EY728657

Overview
NameEY728657
Unique NameEY728657
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728657 vs. ExPASy Swiss-Prot
Match: ACR4_ARATH (Serine/threonine-protein kinase-like protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.616e-11
Identity = 46/148 (31.08%), Postives = 72/148 (48.65%), Query Frame = 1
Query:   16 KISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLLSYAWKHWRDGTPLQLLDSNLTDSYSRNEVIRCIQLGLLCVQEDPAERPSMATIVLMLNSYSVTL---PSPQHP 450
            +++DFG++ +  VD          GT GY+ PEY      + KSDVYSFGVL+LEI++G+K    +  +G  +++ +A    + G    LLD  L        + R + +   CV+    +RPSM  +   L      L   PS + P
Sbjct:  656 RVADFGLSLLGPVDSGSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMHYEEG--NIVEWAVPLIKAGDINALLDPVLKHPSEIEALKRIVSVACKCVRMRGKDRPSMDKVTTALERALAQLMGNPSSEQP 801          
BLAST of EY728657 vs. ExPASy Swiss-Prot
Match: Y5838_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 OS=Arabidopsis thaliana GN=At5g48380 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.334e-11
Identity = 44/146 (30.14%), Postives = 80/146 (54.79%), Query Frame = 1
Query:   13 PKISDFGMAKIFGVDQTQGNT--NRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSF--------YQTDGAADLLSYAWKHWRDGTPLQLLDSNLTDSYSRNEVIRCIQLGLLCVQEDPA-ERPSMATIVLMLNS 417
            PKISDFG+A++     T  +T  N   G +GY+APEY+     + K DVYSFGV++LE++TG+K +S          + +   +L+ +  K   +    + +D +L  +   +E+ + +++   CV  + A +RP+M  +  +L +
Sbjct:  443 PKISDFGLARLMNPIDTHLSTFVNGEFGDFGYVAPEYSRTMVATPKGDVYSFGVVLLELVTGQKATSVTKVSEEKAEEENFKGNLVEWITKLSSESKLQEAIDRSLLGNGVDDEIFKVLKVACNCVLPEIAKQRPTMFEVYQLLRA 588          
BLAST of EY728657 vs. ExPASy Swiss-Prot
Match: Y1570_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g05700 OS=Arabidopsis thaliana GN=At1g05700 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.334e-11
Identity = 43/137 (31.39%), Postives = 72/137 (52.55%), Query Frame = 1
Query:   10 RPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTD--GAADLLSYAWKHWRDGTPLQLLDSNLTDSYSRNEVIRCIQLGLLCVQEDPAERPSMATIVLMLN 414
            R K++DFG+++ F  +     +  + GT GY+ P        + KSD+YSFGV++LE+ITGK      QT     +D +    +   D     ++DS +   +  N V + ++L L  V ++ ++RP+M  IV  LN
Sbjct:  706 RAKLADFGLSRSFHTESRSHVSTLVAGTPGYLDPLCFETNGLNEKSDIYSFGVVLLEMITGKTVIKESQTKRVHVSDWVISILRSTNDVN--NVIDSKMAKDFDVNSVWKVVELALSSVSQNVSDRPNMPHIVRGLN 840          
BLAST of EY728657 vs. ExPASy Swiss-Prot
Match: BRI1_SOLPE (Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.334e-11
Identity = 40/133 (30.08%), Postives = 74/133 (55.64%), Query Frame = 1
Query:   16 KISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLLSYAWKHWRDGTPLQLLDSNL--TDSYSRNEVIRCIQLGLLCVQEDPAERPSMATIVLM 408
            ++SDFGMA++     T  + + + GT GY+ PEY    + S K DVYS+GV++LE++TGK+ +      G  +L+ +   H + G    + D  L   D+    E+++ +++   C+ +   +RP+M  ++ M
Sbjct: 1029 RVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKQPTDSADF-GDNNLVGWVKLHAK-GKITDVFDRELLKEDASIEIELLQHLKVACACLDDRHWKRPTMIQVMAM 1159          
BLAST of EY728657 vs. ExPASy Swiss-Prot
