EY728660

Overview
NameEY728660
Unique NameEY728660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length910
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728660 vs. ExPASy Swiss-Prot
Match: GLGC_CYAP8 (Glucose-1-phosphate adenylyltransferase OS=Cyanothece sp. (strain PCC 8801) GN=glgC PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 7.312e-38
Identity = 90/168 (53.57%), Postives = 113/168 (67.26%), Query Frame = 1
Query:  364 LYL*GGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGG*QNEGLVEVLGCQRSPENPNGFQGTADAVRQYLWVVEGHNGLGMPGVGGERLVRRDFEK*CRR-QEKRSGFQEVWLAREEKRASGLGVLRLMTKGR 864
            + L GGAGTRLYPLTK RAKPAVPL   YRLIDIP+SNC+NS I KIYVLTQFNSASLNRHL+R Y  N  G  ++G VEVL  Q++ ENP  FQGTADAVRQYLW  +  +      + G+ L R D+    +R +E  +      +  +E+RAS  G++++   GR
Sbjct:    7 IILGGGAGTRLYPLTKLRAKPAVPLAGKYRLIDIPLSNCINSEILKIYVLTQFNSASLNRHLTRTY--NFTG-FSDGFVEVLAAQQTAENPKWFQGTADAVRQYLWAFQEWDIDEYLILSGDHLYRMDYRDFIQRHRETGADITLSVVPIDEERASSFGLMKIDDHGR 171          
BLAST of EY728660 vs. ExPASy Swiss-Prot
Match: GLGC_SYNPW (Glucose-1-phosphate adenylyltransferase OS=Synechococcus sp. (strain WH7803) GN=glgC PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 4.740e-37
Identity = 85/168 (50.60%), Postives = 110/168 (65.48%), Query Frame = 1
Query:  364 LYL*GGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGG*QNEGLVEVLGCQRSPENPNGFQGTADAVRQYLWVVEGHNGLGMPGVGGERLVRRDFEK*CRRQEKRSGFQEV-WLAREEKRASGLGVLRLMTKGR 864
            + L GGAGTRLYPLTK RAKPAVPL   YRLIDIP+SNC+NSNI+K+YVLTQFNSASLNRHLS+ Y  N+     +G VEVL  Q++PE+P+ F+GTADAVR+Y W+ +  +      + G++L R D+               V  L  + K+A   G++R    GR
Sbjct:    7 IILGGGAGTRLYPLTKMRAKPAVPLAGKYRLIDIPISNCINSNINKMYVLTQFNSASLNRHLSQTY--NLSAGFGQGFVEVLAAQQTPESPSWFEGTADAVRKYQWLFQEWDVDEYLILSGDQLYRMDYSLFINHHRSTGADLTVAALPVDAKQAEAFGLMRTDEDGR 172          
BLAST of EY728660 vs. ExPASy Swiss-Prot
Match: GLGL1_ARATH (Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic OS=Arabidopsis thaliana GN=ADG2 PE=1 SV=3)

HSP 1 Score: 148.288 bits (373), Expect = 5.794e-35
Identity = 84/175 (48.00%), Postives = 116/175 (66.29%), Query Frame = 1
Query:  364 LYL*GGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGG*QNEGLVEVLGCQRSP--ENPNGFQGTADAVRQYLWVVEGHNGLGMPGV---GGERLVRRDFEK*CRRQEKRSGFQEVWLA---REEKRASGLGVLRLMTKGR 864
            + L GGAGTRL+PLTK+RAKPAVP+G  YRLID+P+SNC+NS I+K+Y+LTQ+NSASLNRHL+RAY SN  G   +G VEVL   ++P       FQGTADAVRQ+ W+ E      +  V    G+ L R D+      Q+ R    ++ ++    +++RAS  G++++  KGR
Sbjct:   93 IILGGGAGTRLFPLTKRRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNSNGLG-FGDGYVEVLAATQTPGESGKRWFQGTADAVRQFHWLFEDARSKDIEDVLILSGDHLYRMDYMDFI--QDHRQSGADISISCIPIDDRRASDFGLMKIDDKGR 264          
