EY728660

Overview
NameEY728660
Unique NameEY728660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length910
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY728660 vs. ExPASy Swiss-Prot
Match: GLGC_ECOLU (Glucose-1-phosphate adenylyltransferase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=glgC PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.405e-18
Identity = 51/131 (38.93%), Postives = 80/131 (61.07%), Query Frame = 1 
Query:  364 LYL*GGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGG*QNEGLVEVLGCQRSPENPNGFQGTADAVRQYLWVVEGHNGLGMPGVGGERLVRRDFEK 756
            L L GG GTRL  LT KRAKPAV  G  +R+ID  +SNC+NS I ++ V+TQ+ S +L +H+ R + S      NE  V++L  Q+  +  N ++GTADAV Q L ++  +    +  + G+ + ++D+ +
Sbjct:   23 LILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCINSGIRRMGVITQYQSHTLVQHIQRGW-SFFNEEMNE-FVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSR 151
[Close]
BLAST of EY728660 vs. ExPASy Swiss-Prot
Match: GLGC_ECOLI (Glucose-1-phosphate adenylyltransferase OS=Escherichia coli (strain K12) GN=glgC PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 8.405e-18
Identity = 51/131 (38.93%), Postives = 80/131 (61.07%), Query Frame = 1 
Query:  364 LYL*GGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGG*QNEGLVEVLGCQRSPENPNGFQGTADAVRQYLWVVEGHNGLGMPGVGGERLVRRDFEK 756
            L L GG GTRL  LT KRAKPAV  G  +R+ID  +SNC+NS I ++ V+TQ+ S +L +H+ R + S      NE  V++L  Q+  +  N ++GTADAV Q L ++  +    +  + G+ + ++D+ +
Sbjct:   23 LILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCINSGIRRMGVITQYQSHTLVQHIQRGW-SFFNEEMNE-FVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSR 151
[Close]
BLAST of EY728660 vs. ExPASy Swiss-Prot
Match: GLGC_ECOLC (Glucose-1-phosphate adenylyltransferase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=glgC PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.405e-18
Identity = 51/131 (38.93%), Postives = 80/131 (61.07%), Query Frame = 1 
Query:  364 LYL*GGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGG*QNEGLVEVLGCQRSPENPNGFQGTADAVRQYLWVVEGHNGLGMPGVGGERLVRRDFEK 756
            L L GG GTRL  LT KRAKPAV  G  +R+ID  +SNC+NS I ++ V+TQ+ S +L +H+ R + S      NE  V++L  Q+  +  N ++GTADAV Q L ++  +    +  + G+ + ++D+ +
Sbjct:   23 LILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCINSGIRRMGVITQYQSHTLVQHIQRGW-SFFNEEMNE-FVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSR 151
[Close]
BLAST of EY728660 vs. ExPASy Swiss-Prot
Match: GLGC_ECOL6 (Glucose-1-phosphate adenylyltransferase OS=Escherichia coli O6 GN=glgC PE=3 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 8.405e-18
Identity = 51/131 (38.93%), Postives = 80/131 (61.07%), Query Frame = 1 
Query:  364 LYL*GGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGG*QNEGLVEVLGCQRSPENPNGFQGTADAVRQYLWVVEGHNGLGMPGVGGERLVRRDFEK 756
            L L GG GTRL  LT KRAKPAV  G  +R+ID  +SNC+NS I ++ V+TQ+ S +L +H+ R + S      NE  V++L  Q+  +  N ++GTADAV Q L ++  +    +  + G+ + ++D+ +
Sbjct:   23 LILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCINSGIRRMGVITQYQSHTLVQHIQRGW-SFFNEEMNE-FVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSR 151
[Close]
BLAST of EY728660 vs. ExPASy Swiss-Prot
