EY728654

Overview
NameEY728654
Unique NameEY728654
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length896
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728654 vs. ExPASy Swiss-Prot
Match: ETR1_SCHPO (Probable trans-2-enoyl-CoA reductase, mitochondrial OS=Schizosaccharomyces pombe GN=etr1 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.717e-21
Identity = 64/194 (32.99%), Postives = 95/194 (48.97%), Query Frame = 1
Query:  220 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXXXXXXXXXXXXXXXXXXT----------RLAPGDWVIPSPPSSGTW--------QSYVVKDQSVWHKISKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVXNGATSIVGQCIIQIARHRGIHSINIIRDR 747
            +KA+ Y   G P  V++ +     +  +N V V+ LA+PINPSDIN+I+GVYP +P                                  +PG W I    + G+W        +S V  D+S +  I++      AAT+ VNP TA  +L+    LN GD  + +GA S+VG   IQ+A+H G  SIN++R+R
Sbjct:   21 AKAIAYSEYGNPKEVLRAVSYNVPKCSKNQVNVRFLASPINPSDINQIQGVYPSKPPFTNDVCSSKPSAVAGNEGLVEVVDVGDQFKGTFSPGQWAILGSVNLGSWRTEMNIDGRSLVPVDKSAFPSIAE------AATLSVNPCTAYCLLQHVVQLNKGDWFIQDGANSMVGIATIQLAKHFGYKSINVVRNR 208          
BLAST of EY728654 vs. ExPASy Swiss-Prot
Match: MECR2_CAEEL (Probable trans-2-enoyl-CoA reductase 2, mitochondrial OS=Caenorhabditis elegans GN=Y48A6B.9 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.348e-20
Identity = 60/177 (33.90%), Postives = 94/177 (53.11%), Query Frame = 1
Query:  220 SKAVVYEREGPPDSVIKMIELP-PVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXXXXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKISKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVXNGATSIVGQCIIQIARHRGIHSINIIRDR 747
            S+A++Y + G P  V+++  +  P E    +  V+ LA+PINP DINRI+G Y VR ++P                  +R   GD V     ++  W  + V D     K+    P++ AAT+++NP TA  ML+ +  L  GD I+ N A S VG+ +I++ +  G  SINI+R+R
Sbjct:    7 SQALIYRKFGDPLKVLQLETVEVPAEPGSGECLVEWLASPINPLDINRIQGNYAVRAELPVIGGSEGVGRVVKAGSG-SRFKSGDHVTIFSANTPIWTEFGVVDDDELVKLDNRIPLDLAATLMINPPTAWIMLKKYVNLQKGDYIIQNSANSGVGRSVIEMCKALGYKSINIVRNR 182          
BLAST of EY728654 vs. ExPASy Swiss-Prot
Match: ETR2_CANTR (Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 2, mitochondrial OS=Candida tropicalis GN=ETR2 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.004e-20
Identity = 66/199 (33.17%), Postives = 98/199 (49.25%), Query Frame = 1
Query:  220 SKAVVYEREGPPDSVI--KMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRP---------KVPXXXXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKISKDSP-----------MEYAATIIVNPLTALRMLEDFTTLNSG-DSIVXNGATSIVGQCIIQIARHRGIHSINIIRDR 747
            ++AV+Y + G P  V+  +  E+    +  N+V VK L +PINPSDIN+I+GVYP +P         +                    + L  GDWVIPS  + GTW+++ + +   + K+   +            +   ATI VNPLTA  ML  +  L  G D  + NG TS VG+   QI +    +SI++IRDR
Sbjct:   26 AQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPINPSDINQIQGVYPSKPAKTTGFGTAEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDR 224          
