EY728660

Overview
NameEY728660
Unique NameEY728660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length910
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728660 vs. ExPASy Swiss-Prot
Match: GLGC_THET8 (Glucose-1-phosphate adenylyltransferase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=glgC PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.602e-19
Identity = 58/135 (42.96%), Postives = 80/135 (59.26%), Query Frame = 1
Query:  346 VEVFWGLYL*GGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGG*QNEGLVEVLGCQ--RSPE-NPNGFQGTADAVRQYLWVVEGHNGLGMPGVGGERLVR 741
            VEV  G+ L GG G+RLYPLT KRAKPAVP GA YR+ID  ++N +NS I  IYVLTQ+ + SL  H+ R +    G    +  + ++  Q  R  E  P  ++GTADA+ Q L +V  H    +   GG+ + +
Sbjct:    4 VEVL-GMILAGGQGSRLYPLTAKRAKPAVPFGAKYRIIDFVLNNFVNSGIYAIYVLTQYKAQSLTEHIQRYW--RFGAFLEDHFILLVPAQMYRYEELGPVWYRGTADAIYQNLHLVHNHAPKAVAVFGGDHIFK 135          
BLAST of EY728660 vs. ExPASy Swiss-Prot
Match: GLGC_THET2 (Glucose-1-phosphate adenylyltransferase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=glgC PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.602e-19
Identity = 58/135 (42.96%), Postives = 80/135 (59.26%), Query Frame = 1
Query:  346 VEVFWGLYL*GGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGG*QNEGLVEVLGCQ--RSPE-NPNGFQGTADAVRQYLWVVEGHNGLGMPGVGGERLVR 741
            VEV  G+ L GG G+RLYPLT KRAKPAVP GA YR+ID  ++N +NS I  IYVLTQ+ + SL  H+ R +    G    +  + ++  Q  R  E  P  ++GTADA+ Q L +V  H    +   GG+ + +
Sbjct:    4 VEVL-GMILAGGQGSRLYPLTAKRAKPAVPFGAKYRIIDFVLNNFVNSGIYAIYVLTQYKAQSLTEHIQRYW--RFGAFLEDHFILLVPAQMYRYEELGPVWYRGTADAIYQNLHLVHNHAPKAVAVFGGDHIFK 135          
BLAST of EY728660 vs. ExPASy Swiss-Prot
Match: GLGC_THECA (Glucose-1-phosphate adenylyltransferase OS=Thermus caldophilus GN=glgC PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.602e-19
Identity = 58/135 (42.96%), Postives = 80/135 (59.26%), Query Frame = 1
Query:  346 VEVFWGLYL*GGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGG*QNEGLVEVLGCQ--RSPE-NPNGFQGTADAVRQYLWVVEGHNGLGMPGVGGERLVR 741
            VEV  G+ L GG G+RLYPLT KRAKPAVP GA YR+ID  ++N +NS I  IYVLTQ+ + SL  H+ R +    G    +  + ++  Q  R  E  P  ++GTADA+ Q L +V  H    +   GG+ + +
Sbjct:    4 VEVL-GMILAGGQGSRLYPLTAKRAKPAVPFGAKYRIIDFVLNNFVNSGIYAIYVLTQYKAQSLTEHIQRYW--RFGAFLEDHFILLVPAQMYRYEELGPVWYRGTADAIYQNLHLVHNHAPKAVAVFGGDHIFK 135          
BLAST of EY728660 vs. ExPASy Swiss-Prot
Match: GLGC_NITMU (Glucose-1-phosphate adenylyltransferase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=glgC PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.602e-19
