EY728660

Overview
NameEY728660
Unique NameEY728660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length910
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728660 vs. ExPASy Swiss-Prot
Match: GLGC_ECO7I (Glucose-1-phosphate adenylyltransferase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=glgC PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.405e-18
Identity = 51/131 (38.93%), Postives = 80/131 (61.07%), Query Frame = 1
Query:  364 LYL*GGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGG*QNEGLVEVLGCQRSPENPNGFQGTADAVRQYLWVVEGHNGLGMPGVGGERLVRRDFEK 756
            L L GG GTRL  LT KRAKPAV  G  +R+ID  +SNC+NS I ++ V+TQ+ S +L +H+ R + S      NE  V++L  Q+  +  N ++GTADAV Q L ++  +    +  + G+ + ++D+ +
Sbjct:   23 LILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCINSGIRRMGVITQYQSHTLVQHIQRGW-SFFNEEMNE-FVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSR 151          
BLAST of EY728660 vs. ExPASy Swiss-Prot
Match: GLGC_ECO5E (Glucose-1-phosphate adenylyltransferase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=glgC PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.405e-18
Identity = 51/131 (38.93%), Postives = 80/131 (61.07%), Query Frame = 1
Query:  364 LYL*GGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGG*QNEGLVEVLGCQRSPENPNGFQGTADAVRQYLWVVEGHNGLGMPGVGGERLVRRDFEK 756
            L L GG GTRL  LT KRAKPAV  G  +R+ID  +SNC+NS I ++ V+TQ+ S +L +H+ R + S      NE  V++L  Q+  +  N ++GTADAV Q L ++  +    +  + G+ + ++D+ +
Sbjct:   23 LILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCINSGIRRMGVITQYQSHTLVQHIQRGW-SFFNEEMNE-FVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSR 151          
BLAST of EY728660 vs. ExPASy Swiss-Prot
Match: GLGC_ECO57 (Glucose-1-phosphate adenylyltransferase OS=Escherichia coli O157:H7 GN=glgC PE=3 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 8.405e-18
Identity = 51/131 (38.93%), Postives = 80/131 (61.07%), Query Frame = 1
Query:  364 LYL*GGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGG*QNEGLVEVLGCQRSPENPNGFQGTADAVRQYLWVVEGHNGLGMPGVGGERLVRRDFEK 756
            L L GG GTRL  LT KRAKPAV  G  +R+ID  +SNC+NS I ++ V+TQ+ S +L +H+ R + S      NE  V++L  Q+  +  N ++GTADAV Q L ++  +    +  + G+ + ++D+ +
Sbjct:   23 LILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCINSGIRRMGVITQYQSHTLVQHIQRGW-SFFNEEMNE-FVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSR 151          
BLAST of EY728660 vs. ExPASy Swiss-Prot
Match: GLGC_ECO55 (Glucose-1-phosphate adenylyltransferase OS=Escherichia coli (strain 55989 / EAEC) GN=glgC PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.405e-18
Identity = 51/131 (38.93%), Postives = 80/131 (61.07%), Query Frame = 1
Query:  364 LYL*GGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGG*QNEGLVEVLGCQRSPENPNGFQGTADAVRQYLWVVEGHNGLGMPGVGGERLVRRDFEK 756
            L L GG GTRL  LT KRAKPAV  G  +R+ID  +SNC+NS I ++ V+TQ+ S +L +H+ R + S      NE  V++L  Q+  +  N ++GTADAV Q L ++  +    +  + G+ + ++D+ +
Sbjct:   23 LILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCINSGIRRMGVITQYQSHTLVQHIQRGW-SFFNEEMNE-FVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSR 151          
BLAST of EY728660 vs. ExPASy Swiss-Prot
Match: GLGC_ECO45 (Glucose-1-phosphate adenylyltransferase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=glgC PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.405e-18