Match: BRI1_SOLLC (Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.334e-11
Identity = 40/133 (30.08%), Postives = 74/133 (55.64%), Query Frame = 1
Query:   16 KISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLLSYAWKHWRDGTPLQLLDSNL--TDSYSRNEVIRCIQLGLLCVQEDPAERPSMATIVLM 408
            ++SDFGMA++     T  + + + GT GY+ PEY    + S K DVYS+GV++LE++TGK+ +      G  +L+ +   H + G    + D  L   D+    E+++ +++   C+ +   +RP+M  ++ M
Sbjct: 1029 RVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKQPTDSADF-GDNNLVGWVKLHAK-GKITDVFDRELLKEDASIEIELLQHLKVACACLDDRHWKRPTMIQVMAM 1159          
BLAST of EY728657 vs. ExPASy Swiss-Prot
Match: THE1_ARATH (Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.579e-11
Identity = 40/130 (30.77%), Postives = 72/130 (55.38%), Query Frame = 1
Query:   16 KISDFGMAKIF-GVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLLSYAWKHWRDGTPLQLLDSNLTDSYSRNEVIRCIQLGLLCVQEDPAERPSMATIV 402
            K++DFG++K    +DQT  +T  + G++GY+ PEY    Q + KSDVYSFGV+++E++  +   +        ++  +A    + G   Q++DSNLT   +   + +  +    C+ E   +RPSM  ++
Sbjct:  649 KVADFGLSKTGPSLDQTHVST-AVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCCRPALNPVLPREQVNIAEWAMAWQKKGLLDQIMDSNLTGKVNPASLKKFGETAEKCLAEYGVDRPSMGDVL 777          
The following BLAST results are available for this feature:
BLAST of EY728657 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 186
Match NameE-valueIdentityDescription
ACR4_ARATH5.616e-1131.08Serine/threonine-protein kinase-like protein ACR4 ... [more]
Y5838_ARATH7.334e-1130.14Probably inactive leucine-rich repeat receptor-lik... [more]
Y1570_ARATH7.334e-1131.39Probable LRR receptor-like serine/threonine-protei... [more]
BRI1_SOLPE7.334e-1130.08Systemin receptor SR160 OS=Solanum peruvianum PE=1... [more]
BRI1_SOLLC7.334e-1130.08Brassinosteroid LRR receptor kinase OS=Solanum lyc... [more]
THE1_ARATH9.579e-1130.77Receptor-like protein kinase THESEUS 1 OS=Arabidop... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-006-G08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728657 ID=EY728657; Name=EY728657; organism=Citrus sinensis; type=EST; length=889bp
CCACGCGTCCGCCCAAAAATTTCTGATTTTGGCATGGCAAAGATATTCGG
AGTTGATCAAACTCAAGGAAATACAAACAGAATTGTTGGTACATATGGTT
ACATGGCCCCAGAATATGCTATGCATGGACAATTCTCTGTCAAATCAGAT
GTATATAGTTTTGGTGTCCTCGTCCTGGAGATTATAACTGGCAAGAAGAA
CAGCAGCTTTTATCAAACAGATGGTGCTGCAGATCTTTTGAGCTATGCTT
GGAAACATTGGAGGGATGGAACACCTTTGCAGTTGCTGGATTCAAATCTG
ACAGATTCTTACTCAAGAAATGAAGTGATTAGATGCATCCAATTGGGCTT
ATTATGCGTCCAGGAAGATCCAGCTGAGAGGCCATCAATGGCAACAATAG
TTCTCATGCTCAATAGTTACTCTGTCACACTTCCGTCGCCTCAACATCCT
GCATTTTTCATAGGCAGTCGAACTGAGAGGGACTTGCCCACAAAAGAATT
TGAGTGCTCTGATAAATCTACAAGCAAGTCGATTCCATGGTCTGTTGATG
AAGCGTCAATTACTGAAGTATACCCCCGTTAACTTGTAAGAACTGTTAAT
GATGCTTCTTCTTTATGTTAGTATATGATCTACCGAGGGGCAGGGCTGGT
ACGGTATGGGGGAGAATGGCATGGTTTACGACAAGCAATAATGAANAAGA
GGAGGTGCCCTTCGAATTGAATTATGCGGCGTTGCTTTATCCAAAGTTTT
TATTCGTTGAAGTTATGAAATTGTATGTGTGAGTAATGATACACGTTGGG
ATATANATTTCCCATACCATGTAGTTTTGTCCTAGTCGCTCGTAATGTCT
GCTGGTAGGAGCCCAAGTCATGAATTATTCAAATGATAA
back to top