Identity = 61/168 (36.31%), Postives = 92/168 (54.76%), Query Frame = 1
Query:  364 LYL*GGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGG*QNEGLVEVLGCQRSPENPNGFQGTADAVRQYLWVVEGHNGLGMPGVGGERLVRRDFEK*CRRQEKRSGFQEV-WLAREEKRASGLGVLRLMTKGR 864
            + L GG GTRL  LT  RAKPAVP G  +R+ID P+SNC+NS I +I V TQ+ + SL  H+ + +    G  Q    +E+L  Q+  E  + +QGTADAV Q + ++  HN   +  +GG+ + + D+ K       +S    +  +    + AS  GV+ +   GR
Sbjct:   20 MILAGGRGTRLRQLTDWRAKPAVPFGGKFRIIDFPLSNCVNSGIRRIGVATQYKAQSLISHIQQGWGFLDGRFQE--FIELLPAQQRTEE-SWYQGTADAVYQNIDILRSHNPDYVLILGGDHVYKMDYAKLLADHIAKSAEMTIACIDLPLEEASAFGVMSVTKDGR 184          
BLAST of EY728660 vs. ExPASy Swiss-Prot
Match: GLGC_RHOBA (Glucose-1-phosphate adenylyltransferase OS=Rhodopirellula baltica GN=glgC PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.297e-18
Identity = 58/164 (35.37%), Postives = 93/164 (56.71%), Query Frame = 1
Query:  376 GGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGG*QNEGLVEVLGCQRSPENPNGFQGTADAVRQYLWVVEGHNGLGMPGVGGERLVRRDFEK*CRRQEKRSGFQEVWLAR-EEKRASGLGVLRLMTKGR 864
            GG G+RL PLT+ RAKPAVP+G  YR+ID  +SNCLNS++ ++ +LTQ+ + SL+RH++ A+ +       E +  V   QR  +  N +QGTADAV Q ++ +E      +  + G+ L + ++E       ++     V   R   + A   GV+++ T  R
Sbjct:   32 GGRGSRLEPLTRDRAKPAVPIGGAYRIIDFVLSNCLNSDMRRLLLLTQYKAQSLDRHINVAWRNYFCRELGEFIDVVPPQQRIDD--NWYQGTADAVYQNIYAIEREAPEYVVILAGDHLYKMNYESMVNFHHRKGADVTVGALRVSREEARQFGVMQVDTDNR 193          
BLAST of EY728660 vs. ExPASy Swiss-Prot
Match: GLGC_SALAR (Glucose-1-phosphate adenylyltransferase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=glgC PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.694e-18
Identity = 53/131 (40.46%), Postives = 80/131 (61.07%), Query Frame = 1
Query:  364 LYL*GGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGG*QNEGLVEVLGCQRSPENPNGFQGTADAVRQYLWVVEGHNGLGMPGVGGERLVRRDFEK 756
            L L GG GTRL  LT KRAKPAV  G  +R+ID  +SNCLNS I +I V+TQ+ S +L +H+ R + S      NE  V++L  Q+  +  N ++GTADAV Q L ++  +    +  + G+ + ++D+ +
Sbjct:   23 LILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCLNSGIRRIGVITQYQSHTLVQHIQRGW-SLFSEEMNE-FVDLLPAQQRMQGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSR 151          
BLAST of EY728660 vs. ExPASy Swiss-Prot
Match: GLGC_FRATW (Glucose-1-phosphate adenylyltransferase OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=glgC PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.694e-18
Identity = 61/161 (37.89%), Postives = 94/161 (58.39%), Query Frame = 1