Identity = 51/131 (38.93%), Postives = 80/131 (61.07%), Query Frame = 1
Query:  364 LYL*GGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGG*QNEGLVEVLGCQRSPENPNGFQGTADAVRQYLWVVEGHNGLGMPGVGGERLVRRDFEK 756
            L L GG GTRL  LT KRAKPAV  G  +R+ID  +SNC+NS I ++ V+TQ+ S +L +H+ R + S      NE  V++L  Q+  +  N ++GTADAV Q L ++  +    +  + G+ + ++D+ +
Sbjct:   23 LILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCINSGIRRMGVITQYQSHTLVQHIQRGW-SFFNEEMNE-FVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSR 151          
BLAST of EY728660 vs. ExPASy Swiss-Prot
Match: GLGC_ECO24 (Glucose-1-phosphate adenylyltransferase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=glgC PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.405e-18
Identity = 51/131 (38.93%), Postives = 80/131 (61.07%), Query Frame = 1
Query:  364 LYL*GGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGG*QNEGLVEVLGCQRSPENPNGFQGTADAVRQYLWVVEGHNGLGMPGVGGERLVRRDFEK 756
            L L GG GTRL  LT KRAKPAV  G  +R+ID  +SNC+NS I ++ V+TQ+ S +L +H+ R + S      NE  V++L  Q+  +  N ++GTADAV Q L ++  +    +  + G+ + ++D+ +
Sbjct:   23 LILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCINSGIRRMGVITQYQSHTLVQHIQRGW-SFFNEEMNE-FVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSR 151          
BLAST of EY728660 vs. ExPASy Swiss-Prot
Match: GLGC2_VIBPA (Glucose-1-phosphate adenylyltransferase 2 OS=Vibrio parahaemolyticus GN=glgC2 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.405e-18
Identity = 58/165 (35.15%), Postives = 85/165 (51.52%), Query Frame = 1
Query:  376 GGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGG*QNEGLVEVLGCQRSPENPNG--FQGTADAVRQYLWVVEGHNGLGMPGVGGERLVRRDFEK*C-RRQEKRSGFQEVWLAREEKRASGLGVLRLMTKG 861
            GG G+RL PLT  RAKPAVP G  YR+ID  ++NCLNS + KI VLTQ+ S SL +HL   ++       N  L E +          G  ++GTADA+   LW++  ++   +  + G+ + R D+       +EK +      +    K AS  GV+ +   G
Sbjct:   11 GGMGSRLSPLTDDRAKPAVPFGGKYRIIDFTLTNCLNSGLRKILVLTQYKSHSLQKHLRDGWSI-----FNPELGEYITAVPPQMRKGGAWYEGTADAIYHNLWLLSRNDAKYVVVLSGDHIYRMDYAAMLEEHKEKGAKLTVACMDVPVKDASAFGVMGIAENG 170          
BLAST of EY728660 vs. ExPASy Swiss-Prot
Match: GLGC_KLEP7 (Glucose-1-phosphate adenylyltransferase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=glgC PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.098e-17
Identity = 52/131 (39.69%), Postives = 79/131 (60.31%), Query Frame = 1
Query:  364 LYL*GGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGG*QNEGLVEVLGCQRSPENPNGFQGTADAVRQYLWVVEGHNGLGMPGVGGERLVRRDFEK 756
            L L GG GTRL  LT KRAKPAV  G  +R+ID  +SNC+NS I +I V+TQ+ S +L +H+ R + S      NE  V++L  Q+     N ++GTADAV Q L ++  +    +  + G+ + ++D+ +
Sbjct:   23 LILAGGRGTRLKDLTIKRAKPAVHFGGKFRIIDFALSNCINSGIRRIGVITQYQSHTLVQHIQRGW-SFFSEEMNE-FVDLLPAQQRVHGENWYRGTADAVTQNLDIISRYKAEYVVILAGDHIYKQDYSR 151          
BLAST of EY728660 vs. ExPASy Swiss-Prot
Match: GLGC_KLEP3 (Glucose-1-phosphate adenylyltransferase OS=Klebsiella pneumoniae (strain 342) GN=glgC PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.098e-17
Identity = 52/131 (39.69%), Postives = 79/131 (60.31%), Query Frame = 1
Query:  364 LYL*GGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGG*QNEGLVEVLGCQRSPENPNGFQGTADAVRQYLWVVEGHNGLGMPGVGGERLVRRDFEK 756
