EY728652

Overview
NameEY728652
Unique NameEY728652
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length869
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P1_RHIRA (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Rhizomucor racemosus GN=GPD1 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 3.142e-35
Identity = 74/104 (71.15%), Postives = 85/104 (81.73%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 322
            GMAFRVPT DVSVVDLTV L K ASYDEIK AIK  SE  +KG+LGYT D VVS+DFVG+  SS+FDA AGI L+  FVKL++WYDNE+GYS RVVDL+VH +K
Sbjct:  229 GMAFRVPTPDVSVVDLTVNLSKGASYDEIKQAIKKASETTMKGVLGYTSDAVVSSDFVGEVCSSVFDAAAGIQLTPTFVKLIAWYDNEYGYSNRVVDLLVHAAK 332          
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P1_JACOR (Glyceraldehyde-3-phosphate dehydrogenase, muscle OS=Jaculus orientalis PE=1 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 3.142e-35
Identity = 74/106 (69.81%), Postives = 85/106 (80.19%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSKTQ 328
            GMAFRVPT +VSVVDLT RLEK A YD+IK  +K   +G LKG+LGYTE  VVS+DF GDS SS FDA AGIAL+  FVKLVSWYDNE+GYS RVVDL+VHM+  +
Sbjct:  258 GMAFRVPTANVSVVDLTCRLEKPAKYDDIKRVVKQACDGPLKGMLGYTEHQVVSSDFNGDSHSSTFDAGAGIALNDHFVKLVSWYDNEFGYSNRVVDLMVHMASKE 363          
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P_FELCA (Glyceraldehyde-3-phosphate dehydrogenase OS=Felis catus GN=GAPDH PE=2 SV=3)

HSP 1 Score: 148.673 bits (374), Expect = 4.104e-35
Identity = 74/106 (69.81%), Postives = 84/106 (79.25%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSKTQ 328
            GMAFRVPT +VSVVDLT RLEK A YD+IK  +K  SEG LKGILGYTED VVS DF  D+ SS FDA AGIAL+  FVKL+SWYDNE+GYS RVVDL+ HM+  +
Sbjct:  228 GMAFRVPTPNVSVVDLTCRLEKAAKYDDIKKVVKQASEGPLKGILGYTEDQVVSCDFNSDTHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDLMAHMASKE 333          
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P_DROHY (Glyceraldehyde-3-phosphate dehydrogenase OS=Drosophila hydei GN=Gapdh1 PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.104e-35
Identity = 71/102 (69.61%), Postives = 88/102 (86.27%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHM 316
            GMAFRVPT +VSVVDLTVRL K ASYDEIKA ++  + G LKGILGYT+++VVSTDF+ D+ SS+F+ KAGI+L+ KFVKL+SWYDNE+GYS RV+DLI +M
Sbjct:  227 GMAFRVPTPNVSVVDLTVRLGKGASYDEIKAKVQEAANGPLKGILGYTDEEVVSTDFLSDTHSSVFEPKAGISLNDKFVKLISWYDNEFGYSNRVIDLIKYM 328          
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P_AJECA (Glyceraldehyde-3-phosphate dehydrogenase OS=Ajellomyces capsulata GN=GPD PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.360e-35
Identity = 71/104 (68.27%), Postives = 86/104 (82.69%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 322
            GM+ RVPT +VSVVDLT + EK  +YD+IK  IK  SEG+LKGILGY+ED +VS+D  GDSRSSIFDA AGIAL+  F+KL+SWYDNEWGYS RVVDLI +++K
Sbjct:  229 GMSMRVPTANVSVVDLTCKTEKPVTYDQIKQTIKKASEGELKGILGYSEDALVSSDLNGDSRSSIFDASAGIALNDHFIKLISWYDNEWGYSRRVVDLIAYIAK 332          
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P_MUSPF (Glyceraldehyde-3-phosphate dehydrogenase OS=Mustela putorius furo GN=GAPDH PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 7.000e-35
Identity = 74/106 (69.81%), Postives = 85/106 (80.19%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSKTQ 328
            GMAFRVPT +VSVVDLT RLEK A YD+IK  +K  SEG LKGILGYTED VVS DF  D+ SS FDA AGIAL+  FVKL+SWYDNE+GYS RVVDL+V+M+  +
Sbjct:  228 GMAFRVPTPNVSVVDLTCRLEKAAKYDDIKKVVKQASEGPLKGILGYTEDQVVSCDFNSDTHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDLMVYMASKE 333          
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P_HUMAN (Glyceraldehyde-3-phosphate dehydrogenase OS=Homo sapiens GN=GAPDH PE=1 SV=3)

HSP 1 Score: 147.902 bits (372), Expect = 7.000e-35
Identity = 73/106 (68.87%), Postives = 84/106 (79.25%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSKTQ 328
            GMAFRVPT +VSVVDLT RLEK A YD+IK  +K  SEG LKGILGYTE  VVS+DF  D+ SS FDA AGIAL+  FVKL+SWYDNE+GYS RVVDL+ HM+  +
Sbjct:  230 GMAFRVPTANVSVVDLTCRLEKPAKYDDIKKVVKQASEGPLKGILGYTEHQVVSSDFNSDTHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDLMAHMASKE 335          
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P_CANFA (Glyceraldehyde-3-phosphate dehydrogenase OS=Canis familiaris GN=GAPDH PE=2 SV=3)