Query:  364 LYL*GGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGG*QNEGLVEVLGCQRSPENPNGFQGTADAVRQYLWVVEGHNGLGMPGVGGERLVRRDFEK*CRRQEKRSGFQ----EVWLAREEKRASGL 834
            L L GG G+RLY LT  RAKPAV  G  +R+ID  +SNCLNS I +I V+TQ+ S SL RHL R +   + G  NE  +++L  Q+  +  + ++GTADAV Q + ++  +    +  + G+ + + D+     R   +SG++     V +A+EE  A G+
Sbjct:   17 LVLAGGRGSRLYNLTDTRAKPAVYFGGKFRIIDFALSNCLNSGIRRIGVVTQYKSHSLLRHLQRGWGF-LRGELNE-FIDLLPAQQRVDEEHWYRGTADAVYQNIDILRSYGPEYVIVLAGDHIYKMDYSI-MLRDHAQSGYKCTVGCVEIAKEEAYAFGI 174          
BLAST of EY728660 vs. ExPASy Swiss-Prot
Match: GLGC_FRATO (Glucose-1-phosphate adenylyltransferase OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=glgC PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.694e-18
Identity = 61/161 (37.89%), Postives = 94/161 (58.39%), Query Frame = 1
Query:  364 LYL*GGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGG*QNEGLVEVLGCQRSPENPNGFQGTADAVRQYLWVVEGHNGLGMPGVGGERLVRRDFEK*CRRQEKRSGFQ----EVWLAREEKRASGL 834
            L L GG G+RLY LT  RAKPAV  G  +R+ID  +SNCLNS I +I V+TQ+ S SL RHL R +   + G  NE  +++L  Q+  +  + ++GTADAV Q + ++  +    +  + G+ + + D+     R   +SG++     V +A+EE  A G+
Sbjct:   17 LVLAGGRGSRLYNLTDTRAKPAVYFGGKFRIIDFALSNCLNSGIRRIGVVTQYKSHSLLRHLQRGWGF-LRGELNE-FIDLLPAQQRVDEEHWYRGTADAVYQNIDILRSYGPEYVIVLAGDHIYKMDYSI-MLRDHAQSGYKCTVGCVEIAKEEAYAFGI 174          
BLAST of EY728660 vs. ExPASy Swiss-Prot
Match: GLGC_FRATN (Glucose-1-phosphate adenylyltransferase OS=Francisella tularensis subsp. novicida (strain U112) GN=glgC PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.694e-18
Identity = 61/161 (37.89%), Postives = 94/161 (58.39%), Query Frame = 1
Query:  364 LYL*GGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGG*QNEGLVEVLGCQRSPENPNGFQGTADAVRQYLWVVEGHNGLGMPGVGGERLVRRDFEK*CRRQEKRSGFQ----EVWLAREEKRASGL 834
            L L GG G+RLY LT  RAKPAV  G  +R+ID  +SNCLNS I +I V+TQ+ S SL RHL R +   + G  NE  +++L  Q+  +  + ++GTADAV Q + ++  +    +  + G+ + + D+     R   +SG++     V +A+EE  A G+
Sbjct:   17 LVLAGGRGSRLYNLTDTRAKPAVYFGGKFRIIDFALSNCLNSGIRRIGVVTQYKSHSLLRHLQRGWGF-LRGELNE-FIDLLPAQQRVDEEHWYRGTADAVYQNIDILRSYGPEYVIVLAGDHIYKMDYSI-MLRDHAQSGYKCTVGCVEIAKEEAYAFGI 174          
BLAST of EY728660 vs. ExPASy Swiss-Prot
Match: GLGC_FRATH (Glucose-1-phosphate adenylyltransferase OS=Francisella tularensis subsp. holarctica (strain LVS) GN=glgC PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.694e-18
Identity = 61/161 (37.89%), Postives = 94/161 (58.39%), Query Frame = 1
Query:  364 LYL*GGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGG*QNEGLVEVLGCQRSPENPNGFQGTADAVRQYLWVVEGHNGLGMPGVGGERLVRRDFEK*CRRQEKRSGFQ----EVWLAREEKRASGL 834