Match: GLGC_ECOL5 (Glucose-1-phosphate adenylyltransferase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=glgC PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.405e-18
Identity = 51/131 (38.93%), Postives = 80/131 (61.07%), Query Frame = 1 
Query:  364 LYL*GGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGG*QNEGLVEVLGCQRSPENPNGFQGTADAVRQYLWVVEGHNGLGMPGVGGERLVRRDFEK 756
            L L GG GTRL  LT KRAKPAV  G  +R+ID  +SNC+NS I ++ V+TQ+ S +L +H+ R + S      NE  V++L  Q+  +  N ++GTADAV Q L ++  +    +  + G+ + ++D+ +
Sbjct:   23 LILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCINSGIRRMGVITQYQSHTLVQHIQRGW-SFFNEEMNE-FVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSR 151
[Close]
BLAST of EY728660 vs. ExPASy Swiss-Prot
Match: GLGC_ECOHS (Glucose-1-phosphate adenylyltransferase OS=Escherichia coli O9:H4 (strain HS) GN=glgC PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.405e-18
Identity = 51/131 (38.93%), Postives = 80/131 (61.07%), Query Frame = 1 
Query:  364 LYL*GGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGG*QNEGLVEVLGCQRSPENPNGFQGTADAVRQYLWVVEGHNGLGMPGVGGERLVRRDFEK 756
            L L GG GTRL  LT KRAKPAV  G  +R+ID  +SNC+NS I ++ V+TQ+ S +L +H+ R + S      NE  V++L  Q+  +  N ++GTADAV Q L ++  +    +  + G+ + ++D+ +
Sbjct:   23 LILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCINSGIRRMGVITQYQSHTLVQHIQRGW-SFFNEEMNE-FVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSR 151
[Close]
BLAST of EY728660 vs. ExPASy Swiss-Prot
Match: GLGC_ECODH (Glucose-1-phosphate adenylyltransferase OS=Escherichia coli (strain K12 / DH10B) GN=glgC PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.405e-18
Identity = 51/131 (38.93%), Postives = 80/131 (61.07%), Query Frame = 1 
Query:  364 LYL*GGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGG*QNEGLVEVLGCQRSPENPNGFQGTADAVRQYLWVVEGHNGLGMPGVGGERLVRRDFEK 756
            L L GG GTRL  LT KRAKPAV  G  +R+ID  +SNC+NS I ++ V+TQ+ S +L +H+ R + S      NE  V++L  Q+  +  N ++GTADAV Q L ++  +    +  + G+ + ++D+ +
Sbjct:   23 LILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCINSGIRRMGVITQYQSHTLVQHIQRGW-SFFNEEMNE-FVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSR 151
[Close]
BLAST of EY728660 vs. ExPASy Swiss-Prot
Match: GLGC_ECOBW (Glucose-1-phosphate adenylyltransferase OS=Escherichia coli (strain K12 / BW2952) GN=glgC PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.405e-18
Identity = 51/131 (38.93%), Postives = 80/131 (61.07%), Query Frame = 1 
Query:  364 LYL*GGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGG*QNEGLVEVLGCQRSPENPNGFQGTADAVRQYLWVVEGHNGLGMPGVGGERLVRRDFEK 756
            L L GG GTRL  LT KRAKPAV  G  +R+ID  +SNC+NS I ++ V+TQ+ S +L +H+ R + S      NE  V++L  Q+  +  N ++GTADAV Q L ++  +    +  + G+ + ++D+ +
Sbjct:   23 LILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCINSGIRRMGVITQYQSHTLVQHIQRGW-SFFNEEMNE-FVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSR 151
[Close]
BLAST of EY728660 vs. ExPASy Swiss-Prot
Match: GLGC_ECO8A (Glucose-1-phosphate adenylyltransferase OS=Escherichia coli O8 (strain IAI1) GN=glgC PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.405e-18
Identity = 51/131 (38.93%), Postives = 80/131 (61.07%), Query Frame = 1 
Query:  364 LYL*GGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGG*QNEGLVEVLGCQRSPENPNGFQGTADAVRQYLWVVEGHNGLGMPGVGGERLVRRDFEK 756