BLAST of EY728660 vs. ExPASy Swiss-Prot
Match: GLGL2_ARATH (Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic OS=Arabidopsis thaliana GN=APL2 PE=2 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 8.366e-34
Identity = 83/173 (47.98%), Postives = 106/173 (61.27%), Query Frame = 1
Query:  364 LYL*GGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGG*QNEGLVEVLGCQRS--PENPNGFQGTADAVRQYLWVVEGHNGLGMPGV---GGERLVRRDFEK*CRRQ-EKRSGFQEVWLAREEKRASGLGVLRLMTKGR 864
            + L GGAGTRL+PLT KRAKPAVP+G  YRLIDIP+SNC+NS I KI++LTQFNS SLNRHLSR Y    G    +G VEVL   ++        FQGTADAVRQ++WV E      +  V    G+ L R D+    ++  E  +      L  +E RAS  G+L++   G+
Sbjct:   88 IILGGGAGTRLFPLTSKRAKPAVPIGGCYRLIDIPMSNCINSGIRKIFILTQFNSFSLNRHLSRTYNFGNGVNFGDGFVEVLAATQTSGDAGKKWFQGTADAVRQFIWVFEDAKTKNVEHVLILSGDHLYRMDYMNFVQKHIESNADITVSCLPMDESRASDFGLLKIDQSGK 260          
BLAST of EY728660 vs. ExPASy Swiss-Prot
Match: GLGL3_SOLTU (Glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic/amyloplastic OS=Solanum tuberosum GN=AGPS3 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.208e-32
Identity = 80/175 (45.71%), Postives = 109/175 (62.29%), Query Frame = 1
Query:  364 LYL*GGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGG*QNEGLVEVLGCQRSPE--NPNGFQGTADAVRQYLWVVEGHNGLGMPGV---GGERLVRRDFEK*CRRQEKRSGFQEVWLAR---EEKRASGLGVLRLMTKGR 864
            + L GGAGTRL+PLTK+RAKPAVP+G  YRLID+P+SNC+NS I+K+Y+LTQFNSASLNRH++RAY    G     G VEVL   ++P       FQGTA AVRQ+ W+ E      +  V    G+ L R D+      Q  R    ++ ++    ++ RAS  G++++   GR
Sbjct:   52 IILGGGAGTRLFPLTKRRAKPAVPMGGAYRLIDVPMSNCINSGINKVYILTQFNSASLNRHIARAYNFGNGVTFESGYVEVLAATQTPGELGKRWFQGTAHAVRQFHWLFEDARSKDIEDVLILSGDHLYRMDYLHFV--QSHRQSGADITISSLPIDDSRASDFGLMKIDDTGR 224          
BLAST of EY728660 vs. ExPASy Swiss-Prot
Match: GLGL1_BETVU (Glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplastic OS=Beta vulgaris GN=AGPS1 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.744e-31
Identity = 75/173 (43.35%), Postives = 104/173 (60.12%), Query Frame = 1
Query:  364 LYL*GGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGG*QNEGLVEVLGCQRSP--ENPNGFQGTADAVRQYLWVVEGHNGLGMPGV---GGERLVRRDFEK*CRRQ-EKRSGFQEVWLAREEKRASGLGVLRLMTKGR 864
            + L GGAGTRL+PLT +RAKPAVP+G  YRLID+P+SNC+NS I KI++LTQFNS SLNRHL+R Y    G    +G VEV    ++P       FQGTADAVRQ+ W  E      +  +    G+ L R D+    ++  +  +      +  ++ RAS  G++++   GR
Sbjct:   92 IVLGGGAGTRLFPLTSRRAKPAVPIGGCYRLIDVPMSNCINSGIRKIFILTQFNSFSLNRHLARTYNFGDGVNFGDGFVEVFAATQTPGESGKKWFQGTADAVRQFFWAFEDSKSKDVEHIVILSGDHLYRMDYMSFWQKHIDTNADITVSCIPMDDSRASDYGLMKIDHTGR 264          
BLAST of EY728660 vs. ExPASy Swiss-Prot
Match: GLGL1_SOLTU (Glucose-1-phosphate adenylyltransferase large subunit 1 (Fragment) OS=Solanum tuberosum GN=AGPS1 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.477e-30
