EY728666

Overview
NameEY728666
Unique NameEY728666
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length916
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY728666 vs. ExPASy Swiss-Prot
Match: TCTP_PEA (Translationally-controlled tumor protein homolog OS=Pisum sativum GN=TCTP PE=2 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 5.844e-44
Identity = 67/109 (61.47%), Postives = 79/109 (72.48%), Query Frame = 3 
Query:   57 MLVYQXXXXXXXXXXXXFPYKETENGILWEVEGKWVVQ*PVDVDIGANPSAEGADEDEGVDYQPVNVVDIVDTFMLLEQPAFDKKQCVTYMKRFIKLLTPSLSEERQDY 383
            MLVYQ            +PYKE ENG+LWEVEGKWVV+  VDV+IGANPSAEG  EDEGVD   V VVDIVD F L EQP FDKKQ + ++K++IKLLTP L  E+Q++
Sbjct:    1 MLVYQDLLTGDELLSDSYPYKEIENGMLWEVEGKWVVKGAVDVNIGANPSAEGG-EDEGVDDTAVKVVDIVDVFRLQEQPPFDKKQFLGFVKKYIKLLTPKLEAEKQEH 108

HSP 2 Score: 51.9878 bits (123), Expect = 5.844e-44
Identity = 24/41 (58.54%), Postives = 27/41 (65.85%), Query Frame = 2 
Query:  440 LHSIVGEIMHDDGCLVLAYYNECASDATFLYIDDASKEVNC 562
            L   VGE MHDDG LV AYY + A+D TFLY   A KE+ C
Sbjct:  127 LQFFVGESMHDDGSLVFAYYKDGAADPTFLYFSFALKEIKC 167

HSP 3 Score: 36.5798 bits (83), Expect = 5.844e-44
Identity = 16/22 (72.73%), Postives = 19/22 (86.36%), Query Frame = 1 
Query:  385 FKKNIDGATKFLLSKLIDLTFY 450
            FKKNI+GATK+LL KL DL F+
Sbjct:  109 FKKNIEGATKYLLGKLKDLQFF 130
[Close]
BLAST of EY728666 vs. ExPASy Swiss-Prot
Match: TCTP_TOBAC (Translationally-controlled tumor protein homolog OS=Nicotiana tabacum GN=TCTP PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 1.284e-43
Identity = 69/108 (63.89%), Postives = 79/108 (73.15%), Query Frame = 3 
Query:   57 MLVYQXXXXXXXXXXXXFPYKETENGILWEVEGKWVVQ*PVDVDIGANPSAEGADEDEGVDYQPVNVVDIVDTFMLLEQPAFDKKQCVTYMKRFIKLLTPSLSEERQD 380
            MLVYQ            F Y E  NG+LWEV+GKWVVQ  VDV+IGANPSAEGADEDEGVD Q + VVDIVDTF L EQP+FDKKQ V YMK++IK LTP L  E+++
Sbjct:    1 MLVYQDLLSGDELPSDSFSYTELGNGVLWEVQGKWVVQGAVDVNIGANPSAEGADEDEGVDDQAIKVVDIVDTFRLQEQPSFDKKQFVAYMKKYIKNLTPKLGAEQEE 108

HSP 2 Score: 43.1282 bits (100), Expect = 1.284e-43
Identity = 21/41 (51.22%), Postives = 25/41 (60.98%), Query Frame = 2 
Query:  440 LHSIVGEIMHDDGCLVLAYYNECASDATFLYIDDASKEVNC 562
            L   VGE M DD  +V AYY + A+D TFLY+    KEV C
Sbjct:  128 LQFFVGESMADDTGMVFAYYKDGATDPTFLYLAHGLKEVKC 168

HSP 3 Score: 36.965 bits (84), Expect = 1.284e-43
Identity = 16/23 (69.57%), Postives = 19/23 (82.61%), Query Frame = 1 
Query:  382 IFKKNIDGATKFLLSKLIDLTFY 450
            +FK NI GATK+LLSKL DL F+
Sbjct:  109 VFKNNIQGATKYLLSKLSDLQFF 131
[Close]
BLAST of EY728666 vs. ExPASy Swiss-Prot
Match: TCTP_PSEMZ (Translationally-controlled tumor protein homolog OS=Pseudotsuga menziesii GN=TCTP PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 4.782e-43
Identity = 69/107 (64.49%), Postives = 76/107 (71.03%), Query Frame = 3 
Query:   57 MLVYQXXXXXXXXXXXXFPYKETENGILWEVEGKWVVQ*PVDVDIGANPSAEGADEDEGVDYQPVNVVDIVDTFMLLEQPAFDKKQCVTYMKRFIKLLTPSLSEERQ 377
            M+VYQ            FPYKE  NG+LWEVEGKWVVQ  VDVDIGANPSAEG DE EGV  + V VVDIVDTF L EQP FDKKQ + ++KR+IK L   LSEERQ
Sbjct:    1 MIVYQDLLSGDELLSDSFPYKELYNGVLWEVEGKWVVQGAVDVDIGANPSAEGGDE-EGVKIRLVKVVDIVDTFRLQEQPPFDKKQFLGFIKRYIKNLATKLSEERQ 106