BLAST of EY728654 vs. ExPASy Swiss-Prot
Match: ETR1_CANTR (Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1, mitochondrial OS=Candida tropicalis GN=ETR1 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.923e-20
Identity = 65/199 (32.66%), Postives = 98/199 (49.25%), Query Frame = 1
Query:  220 SKAVVYEREGPPDSVI--KMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRP---------KVPXXXXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKISKDSP-----------MEYAATIIVNPLTALRMLEDFTTLNSG-DSIVXNGATSIVGQCIIQIARHRGIHSINIIRDR 747
            ++AV+Y + G P  V+  +  E+    +  N+V VK L +P+NPSDIN+I+GVYP +P         +                    + L  GDWVIPS  + GTW+++ + +   + K+   +            +   ATI VNPLTA  ML  +  L  G D  + NG TS VG+   QI +    +SI++IRDR
Sbjct:   26 AQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDR 224          
BLAST of EY728654 vs. ExPASy Swiss-Prot
Match: ETR2_DEBHA (Probable trans-2-enoyl-CoA reductase 2, mitochondrial OS=Debaryomyces hansenii GN=ETR2 PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.124e-20
Identity = 64/199 (32.16%), Postives = 97/199 (48.74%), Query Frame = 1
Query:  220 SKAVVYEREGPPDSVIKMI--ELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVP---------XXXXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVV-----------KDQSVWHKISKDSPMEYAATIIVNPLTALRMLEDFTTLNSG-DSIVXNGATSIVGQCIIQIARHRGIHSINIIRDR 747
            ++AVVY + G P  V+K +  E+    +  N + VK L +P+NPSDIN+I+GVYP +P+                             +    GDW +P+  + GTW+++++            +QS  +       +   ATI VNPLTA  ML  +  L  G D  + NG  S VG+   QI+   GI+SI++IRDR
Sbjct:   26 AQAVVYAQHGEPKDVLKTLKYEIDDDNLDSNSIIVKTLGSPVNPSDINQIQGVYPSKPEKTTELGSNEPVAVCGNEGLFEILKVGDNVSNFKVGDWCVPTSVNMGTWRTHMLCGGDEMTKIPNPEQSKANGKPSGLSVNQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGNSAVGKYATQISNLLGINSISVIRDR 224          
BLAST of EY728654 vs. ExPASy Swiss-Prot
Match: ETR1_ASHGO (Probable trans-2-enoyl-CoA reductase, mitochondrial OS=Ashbya gossypii GN=ETR1 PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.648e-18
Identity = 64/192 (33.33%), Postives = 98/192 (51.04%), Query Frame = 1
Query:  214 PPSKAVVYEREGPPD--SVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRP---------KVPXXXXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSY-VVKDQSVWHKISKDSPMEYAATIIVNPLTALRMLEDFTTLN-SGDS-IVXNGATSIVGQCIIQIARHRGIHSINIIRDR 747
            P  K+++Y    P D   V+K+    P    +  + ++ LA PINPSDIN+++GVYP  P         K                     RLA GDWVIP   ++GTW +Y   +D     K++    +  AATI VN  TA +++ D+   + SG+  IV N  TS V + + Q+A+ RG+ ++++IRDR
Sbjct:   17 PLFKSLLYSSHDPADCTQVLKVHSYTPKVGADESILLRTLAFPINPSDINQLQGVYPSVPEKTLDYSTEKPAAIAGNEGVFEVMSVPQGERRLAVGDWVIPLYSNTGTWTNYQTCRDAGTLVKVN-GLDLYTAATIAVNGCTAYQLVNDYVQWDPSGNEWIVQNAGTSAVSKIVTQVAQARGVKTLSVIRDR 207          
BLAST of EY728654 vs. ExPASy Swiss-Prot