Identity = 75/169 (44.38%), Postives = 107/169 (63.31%), Query Frame = 1
Query:  376 GGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGG*QNEGLVEVLGCQRSP--ENPNGFQGTADAVRQYLWVVEGHNGLGMPGV---GGERLVRRDFEK*CRRQEKRSGFQEVWLA-REEKRASGLGVLRLMTKGR 864
            GG GT+L+PLT + A PAVP+G  YRLIDIP+SNC+NS I+KI+VLTQ+NSA LNRH++R Y  N G    +G VEVL   ++P       FQGTADAVR+++WV E      +  +    G+ L R D+ +  +    R+    +  A  E+ RAS  G++++ ++GR
Sbjct:   45 GGEGTKLFPLTSRTATPAVPVGGCYRLIDIPMSNCINSAINKIFVLTQYNSAPLNRHIARTYFGN-GVSFGDGFVEVLAATQTPGEAGKKWFQGTADAVRKFIWVFEDAKNKNIENIVVLSGDHLYRMDYMELVQNHIDRNADITLSCAPAEDSRASDFGLVKIDSRGR 212          
BLAST of EY728660 vs. ExPASy Swiss-Prot
Match: GLGL3_ARATH (Glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic OS=Arabidopsis thaliana GN=APL3 PE=2 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 2.785e-29
Identity = 76/173 (43.93%), Postives = 105/173 (60.69%), Query Frame = 1
Query:  364 LYL*GGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGG*QNEGLVEVLGCQRSP--ENPNGFQGTADAVRQYLWVVEGHNGLGMPGV---GGERLVRRDFEK*CRRQ-EKRSGFQEVWLAREEKRASGLGVLRLMTKGR 864
            + L GG G +L+PLTK+ A PAVP+G  YR+IDIP+SNC+NS I+KI+VLTQFNSASLNRHL+R Y  N G    +G VEVL   ++P       FQGTADAVR++LWV E      +  +    G+ L R ++    +   + ++         +E RAS  G++ +   GR
Sbjct:   92 IILGGGDGAKLFPLTKRAATPAVPVGGCYRMIDIPMSNCINSCINKIFVLTQFNSASLNRHLARTYFGN-GINFGDGFVEVLAATQTPGEAGKKWFQGTADAVRKFLWVFEDAKNRNIENIIILSGDHLYRMNYMDFVQHHVDSKADITLSCAPVDESRASEYGLVNIDRSGR 263          
BLAST of EY728660 vs. ExPASy Swiss-Prot
Match: GLGL2_MAIZE (Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic/amyloplastic OS=Zea mays GN=AGP2 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.785e-29
Identity = 78/171 (45.61%), Postives = 108/171 (63.16%), Query Frame = 1
Query:  376 GGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGG*QN--EGLVEVLGCQRSPENPNG-FQGTADAVRQYLWVVEG---HNGL-GMPGVGGERLVRRDFEK*CRRQ-EKRSGFQEVWLAREEKRASGLGVLRLMTKGR 864
            GG GT+L+PLT  RA PAVP+G  YRLIDIP+SNC NS I+KI+V+TQFNSASLNRH+ R Y   +GG  N  +G VEVL   + P    G FQGTADAVR+++WV+E    H  +  +  + G++L R D+ +  ++  +  +          E RAS  G+++  + GR
Sbjct:   94 GGTGTQLFPLTSTRATPAVPIGGCYRLIDIPMSNCFNSGINKIFVMTQFNSASLNRHIHRTY---LGGGINFTDGSVEVLAATQMPGEAAGWFQGTADAVRKFIWVLEDYYKHKAIEHILILSGDQLYRMDYMELVQKHVDDNADITLSCAPVGESRASDYGLVKFDSSGR 261          
BLAST of EY728660 vs. ExPASy Swiss-Prot
Match: GLGL1_HORVU (Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic/amyloplastic OS=Hordeum vulgare PE=2 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 1.058e-28
Identity = 77/171 (45.03%), Postives = 108/171 (63.16%), Query Frame = 1