HSP 2 Score: 52.7582 bits (125), Expect = 4.782e-43
Identity = 24/41 (58.54%), Postives = 27/41 (65.85%), Query Frame = 2 
Query:  440 LHSIVGEIMHDDGCLVLAYYNECASDATFLYIDDASKEVNC 562
            L   VGE MHDDG +V AYY + A+D TFLY  D  KEV C
Sbjct:  127 LQFFVGESMHDDGSMVFAYYKDGATDPTFLYFADGLKEVKC 167

HSP 3 Score: 33.8834 bits (76), Expect = 4.782e-43
Identity = 14/22 (63.64%), Postives = 18/22 (81.82%), Query Frame = 1 
Query:  385 FKKNIDGATKFLLSKLIDLTFY 450
            FKKN++GA K L+SKL DL F+
Sbjct:  109 FKKNVEGAAKMLVSKLSDLQFF 130
[Close]
BLAST of EY728666 vs. ExPASy Swiss-Prot
Match: TCTP_MEDSA (Translationally-controlled tumor protein homolog OS=Medicago sativa GN=TCTP PE=2 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 1.368e-42
Identity = 67/108 (62.04%), Postives = 77/108 (71.30%), Query Frame = 3 
Query:   57 MLVYQXXXXXXXXXXXXFPYKETENGILWEVEGKWVVQ*PVDVDIGANPSAEGADEDEGVDYQPVNVVDIVDTFMLLEQPAFDKKQCVTYMKRFIKLLTPSLSEERQD 380
            MLVYQ            +PYKE ENG+LWEVEGKWV +  V+VDIGAN SAEG  EDEGVD   V VVDIVD F L EQPAFDKKQ + ++KR+IKLLTP L  E+Q+
Sbjct:    1 MLVYQDLLTGDELLSDSYPYKEIENGMLWEVEGKWVTKGVVEVDIGANASAEGG-EDEGVDDTAVKVVDIVDVFRLQEQPAFDKKQFLGFVKRYIKLLTPKLDAEKQE 107

HSP 2 Score: 51.2174 bits (121), Expect = 1.368e-42
Identity = 24/41 (58.54%), Postives = 27/41 (65.85%), Query Frame = 2 
Query:  440 LHSIVGEIMHDDGCLVLAYYNECASDATFLYIDDASKEVNC 562
            L   VGE MHDDG LV AYY + A+D TFLY   A KE+ C
Sbjct:  127 LQFFVGESMHDDGSLVFAYYKDGAADPTFLYFAYALKEIKC 167

HSP 3 Score: 35.039 bits (79), Expect = 1.368e-42
Identity = 15/23 (65.22%), Postives = 20/23 (86.96%), Query Frame = 1 
Query:  382 IFKKNIDGATKFLLSKLIDLTFY 450
            +FKK+I+GATK+LL KL DL F+
Sbjct:  108 LFKKHIEGATKYLLCKLKDLQFF 130
[Close]
BLAST of EY728666 vs. ExPASy Swiss-Prot
Match: TCTP_ARATH (Translationally-controlled tumor protein homolog OS=Arabidopsis thaliana GN=TCTP PE=1 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 1.889e-41
Identity = 68/107 (63.55%), Postives = 74/107 (69.16%), Query Frame = 3 
Query:   57 MLVYQXXXXXXXXXXXXFPYKETENGILWEVEGKWVVQ*PVDVDIGANPSAEGADEDEGVDYQPVNVVDIVDTFMLLEQPAFDKKQCVTYMKRFIKLLTPSLSEERQ 377
            MLVYQ            FPYKE ENGILWEVEGKWV    VDV+IGANPSAE   EDEGVD     VVDIVDTF L EQP +DKK  + Y+K++IKLLTP LSEE Q
Sbjct:    1 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVTVGAVDVNIGANPSAEEGGEDEGVDDSTQKVVDIVDTFRLQEQPTYDKKGFIAYIKKYIKLLTPKLSEEDQ 107

HSP 2 Score: 45.0542 bits (105), Expect = 1.889e-41
Identity = 21/37 (56.76%), Postives = 24/37 (64.86%), Query Frame = 2 
Query:  452 VGEIMHDDGCLVLAYYNECASDATFLYIDDASKEVNC 562
            VGE MHDD  LV AYY E +++ TFLY     KEV C
Sbjct:  132 VGEGMHDDSTLVFAYYKEGSTNPTFLYFAHGLKEVKC 168