Match: ETR1_KLULA (Probable trans-2-enoyl-CoA reductase, mitochondrial OS=Kluyveromyces lactis GN=ETR1 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.044e-17
Identity = 58/188 (30.85%), Postives = 92/188 (48.94%), Query Frame = 1
Query:  223 KAVVYEREGPPD--SVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRP---------KVPXXXXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKISKDSPMEYAATIIVNPLTALRMLEDFTTLN--SGDSIVXNGATSIVGQCIIQIARHRGIHSINIIRDR 747
            K+++Y      D   V+K+    P +  E  + +K LA PINPSDIN++EGVYP +P         +                    + L PGD VIP   + GTW +Y   D+       +   +  AAT+ VN  TA +++ D+   +    D +V N  TS V + + QIA+ + I+++++IRDR
Sbjct:   25 KSLIYSSHDSQDCTKVLKVHNYKPKKGSETSIVLKTLAFPINPSDINQLEGVYPSKPDKVTDYSTDEPSAIAGNEGVFEVVSVPSSVSTLKPGDKVIPLQANFGTWSTYRTCDKESDLIKIEGVDIYTAATVAVNGCTAYQLVNDYINWDPKGNDWLVQNAGTSSVSKIVTQIAKAKNINTLSVIRDR 212          
BLAST of EY728654 vs. ExPASy Swiss-Prot
Match: ETR1_CANGA (Probable trans-2-enoyl-CoA reductase, mitochondrial OS=Candida glabrata GN=ETR1 PE=3 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 1.306e-15
Identity = 55/190 (28.95%), Postives = 90/190 (47.37%), Query Frame = 1
Query:  223 KAVVYEREGPPD--SVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV-----------RPKVPXXXXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKISKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDS--IVXNGATSIVGQCIIQIARHRGIHSINIIRDR 747
            K+++Y      D   V+ +    P +     V ++ LA PINPSDIN+++GVYP            +P                       L  GDWVIP   + GTW +Y V D++          +  AAT+ VN  TA +++ ++   N+  +  ++ N  TS V + + QIA+ RG+ ++++IRDR
Sbjct:   26 KSIIYNSHSLEDCTGVLSVHNYKPKQDLNKSVVLRTLAFPINPSDINQLQGVYPSLPEKTLDYSTEKPSAIAGNEGLFEVVSLPEHGDHGELKVGDWVIPVQANQGTWSNYRVFDKASDLIKVNGLDLYSAATVSVNGCTAYQLVNNYVDWNADGNEWLIQNAGTSGVSKFVTQIAKARGVKTLSVIRDR 215          
BLAST of EY728654 vs. ExPASy Swiss-Prot
Match: ETR1_YEAST (Enoyl-[acyl-carrier protein] reductase [NADPH, B-specific], mitochondrial OS=Saccharomyces cerevisiae GN=ETR1 PE=1 SV=3)

HSP 1 Score: 82.4185 bits (202), Expect = 3.800e-15
Identity = 57/190 (30.00%), Postives = 88/190 (46.32%), Query Frame = 1
Query:  223 KAVVYEREGPPD--SVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXXXXXXXXXXXXXXXXXXT-----------RLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKISKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDS--IVXNGATSIVGQCIIQIARHRGIHSINIIRDR 747
            K+++Y      D   V+ +    P +     + +K LA PINPSDIN+++GVYP RP+                                 L  GD VIP   + GTW +Y V   S       D  +  AAT+ VN  T  +++ D+   NS  +  I+ N  TS V + + Q+A+ +GI ++++IRDR
Sbjct:   21 KSLIYSTHEVEDCTKVLSVKNYTPKQDLSQSIVLKTLAFPINPSDINQLQGVYPSRPEKTYDYSTDEPAAIAGNEGVFEVVSLPSGSSKGDLKLGDRVIPLQANQGTWSNYRVFSSSSDLIKVNDLDLFSAATVSVNGCTGFQLVSDYIDWNSNGNEWIIQNAGTSSVSKIVTQVAKAKGIKTLSVIRDR 210          
BLAST of EY728654 vs. ExPASy Swiss-Prot