HSP 1 Score: 147.902 bits (372), Expect = 7.000e-35
Identity = 74/106 (69.81%), Postives = 85/106 (80.19%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSKTQ 328
            GMAFRVPT +VSVVDLT RLEK A YD+IK  +K  SEG LKGILGYTED VVS DF  D+ SS FDA AGIAL+  FVKL+SWYDNE+GYS RVVDL+V+M+  +
Sbjct:  228 GMAFRVPTPNVSVVDLTCRLEKAAKYDDIKKVVKQASEGPLKGILGYTEDQVVSCDFNSDTHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDLMVYMASKE 333          
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3PC_GRAVE (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Gracilaria verrucosa GN=GAPC PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 9.143e-35
Identity = 71/106 (66.98%), Postives = 85/106 (80.19%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSKTQ 328
            GMAFRVPT DVSVVDLTVRL  + SYD+IKA +KA +E  +KGIL YTE+ VVSTDF+ +  S +FDA AGI L+ +F KLV+WYDNEWGYS RVVDLI H++K Q
Sbjct:  230 GMAFRVPTSDVSVVDLTVRLATETSYDDIKATMKAAAEDSMKGILKYTEEAVVSTDFIHEEASCVFDAGAGIMLNSRFCKLVAWYDNEWGYSNRVVDLIAHVAKLQ 335          
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P2_CAEBR (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Caenorhabditis briggsae GN=gpd-2 PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 9.143e-35
Identity = 74/103 (71.84%), Postives = 84/103 (81.55%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMS 319
            GMAFRVPT DVSVVDLT RLEK AS D+IK  IKA +EG LKG+L YTED VVSTDFV D+ SSIFDA A I L+  FVKL+SWYDNE+GYS RVVDLI +++
Sbjct:  236 GMAFRVPTPDVSVVDLTARLEKPASLDDIKRVIKAAAEGPLKGVLAYTEDQVVSTDFVSDTHSSIFDAGASIILNPNFVKLISWYDNEFGYSNRVVDLISYIA 338          
The following BLAST results are available for this feature:
BLAST of EY728652 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 342
Match NameE-valueIdentityDescription
G3P1_RHIRA3.142e-3571.15Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Rhiz... [more]
G3P1_JACOR3.142e-3569.81Glyceraldehyde-3-phosphate dehydrogenase, muscle O... [more]
G3P_FELCA4.104e-3569.81Glyceraldehyde-3-phosphate dehydrogenase OS=Felis ... [more]
G3P_DROHY4.104e-3569.61Glyceraldehyde-3-phosphate dehydrogenase OS=Drosop... [more]
G3P_AJECA5.360e-3568.27Glyceraldehyde-3-phosphate dehydrogenase OS=Ajello... [more]
G3P_MUSPF7.000e-3569.81Glyceraldehyde-3-phosphate dehydrogenase OS=Mustel... [more]
G3P_HUMAN7.000e-3568.87Glyceraldehyde-3-phosphate dehydrogenase OS=Homo s... [more]
G3P_CANFA7.000e-3569.81Glyceraldehyde-3-phosphate dehydrogenase OS=Canis ... [more]
G3PC_GRAVE9.143e-3566.98Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P2_CAEBR9.143e-3571.84Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Caen... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-006-G01-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728652 ID=EY728652; Name=EY728652; organism=Citrus sinensis; type=EST; length=869bp
CACGCGTCCGGGTATGGCTTTCCGTGTACCCACTGTTGATGTCTCAGTGG
TTGACCTCACAGTGAGGCTGGAGAAGGATGCTTCTTATGATGAAATCAAA
GCTGCCATCAAGGCGGAGTCAGAGGGGAAACTAAAGGGTATCTTGGGATA
CACTGAGGATGATGTGGTATCCACCGACTTTGTTGGTGACAGTAGGTCAA
GTATCTTTGATGCCAAGGCTGGTATTGCTTTGAGTAAGAAATTTGTGAAG
CTTGTCTCATGGTATGACAATGAGTGGGGCTACAGTACTCGTGTGGTGGA
TTTGATTGTCCACATGTCGAAGACCCAGTAACTTACTCGGCGTGGCTTGA
GTATGTAACACGCTTAGTTGTGCTAAGTGTGGTGTGTCTTTGTGCTACAT
GTGGTGTGTGTGTGTCTATGTAGAGGGTCGGAGTTTGAGTAAGATCGTGT
CCGGGACGTTATGCTGAGCCTGGGCCGCTCGCGCGGGGGTGTGCTGGGAT
GTGCCGGTGGGAGAGGGGGCAGTGAGTGGTGAGAGGGCGGTGGCGGGGGT
GGCGCGAGCCTCGCGGCTGGGGGATCGGGCTGGTGGCCGGTGAGGGATGG
GGGGGCGGGAGGACGGGGTGAAGTGTTGCTAGATCGAGCACAGCCGTTCG
AGCGACGGGCGGGCGGGACCGGGCGGGAGGTGTTGGTGGGGGTCGGGGGG
GGGGGATTGGGGCGAAGGGCGGCGGCCGCGGCCGGCGGGGGTTGCGTGGA
TGACCCGGCGGGTGTGCGAGGGGACGAGTCGGACGCGGCAAGATATAGGT
GATATCGCTGTGGAGGTCAGGGTAAGTCTGGGCCGCACCGGGTCAGTATT
AGAGTTACCGCTGTAGAGC
back to top