HSP 3 Score: 33.8834 bits (76), Expect = 1.889e-41
Identity = 14/23 (60.87%), Postives = 18/23 (78.26%), Query Frame = 1 
Query:  382 IFKKNIDGATKFLLSKLIDLTFY 450
            +FKK I+GATKFLL +L D  F+
Sbjct:  109 VFKKGIEGATKFLLPRLSDFQFF 131
[Close]
BLAST of EY728666 vs. ExPASy Swiss-Prot
Match: TCTP_CUCME (Translationally-controlled tumor protein homolog OS=Cucumis melo GN=TCTP PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.543e-40
Identity = 67/108 (62.04%), Postives = 78/108 (72.22%), Query Frame = 3 
Query:   57 MLVYQXXXXXXXXXXXXFPYKETENGILWEVEGKWVVQ*PVDVDIGANPSAEGADEDEGVDYQPVNVVDIVDTFMLLEQPAFDKKQCVTYMKRFIKLLTPSLSEERQD 380
            MLVYQ            FPYKE ENG++WEVEGKWVV+  VDVDIGANPSAEG  EDEGVD Q V VVDIVDTF L EQP+ DKK  ++ +K++IK LTP L  E+Q+
Sbjct:    1 MLVYQDLVSGDELLSDSFPYKEIENGMIWEVEGKWVVKGAVDVDIGANPSAEGGGEDEGVDDQAVKVVDIVDTFRLQEQPSMDKKVFLSCIKKYIKKLTPLLQGEQQE 108

HSP 2 Score: 46.9802 bits (110), Expect = 1.543e-40
Identity = 23/41 (56.10%), Postives = 25/41 (60.98%), Query Frame = 2 
Query:  440 LHSIVGEIMHDDGCLVLAYYNECASDATFLYIDDASKEVNC 562
            L   VGE M DD  +V AYY E A+D TFLYI    KEV C
Sbjct:  128 LQFFVGESMADDSAMVFAYYKEGATDPTFLYIAPGLKEVKC 168

HSP 3 Score: 28.8758 bits (63), Expect = 1.543e-40
Identity = 12/22 (54.55%), Postives = 16/22 (72.73%), Query Frame = 1 
Query:  385 FKKNIDGATKFLLSKLIDLTFY 450
            FK  I+GA K+LL K+ DL F+
Sbjct:  110 FKNKIEGAVKYLLPKVKDLQFF 131
[Close]
BLAST of EY728666 vs. ExPASy Swiss-Prot
Match: TCTP_MAIZE (Translationally-controlled tumor protein homolog OS=Zea mays GN=TCTP PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.415e-40
Identity = 68/108 (62.96%), Postives = 74/108 (68.52%), Query Frame = 3 
Query:   57 MLVYQXXXXXXXXXXXXFPYKETENGILWEVEGKWVVQ*PVDVDIGANPSAEGADEDEGVDYQPVNVVDIVDTFMLLEQPAFDKKQCVTYMKRFIKLLTPSLSEERQD 380
            MLVYQ            F YKE ENG+LWEVEGKWV Q PVDVDIGANPSAEG  EDE VD   V VVDIVDTF L EQP FDKK  V+Y+K++IK LT  L  E+ D
Sbjct:    1 MLVYQDLLSGDELLSDSFTYKELENGVLWEVEGKWVTQGPVDVDIGANPSAEGG-EDESVDDTAVKVVDIVDTFRLQEQPPFDKKSFVSYIKKYIKNLTAVLEPEKAD 107

HSP 2 Score: 41.5874 bits (96), Expect = 4.415e-40
Identity = 18/41 (43.90%), Postives = 24/41 (58.54%), Query Frame = 2 
Query:  440 LHSIVGEIMHDDGCLVLAYYNECASDATFLYIDDASKEVNC 562
            L   VGE M DD  +  AYY + A+++TFLY     KE+ C
Sbjct:  127 LQFFVGESMKDDASVAFAYYKDGATNSTFLYFSHGLKEIKC 167