Match: ETR1_DEBHA (Probable trans-2-enoyl-CoA reductase 1, mitochondrial OS=Debaryomyces hansenii GN=ETR1 PE=3 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 4.963e-15
Identity = 54/167 (32.34%), Postives = 83/167 (49.70%), Query Frame = 1
Query:  310 VCVKMLAAPINPSDINRIEGVYPVRPK--------VPXXXXXXXXXXXXXXXXXX-TRLAPGDWVIPSPPSSGTWQSYVV------KDQSVWHKIS----KDSPMEYAATIIVNPLTALRMLEDFTT---LNSGDSIVXNGATSIVGQCIIQIARHRGIHSINIIRD 744
            V ++ LA PINPSD+N++ G Y  +P         VP                   T    GDWVIP  PS GTW+++ +      ++   + K+S    K   +  AAT+ +NP TA ++++ F         D I+ NG  S VG+ ++QIA+ R I +I++IRD
Sbjct:   38 VVIQALATPINPSDLNQLAGTYASKPNFTSELDTPVPVAIGGNEGLYKVIEVGSDVTSYKNGDWVIPKMPSFGTWRTHALVTLDKPENPDPFIKVSSEDDKSIDLTQAATVSINPSTAYQLIDQFIKDWDPKGNDWIIQNGGNSQVGKFVVQIAKIRNIKTISVIRD 204          
The following BLAST results are available for this feature:
BLAST of EY728654 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
ETR1_SCHPO2.717e-2132.99Probable trans-2-enoyl-CoA reductase, mitochondria... [more]
MECR2_CAEEL1.348e-2033.90Probable trans-2-enoyl-CoA reductase 2, mitochondr... [more]
ETR2_CANTR3.004e-2033.17Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s... [more]
ETR1_CANTR3.923e-2032.66Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s... [more]
ETR2_DEBHA5.124e-2032.16Probable trans-2-enoyl-CoA reductase 2, mitochondr... [more]
ETR1_ASHGO1.648e-1833.33Probable trans-2-enoyl-CoA reductase, mitochondria... [more]
ETR1_KLULA9.044e-1730.85Probable trans-2-enoyl-CoA reductase, mitochondria... [more]
ETR1_CANGA1.306e-1528.95Probable trans-2-enoyl-CoA reductase, mitochondria... [more]
ETR1_YEAST3.800e-1530.00Enoyl-[acyl-carrier protein] reductase [NADPH, B-s... [more]
ETR1_DEBHA4.963e-1532.34Probable trans-2-enoyl-CoA reductase 1, mitochondr... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-006-G04-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728654 ID=EY728654; Name=EY728654; organism=Citrus sinensis; type=EST; length=896bp
CACGCGTCCGATCGTTTTTTGGTGCTAGAGATGCACTCATTGACACGAGC
AACTTTGCCTGCGCTAACCAAACTGGAAAGATCAAAGATGGCATTGGCAA
GATCAGTGGCGCTAAAACTGATAAACAGATCAATTTCAGCAGCAAGTATC
GAATGGGCCCGTGCTCGTCGGGTCCAAGCCCAACGAGTTCGGGCCTTCTC
GGCTCTAATGTCGCCGCCGTCAAAGGCTGTCGTCTACGAGCGGGAGGGCC
CGCCCGACTCAGTCATCAAAATGATAGAGTTACCGCCGGTGGAAGTGAAA
GAGAATGACGTGTGCGTTAAAATGTTAGCTGCTCCTATCAACCCTTCTGA
TATCAATCGCATTGAAGGGGTGTACCCGGTGAGGCCAAAAGTGCCAGCAG
TTGGAGGGTATGAGGGTGTTGGAGAGGTGTATTCTGTCGGCTCTGCAGTT
ACGAGACTGGCCCCCGGTGATTGGGTCATCCCCTCTCCACCCTCATCAGG
AACATGGCAGAGTTATGTTGTGAAAGATCAGAGTGTCTGGCACAAAATTA
GTAAAGATTCACCTATGGAGTATGCTGCTACCATTATTGTTAATCCTTTG
ACTGCTTTAAGAATGCTTGAAGACTTCACAACTCTAAATTCAGGAGATTC
TATCGTCCANAATGGTGCAACAAGCATTGTGGGGCAGTGCATAATTCAGA
TTGCAAGACATCGTGGCATCCATAGCATTAATATTATAAGGGATAGGTAT
TACATGGGAGCTGAGTATTANTTGAGCCCCGGTTGCTTTAATCTTGTTAT
TCCGCAAATTGGTCGATGTTTGAGATAAACAGAGTACATNCCGGTGGGCC
CGGTCGTGGTGTAACCCTGGACATAGAATTGCTTCCACCACGAATT
back to top