Query:  376 GGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGG*QN--EGLVEVLGCQRSPENPNG-FQGTADAVRQYLWVVEG---HNGL-GMPGVGGERLVRRDFEK*CRRQ-EKRSGFQEVWLAREEKRASGLGVLRLMTKGR 864
            GG GT+L+PLT  RA PAVP+G  YRLIDIP+SNC NS I+KI+V+TQFNSASLNRH+ R Y   +GG  N  +G VEVL   + P    G F+GTADAVR+++WV+E    H  +  +  + G++L R D+ +  ++  +  +          E RAS  G+++  + GR
Sbjct:   98 GGTGTQLFPLTSTRATPAVPIGGCYRLIDIPMSNCFNSGINKIFVMTQFNSASLNRHIHRTY---LGGGINFTDGSVEVLAATQMPGEAAGWFRGTADAVRKFIWVLEDYYKHKSIEHILILSGDQLYRMDYMELVQKHVDDNADITLSCAPVGESRASEYGLVKFDSSGR 265          
The following BLAST results are available for this feature:
BLAST of EY728660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 305
Match NameE-valueIdentityDescription
GLGC_CYAP87.312e-3853.57Glucose-1-phosphate adenylyltransferase OS=Cyanoth... [more]
GLGC_SYNPW4.740e-3750.60Glucose-1-phosphate adenylyltransferase OS=Synecho... [more]
GLGL1_ARATH5.794e-3548.00Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGL2_ARATH8.366e-3447.98Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGL3_SOLTU1.208e-3245.71Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGL1_BETVU1.744e-3143.35Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGL1_SOLTU1.477e-3044.38Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGL3_ARATH2.785e-2943.93Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGL2_MAIZE2.785e-2945.61Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGL1_HORVU1.058e-2845.03Glucose-1-phosphate adenylyltransferase large subu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-006-H01-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728660 ID=EY728660; Name=EY728660; organism=Citrus sinensis; type=EST; length=910bp
CCACGCGTCCGCCCATGCGTCCGCACACTCACTCAGGCTCAGCTCGCTTA
ACGATTACTGTTAACGTTAACAGATTGTACCGATTAATGGCGAGTATGGC
GTCGATCGGATCGCTCAAAGTTCCGTCATCTCCGTCAACTGCAGCAACGT
CGTCTAACTCCAACAATCACAGCCGCAGGAGTGTGGTTAAACGACTGGCG
TTCTCGTCGTCTCAGCTCTCCGGTGACAAGATTTTTTCTAAAGCTGTCAC
CGGTGATCGGCGAAGGGAGAGGCGTCCGATCGTTGTGTCTCCTCAAGCGG
TGTCGGATTCGAAAAATTCGCAGACTTGCCTTGATCCTGAAGCCAGTCGA
AGTGTTTTGGGGATTATACTTGTGAGGTGGAGCAGGGACTCGCTTGTATC
CACTTACGAAGAAGAGGGCGAAGCCTGCTGTTCCATTGGGAGCTAATTAC
AGGCTGATTGATATTCCTGTGAGCAATTGTTTGAATAGTAACATTTCAAA
GATCTATGTTCTCACTCAGTTCAATTCTGCGTCCCTGAATCGTCACCTAT
CGAGGGCGTATGCTAGCAACATGGGTGGTTGACAGAACGAAGGATTGGTT
GAAGTTCTTGGCTGCCAGCGGAGTCCAGAGAATCCCAATGGGTTTCAGGG
TACAGCTGATGCTGTGAGGCAGTATTTGTGGGTGGTTGAGGGACACAATG
GTCTGGGAATGCCCGGTGTGGGTGGTGAACGTTTGGTGCGAAGGGACTTT
GAAAAATGATGCAGGCGGCAAGAGAAACGATCCGGGTTTCAAGAAGTCTG
GCTGGCCAGGGAAGAAAAGAGGGCCAGTGGCTTGGGGGTGCTGAGGTTGA
TGACTAAGGGGCGGGGTGCAGTTGGTGTGGAACCGCGGGGGGGCCGGTGG
GAGAGGGAGG
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