HSP 3 Score: 36.5798 bits (83), Expect = 4.415e-40
Identity = 16/22 (72.73%), Postives = 19/22 (86.36%), Query Frame = 1 
Query:  385 FKKNIDGATKFLLSKLIDLTFY 450
            FKK ++GATKFLLSKL DL F+
Sbjct:  109 FKKGVEGATKFLLSKLKDLQFF 130
[Close]
BLAST of EY728666 vs. ExPASy Swiss-Prot
Match: TCTP_BRAOL (Translationally-controlled tumor protein homolog OS=Brassica oleracea GN=TCTP PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.130e-39
Identity = 63/108 (58.33%), Postives = 74/108 (68.52%), Query Frame = 3 
Query:   57 MLVYQXXXXXXXXXXXXFPYKETENGILWEVEGKWVVQ*PVDVDIGANPSAEGADEDEGVDYQPVNVVDIVDTFMLLEQPAFDKKQCVTYMKRFIKLLTPSLSEERQD 380
            MLVY             FPYKE ENGILWEVEGKW  +  V+V+IGANPSAE   EDEGVD     VVDIVDTF L EQP +DKK  + Y+K++IKLLTP L+ E+Q+
Sbjct:    1 MLVYTDLLTGDELLSDSFPYKEIENGILWEVEGKWTTKGCVEVNIGANPSAEEGGEDEGVDDSVEKVVDIVDTFRLQEQPTYDKKGFIAYIKKYIKLLTPKLTPEQQE 108

HSP 2 Score: 45.4394 bits (106), Expect = 2.130e-39
Identity = 21/37 (56.76%), Postives = 24/37 (64.86%), Query Frame = 2 
Query:  452 VGEIMHDDGCLVLAYYNECASDATFLYIDDASKEVNC 562
            VGE MHDD  +V AYY E A++ TFLY     KEV C
Sbjct:  132 VGEGMHDDSTIVFAYYKEGATNPTFLYFAHGLKEVKC 168

HSP 3 Score: 33.4982 bits (75), Expect = 2.130e-39
Identity = 15/22 (68.18%), Postives = 17/22 (77.27%), Query Frame = 1 
Query:  385 FKKNIDGATKFLLSKLIDLTFY 450
            FKK I+GATKFLL KL D  F+
Sbjct:  110 FKKGIEGATKFLLPKLKDFQFF 131
The following BLAST results are available for this feature:
BLAST of EY728666 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
TCTP_PEA5.844e-4461.47Translationally-controlled tumor protein homolog O... [more]
TCTP_TOBAC1.284e-4363.89Translationally-controlled tumor protein homolog O... [more]
TCTP_PSEMZ4.782e-4364.49Translationally-controlled tumor protein homolog O... [more]
TCTP_MEDSA1.368e-4262.04Translationally-controlled tumor protein homolog O... [more]
TCTP_ARATH1.889e-4163.55Translationally-controlled tumor protein homolog O... [more]
TCTP_CUCME1.543e-4062.04Translationally-controlled tumor protein homolog O... [more]
TCTP_MAIZE4.415e-4062.96Translationally-controlled tumor protein homolog O... [more]
TCTP_BRAOL2.130e-3958.33Translationally-controlled tumor protein homolog O... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-006-H10-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728666 ID=EY728666; Name=EY728666; organism=Citrus sinensis; type=EST; length=916bp
CCACGCGTCCGGTTGATTATTTTTCTTTTCTGTGTTCGCGGAGAGAGACT
GCCATCATGTTGGTCTATCAAGATCTCCTCAGCGGTGATGAGCTTCTCTC
CGACTCTTTTCCCTACAAGGAAACTGAGAATGGGATTCTGTGGGAAGTTG
AAGGAAAGTGGGTTGTACAATGACCCGTTGATGTTGACATTGGTGCAAAT
CCTTCTGCCGAAGGAGCTGATGAGGATGAGGGTGTTGATTATCAACCCGT
GAATGTGGTCGACATTGTCGACACATTCATGCTGCTTGAGCAACCTGCTT
TTGACAAGAAGCAGTGTGTAACATACATGAAGAGATTCATCAAGTTGCTG
ACGCCCAGTCTGAGTGAGGAGAGGCAGGACTATATTTAAGAAGAATATTG
ATGGAGCGACCAAGTTCTTGCTCTCGAAACTCATTGACCTTACATTCTAT
TGTTGGGGAGATCATGCATGATGATGGCTGTCTTGTCTTAGCGTACTACA
ACGAATGTGCGAGCGATGCCACATTTTTGTATATTGATGATGCTTCGAAG
GAGGTGAATTGCTAAGCCGGGCTTCGTAACATGAGATGGTGCTATAGTGG
TAGTGGCAATTATGGCCCTGCGCGTATCTGCATGTATCTTGGGGTACAGG
TTACTCGGGAAATGTGCTTGCAGTTTCTCAGCTTGTATTTTGGGCTCCAC
ACTAGGTTGACCTGTCCCCGATCTCCGGTTCCCTGTCTCGCCAACACATC
TGCGGGTATGTGTGGGGCGTGGTGACCGGAGGCTTTGAGGTGGGTCCTCA
TCTGGCGGAGCGGTGATACGTCGGCTTTCCGCCCGACCCCGACTCATTGC
CGTACATCTCACTACACCCTCGCTCGTCCGGAGCCGGGCGCCCCGCTCTC
GGTCGTCGAGGGGTGA
back to top