            L L GG G+RLY LT  RAKPAV  G  +R+ID  +SNCLNS I +I V+TQ+ S SL RHL R +   + G  NE  +++L  Q+  +  + ++GTADAV Q + ++  +    +  + G+ + + D+     R   +SG++     V +A+EE  A G+
Sbjct:   17 LVLAGGRGSRLYNLTDTRAKPAVYFGGKFRIIDFALSNCLNSGIRRIGVVTQYKSHSLLRHLQRGWGF-LRGELNE-FIDLLPAQQRVDEEHWYRGTADAVYQNIDILRSYGPEYVIVLAGDHIYKMDYSI-MLRDHAQSGYKCTVGCVEIAKEEAYAFGI 174          
The following BLAST results are available for this feature:
BLAST of EY728660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 305
Match NameE-valueIdentityDescription
GLGC_THET87.602e-1942.96Glucose-1-phosphate adenylyltransferase OS=Thermus... [more]
GLGC_THET27.602e-1942.96Glucose-1-phosphate adenylyltransferase OS=Thermus... [more]
GLGC_THECA7.602e-1942.96Glucose-1-phosphate adenylyltransferase OS=Thermus... [more]
GLGC_NITMU7.602e-1936.31Glucose-1-phosphate adenylyltransferase OS=Nitroso... [more]
GLGC_RHOBA1.297e-1835.37Glucose-1-phosphate adenylyltransferase OS=Rhodopi... [more]
GLGC_SALAR1.694e-1840.46Glucose-1-phosphate adenylyltransferase OS=Salmone... [more]
GLGC_FRATW1.694e-1837.89Glucose-1-phosphate adenylyltransferase OS=Francis... [more]
GLGC_FRATO1.694e-1837.89Glucose-1-phosphate adenylyltransferase OS=Francis... [more]
GLGC_FRATN1.694e-1837.89Glucose-1-phosphate adenylyltransferase OS=Francis... [more]
GLGC_FRATH1.694e-1837.89Glucose-1-phosphate adenylyltransferase OS=Francis... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-006-H01-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728660 ID=EY728660; Name=EY728660; organism=Citrus sinensis; type=EST; length=910bp
CCACGCGTCCGCCCATGCGTCCGCACACTCACTCAGGCTCAGCTCGCTTA
ACGATTACTGTTAACGTTAACAGATTGTACCGATTAATGGCGAGTATGGC
GTCGATCGGATCGCTCAAAGTTCCGTCATCTCCGTCAACTGCAGCAACGT
CGTCTAACTCCAACAATCACAGCCGCAGGAGTGTGGTTAAACGACTGGCG
TTCTCGTCGTCTCAGCTCTCCGGTGACAAGATTTTTTCTAAAGCTGTCAC
CGGTGATCGGCGAAGGGAGAGGCGTCCGATCGTTGTGTCTCCTCAAGCGG
TGTCGGATTCGAAAAATTCGCAGACTTGCCTTGATCCTGAAGCCAGTCGA
AGTGTTTTGGGGATTATACTTGTGAGGTGGAGCAGGGACTCGCTTGTATC
CACTTACGAAGAAGAGGGCGAAGCCTGCTGTTCCATTGGGAGCTAATTAC
AGGCTGATTGATATTCCTGTGAGCAATTGTTTGAATAGTAACATTTCAAA
GATCTATGTTCTCACTCAGTTCAATTCTGCGTCCCTGAATCGTCACCTAT
CGAGGGCGTATGCTAGCAACATGGGTGGTTGACAGAACGAAGGATTGGTT
GAAGTTCTTGGCTGCCAGCGGAGTCCAGAGAATCCCAATGGGTTTCAGGG
TACAGCTGATGCTGTGAGGCAGTATTTGTGGGTGGTTGAGGGACACAATG
GTCTGGGAATGCCCGGTGTGGGTGGTGAACGTTTGGTGCGAAGGGACTTT
GAAAAATGATGCAGGCGGCAAGAGAAACGATCCGGGTTTCAAGAAGTCTG
GCTGGCCAGGGAAGAAAAGAGGGCCAGTGGCTTGGGGGTGCTGAGGTTGA
TGACTAAGGGGCGGGGTGCAGTTGGTGTGGAACCGCGGGGGGGCCGGTGG
GAGAGGGAGG
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