKRAGIKVTAEVTPHHLVLCEDDIPSADPNFKMNPPLRGKEDHAALIEGLLDGTIDMIATDHAPHTAEEK---AQGIERAPFGITGFETAFPLLYTNLVKKGIITLEQLIQFLTEKPADTFG 362          
BLAST of EY728681 vs. ExPASy Swiss-Prot
Match: PYRC_LISW6 (Dihydroorotase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=pyrC PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.897e-14
Identity = 50/158 (31.65%), Postives = 79/158 (50.00%), Query Frame = 2
Query:   95 IRELLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWS-YGRKYGVTLEQLASWWSERPAK 565
            I E + +A+D      A G H H+ H            +AK  G  +T E  PH+L    E IP  D ++K  PP+R  A++  L E L+DG ID +++DH+P   E K +      +A  GI  L+   P+ ++ + +    TL+QL  W + +PA+
Sbjct:  206 IAESVQIARDVLL-AEAAGCHYHVCHISTKESVRVVR-DAKRAGIRVTAEVSPHHLILDEEAIPGNDGQWKMNPPLRSKADRAALLEGLLDGTIDFIATDHAPHAAEEKNVP---MEQAAFGIVGLETAFPLLYTHFVQTNEWTLKQLIDWMTVKPAE 358          
BLAST of EY728681 vs. ExPASy Swiss-Prot
Match: PYRC_LISMH (Dihydroorotase OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=pyrC PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.897e-14
Identity = 51/158 (32.28%), Postives = 78/158 (49.37%), Query Frame = 2
Query:   95 IRELLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGV-TLEQLASWWSERPAK 565
            I E + +A+D      A G H H+ H            +AK  G  +T E  PH+L    E IP  D  +K  PP+R  A++  L E L+DG ID +++DH+P   E K +      +A  GI  L+   P+ +++  K    TL+QL  W + +PA+
Sbjct:  206 IAESVQIARDVLL-AEAAGCHYHVCHISTKESVRVVR-DAKRAGIRVTAEVSPHHLILDEEAIPGNDGNWKMNPPLRSKADRAALLEGLLDGTIDFIATDHAPHAAEEKNVP---MEQAAFGIVGLETGFPLLYTHFVKTNEWTLKQLIDWMTVKPAE 358          
BLAST of EY728681 vs. ExPASy Swiss-Prot
Match: PYRC_BACLD (Dihydroorotase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=pyrC PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.897e-14
Identity = 51/162 (31.48%), Postives = 80/162 (49.38%), Query Frame = 2
Query:   92 AIRELLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGV-TLEQLASWWSERPAKLAG 574
            ++ E + +A+D      A G H H+ H            +AK  G  +T E  PH+L  S  +IP  DT +K  PP+R   ++E L E L DG ID +++DH+P   E K   +     A  GI  L+   P+ +++  K G  TL+QL  + + +P +  G
Sbjct:  206 SVCEAVHIARDVLL-AEAAGCHYHVCHISTKESVRVVR-DAKKAGIRVTAEVTPHHLLLSDSDIPGLDTNYKMNPPLRSPEDREALLEGLRDGTIDFIATDHAPHTEEEK---QQTMSLAPFGIVGLETAFPLLYTHFVKTGKWTLKQLHDYMTVKPCEAFG 362          
BLAST of EY728681 vs. ExPASy Swiss-Prot
Match: PYRC_LACS1 (Dihydroorotase OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=pyrC PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.162e-13
Identity = 51/165 (30.91%), Postives = 84/165 (50.91%), Query Frame = 2
Query:   83 EEAAIRELLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGV-TLEQLASWWSERPAKLAG 574
            E + I   L +AK+T       G H H+ H           + AK +  ++T E  PH+L  +  +IP  D  +K  PP+R   +++ L ++L+DG IDM+++DH+P   + K    G+  +A  GI+  +    + ++   K G+ TLEQL  W S  PA+  G
Sbjct:  211 ESSQIARDLLLAKET-------GVHYHVCHVSTKESVELVRL-AKQHKINVTCEVSPHHLLLADVDIPGNDPYYKMNPPLRGVEDRQALIDSLLDGTIDMIATDHAPHSIDEK---TGDMREASFGITGSETAFAMLYTKFVKTGIFTLEQLLQWMSINPAEKFG 364          
BLAST of EY728681 vs. ExPASy Swiss-Prot
Match: PYRC_GEOSM (Dihydroorotase OS=Geobacter sp. (strain M21) GN=pyrC PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.162e-13
Identity = 50/142 (35.21%), Postives = 69/142 (48.59%), Query Frame = 2
Query:  149 GAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAKLAG 574
            GA +HI H             AK  G  +T ET PHY   + E +   DT  K  PP+R AA+ E +   L DG ID +++DH+P  P+ K   +  F  A  GI  L+  LP++     +  + L QL S  S  PAK+ G
Sbjct:  226 GAPVHIAHISTVGSARIVR-NAKARGVKVTCETAPHYFTLTDEAVRGYDTNAKMNPPLRSAADIEAMKAGLADGTIDAIATDHAPHHPDEK---DVEFNVALNGIVGLETSLPLSLKLVEEGRLDLNQLVSLMSCNPAKILG 363          