            L L GG GTRL  LT KRAKPAV  G  +R+ID  +SNC+NS I +I V+TQ+ S +L +H+ R + S      NE  V++L  Q+     N ++GTADAV Q L ++  +    +  + G+ + ++D+ +
Sbjct:   23 LILAGGRGTRLKDLTIKRAKPAVHFGGKFRIIDFALSNCINSGIRRIGVITQYQSHTLVQHIQRGW-SFFSEEMNE-FVDLLPAQQRVHGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSR 151          
BLAST of EY728660 vs. ExPASy Swiss-Prot
Match: GLGC_FRATM (Glucose-1-phosphate adenylyltransferase OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=glgC PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.098e-17
Identity = 55/143 (38.46%), Postives = 85/143 (59.44%), Query Frame = 1
Query:  364 LYL*GGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGG*QNEGLVEVLGCQRSPENPNGFQGTADAVRQYLWVVEGHNGLGMPGVGGERLVRRDFEK*CRRQEKRSGFQ 792
            L L GG G+RLY LT  RAKPAV  G  +R+ID  +SNCLNS I +I V+TQ+ S SL RHL R +   + G  NE  +++L  Q+  +  + ++GTADAV Q + ++  +    +  + G+ + + D+     R   +SG++
Sbjct:   17 LVLAGGRGSRLYNLTDTRAKPAVYFGGKFRIIDFALSNCLNSGIRRIGVVTQYKSHSLLRHLQRGWGF-LRGELNE-FIDLLPAQQRVDEEHWYRGTADAVYQNIDILRSYGPEYVIVLAGDHIYKMDYSI-MLRDHAQSGYK 156          
The following BLAST results are available for this feature:
BLAST of EY728660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 305
Match NameE-valueIdentityDescription
GLGC_ECO7I8.405e-1838.93Glucose-1-phosphate adenylyltransferase OS=Escheri... [more]
GLGC_ECO5E8.405e-1838.93Glucose-1-phosphate adenylyltransferase OS=Escheri... [more]
GLGC_ECO578.405e-1838.93Glucose-1-phosphate adenylyltransferase OS=Escheri... [more]
GLGC_ECO558.405e-1838.93Glucose-1-phosphate adenylyltransferase OS=Escheri... [more]
GLGC_ECO458.405e-1838.93Glucose-1-phosphate adenylyltransferase OS=Escheri... [more]
GLGC_ECO248.405e-1838.93Glucose-1-phosphate adenylyltransferase OS=Escheri... [more]
GLGC2_VIBPA8.405e-1835.15Glucose-1-phosphate adenylyltransferase 2 OS=Vibri... [more]
GLGC_KLEP71.098e-1739.69Glucose-1-phosphate adenylyltransferase OS=Klebsie... [more]
GLGC_KLEP31.098e-1739.69Glucose-1-phosphate adenylyltransferase OS=Klebsie... [more]
GLGC_FRATM1.098e-1738.46Glucose-1-phosphate adenylyltransferase OS=Francis... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-006-H01-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728660 ID=EY728660; Name=EY728660; organism=Citrus sinensis; type=EST; length=910bp
CCACGCGTCCGCCCATGCGTCCGCACACTCACTCAGGCTCAGCTCGCTTA
ACGATTACTGTTAACGTTAACAGATTGTACCGATTAATGGCGAGTATGGC
GTCGATCGGATCGCTCAAAGTTCCGTCATCTCCGTCAACTGCAGCAACGT
CGTCTAACTCCAACAATCACAGCCGCAGGAGTGTGGTTAAACGACTGGCG
TTCTCGTCGTCTCAGCTCTCCGGTGACAAGATTTTTTCTAAAGCTGTCAC
CGGTGATCGGCGAAGGGAGAGGCGTCCGATCGTTGTGTCTCCTCAAGCGG
TGTCGGATTCGAAAAATTCGCAGACTTGCCTTGATCCTGAAGCCAGTCGA
AGTGTTTTGGGGATTATACTTGTGAGGTGGAGCAGGGACTCGCTTGTATC
CACTTACGAAGAAGAGGGCGAAGCCTGCTGTTCCATTGGGAGCTAATTAC
AGGCTGATTGATATTCCTGTGAGCAATTGTTTGAATAGTAACATTTCAAA
GATCTATGTTCTCACTCAGTTCAATTCTGCGTCCCTGAATCGTCACCTAT
CGAGGGCGTATGCTAGCAACATGGGTGGTTGACAGAACGAAGGATTGGTT
GAAGTTCTTGGCTGCCAGCGGAGTCCAGAGAATCCCAATGGGTTTCAGGG
TACAGCTGATGCTGTGAGGCAGTATTTGTGGGTGGTTGAGGGACACAATG
GTCTGGGAATGCCCGGTGTGGGTGGTGAACGTTTGGTGCGAAGGGACTTT
GAAAAATGATGCAGGCGGCAAGAGAAACGATCCGGGTTTCAAGAAGTCTG
GCTGGCCAGGGAAGAAAAGAGGGCCAGTGGCTTGGGGGTGCTGAGGTTGA
TGACTAAGGGGCGGGGTGCAGTTGGTGTGGAACCGCGGGGGGGCCGGTGG
GAGAGGGAGG
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