            L L GG GTRL  LT KRAKPAV  G  +R+ID  +SNC+NS I ++ V+TQ+ S +L +H+ R + S      NE  V++L  Q+  +  N ++GTADAV Q L ++  +    +  + G+ + ++D+ +
Sbjct:   23 LILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCINSGIRRMGVITQYQSHTLVQHIQRGW-SFFNEEMNE-FVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSR 151
[Close]
BLAST of EY728660 vs. ExPASy Swiss-Prot
Match: GLGC_ECO81 (Glucose-1-phosphate adenylyltransferase OS=Escherichia coli O81 (strain ED1a) GN=glgC PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.405e-18
Identity = 51/131 (38.93%), Postives = 80/131 (61.07%), Query Frame = 1 
Query:  364 LYL*GGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGG*QNEGLVEVLGCQRSPENPNGFQGTADAVRQYLWVVEGHNGLGMPGVGGERLVRRDFEK 756
            L L GG GTRL  LT KRAKPAV  G  +R+ID  +SNC+NS I ++ V+TQ+ S +L +H+ R + S      NE  V++L  Q+  +  N ++GTADAV Q L ++  +    +  + G+ + ++D+ +
Sbjct:   23 LILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCINSGIRRMGVITQYQSHTLVQHIQRGW-SFFNEEMNE-FVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSR 151
The following BLAST results are available for this feature:
BLAST of EY728660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 305
Match NameE-valueIdentityDescription
GLGC_ECOLU8.405e-1838.93Glucose-1-phosphate adenylyltransferase OS=Escheri... [more]
GLGC_ECOLI8.405e-1838.93Glucose-1-phosphate adenylyltransferase OS=Escheri... [more]
GLGC_ECOLC8.405e-1838.93Glucose-1-phosphate adenylyltransferase OS=Escheri... [more]
GLGC_ECOL68.405e-1838.93Glucose-1-phosphate adenylyltransferase OS=Escheri... [more]
GLGC_ECOL58.405e-1838.93Glucose-1-phosphate adenylyltransferase OS=Escheri... [more]
GLGC_ECOHS8.405e-1838.93Glucose-1-phosphate adenylyltransferase OS=Escheri... [more]
GLGC_ECODH8.405e-1838.93Glucose-1-phosphate adenylyltransferase OS=Escheri... [more]
GLGC_ECOBW8.405e-1838.93Glucose-1-phosphate adenylyltransferase OS=Escheri... [more]
GLGC_ECO8A8.405e-1838.93Glucose-1-phosphate adenylyltransferase OS=Escheri... [more]
GLGC_ECO818.405e-1838.93Glucose-1-phosphate adenylyltransferase OS=Escheri... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-006-H01-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728660 ID=EY728660; Name=EY728660; organism=Citrus sinensis; type=EST; length=910bp
CCACGCGTCCGCCCATGCGTCCGCACACTCACTCAGGCTCAGCTCGCTTA
ACGATTACTGTTAACGTTAACAGATTGTACCGATTAATGGCGAGTATGGC
GTCGATCGGATCGCTCAAAGTTCCGTCATCTCCGTCAACTGCAGCAACGT
CGTCTAACTCCAACAATCACAGCCGCAGGAGTGTGGTTAAACGACTGGCG
TTCTCGTCGTCTCAGCTCTCCGGTGACAAGATTTTTTCTAAAGCTGTCAC
CGGTGATCGGCGAAGGGAGAGGCGTCCGATCGTTGTGTCTCCTCAAGCGG
TGTCGGATTCGAAAAATTCGCAGACTTGCCTTGATCCTGAAGCCAGTCGA
AGTGTTTTGGGGATTATACTTGTGAGGTGGAGCAGGGACTCGCTTGTATC
CACTTACGAAGAAGAGGGCGAAGCCTGCTGTTCCATTGGGAGCTAATTAC
AGGCTGATTGATATTCCTGTGAGCAATTGTTTGAATAGTAACATTTCAAA
GATCTATGTTCTCACTCAGTTCAATTCTGCGTCCCTGAATCGTCACCTAT
CGAGGGCGTATGCTAGCAACATGGGTGGTTGACAGAACGAAGGATTGGTT
GAAGTTCTTGGCTGCCAGCGGAGTCCAGAGAATCCCAATGGGTTTCAGGG
TACAGCTGATGCTGTGAGGCAGTATTTGTGGGTGGTTGAGGGACACAATG
GTCTGGGAATGCCCGGTGTGGGTGGTGAACGTTTGGTGCGAAGGGACTTT
GAAAAATGATGCAGGCGGCAAGAGAAACGATCCGGGTTTCAAGAAGTCTG
GCTGGCCAGGGAAGAAAAGAGGGCCAGTGGCTTGGGGGTGCTGAGGTTGA
TGACTAAGGGGCGGGGTGCAGTTGGTGTGGAACCGCGGGGGGGCCGGTGG
GAGAGGGAGG
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