BLAST of EY728681 vs. ExPASy Swiss-Prot
Match: PYRC_ENTFA (Dihydroorotase OS=Enterococcus faecalis GN=pyrC PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.162e-13
Identity = 51/165 (30.91%), Postives = 85/165 (51.52%), Query Frame = 2
Query:   83 EEAAIRELLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGV-TLEQLASWWSERPAKLAG 574
            E + I   +T+AK+T       G H H+ H            +AK  G  +T E  PH+L    E+IP  +  +K  PP+R  A+++ L + L+DG ID +++DH+P   E K   + +FL A  GI   +    + ++   + G+ TLEQ+  W + +PA++ G
Sbjct:  210 EASQIARDITLAKET-------GVHYHVCHVSTEESVRVIR-DAKKAGIHVTAEVSPHHLILVDEDIPGDEGFWKMNPPLRGLADRQALIDGLLDGTIDCIATDHAPHGLEEK---QQSFLNAPFGIVGSETAFQLIYTNFVETGIFTLEQVIDWMAVKPAEIFG 363          
BLAST of EY728681 vs. ExPASy Swiss-Prot
Match: PYRC_LISMO (Dihydroorotase OS=Listeria monocytogenes GN=pyrC PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.518e-13
Identity = 50/158 (31.65%), Postives = 77/158 (48.73%), Query Frame = 2
Query:   95 IRELLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGV-TLEQLASWWSERPAK 565
            I E + +A+D      A G H H+ H            +AK  G  +T E  PH+L    E IP  D  +K  PP+R   ++  L E L+DG ID +++DH+P   E K +      +A  GI  L+   P+ +++  K    TL+QL  W + +PA+
Sbjct:  206 IAESVQIARDVLL-AEAAGCHYHVCHISTKESVRVVR-DAKRAGIRVTAEVSPHHLILDEEAIPGNDGNWKMNPPLRSKEDRAALLEGLLDGTIDFIATDHAPHAAEEKNVP---MEQAAFGIVGLETAFPLLYTHFVKTNEWTLKQLIDWMTVKPAE 358          
The following BLAST results are available for this feature:
BLAST of EY728681 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 119
Match NameE-valueIdentityDescription
PYRC_BACC36.812e-1431.48Dihydroorotase OS=Bacillus cereus (strain 03BB102)... [more]
PYRC_BACC16.812e-1431.48Dihydroorotase OS=Bacillus cereus (strain ATCC 109... [more]
PYRC_BACAH6.812e-1431.48Dihydroorotase OS=Bacillus thuringiensis (strain A... [more]
PYRC_LISW68.897e-1431.65Dihydroorotase OS=Listeria welshimeri serovar 6b (... [more]
PYRC_LISMH8.897e-1432.28Dihydroorotase OS=Listeria monocytogenes serotype ... [more]
PYRC_BACLD8.897e-1431.48Dihydroorotase OS=Bacillus licheniformis (strain D... [more]
PYRC_LACS11.162e-1330.91Dihydroorotase OS=Lactobacillus salivarius subsp. ... [more]
PYRC_GEOSM1.162e-1335.21Dihydroorotase OS=Geobacter sp. (strain M21) GN=py... [more]
PYRC_ENTFA1.162e-1330.91Dihydroorotase OS=Enterococcus faecalis GN=pyrC PE... [more]
PYRC_LISMO1.518e-1331.65Dihydroorotase OS=Listeria monocytogenes GN=pyrC P... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-007-B08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728681 ID=EY728681; Name=EY728681; organism=Citrus sinensis; type=EST; length=869bp
CACGCGTCCGGTAAAACTCGAAGATGATACACTTGACACTCGATCTTATT
CAACATATCTGAAGACAAGGCCACCTTCATGGGAGGAAGCGGCTATCAGA
GAACTCTTGACAGTAGCAAAGGACACGAGGACAGATGGCCCTGCAGAAGG
AGCTCATCTTCACATTGTTCATTTATCTGATGCTAGTTCTTCCTTGGATC
TATTAATGGAAGCAAAAACTAATGGTGACAGCATAACTGTTGAGACATGC
CCGCACTACTTGGCTTTCTCAGCAGAGGAGATTCCTGATGGAGATACTCG
GTTCAAATGTGCTCCGCCCATACGTGATGCAGCAAATAAAGAAAAATTAT
GGGAGGCTCTGATGGATGGACACATTGATATGCTAAGCTCTGATCATTCA
CCAACCGTGCCAGAACTTAAACTCCTTGATGAAGGCAACTTTTTGAAAGC
TTGGGGTGGCATATCATCTTTGCAGTTTGTTCTTCCTGTCACGTGGTCTT
ATGGGCGGAAATATGGAGTAACTTTAGAACAGTTAGCTTCATGGTGGAGT
GAGAGACCTGCCAAGCTTGCTGGACAAGTTCAAAGGGTGCCATTGCAATT
GGAAATCATGCAGACCTAGTTGTATGGGAACTGAAGCGGAGTTTGAATTG
ACAATGNACATCCTGTACACTGGAGCATCCAGCATCTCCGCTATTGGGGA
AGAAATCTCGGGAAATCTGCCCCATAGACTAAGACGCGTGTCTCCATGTA
AACTGGCNNNNNNNNNNANGGGANNNANNNNNCCNGCNNNCTGTGNTTTC
CNTCCTCNCGACCTTACCNTCAAATTNNATAATATTTATTTCCCTTATCC
CCCCAAACCACGATCTANC
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