EY728652

Overview
NameEY728652
Unique NameEY728652
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length869
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P_PANVR (Glyceraldehyde-3-phosphate dehydrogenase OS=Panulirus versicolor PE=1 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.484e-40
Identity = 82/104 (78.85%), Postives = 92/104 (88.46%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 322
            GMAFRVPT +VSVVDLTVRL K+ SYD+IKAA+KA SEG L+G+LGYTEDDVVS DF GD+RSSIFDAKAGI LSK FVK+VSWYDNE+GYS RV+DLI HM K
Sbjct:  226 GMAFRVPTPNVSVVDLTVRLGKECSYDDIKAAMKAASEGPLQGVLGYTEDDVVSCDFTGDNRSSIFDAKAGIQLSKTFVKVVSWYDNEFGYSQRVIDLIKHMQK 329          
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P_COCHE (Glyceraldehyde-3-phosphate dehydrogenase OS=Cochliobolus heterostrophus GN=GPD1 PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.484e-40
Identity = 80/104 (76.92%), Postives = 92/104 (88.46%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 322
            GMA RVPT +VSVVDLTVR+EK ASYDEIK A+K  SEG L GILGYTEDD+VSTD  GD+RSSIFDAKAGI+L+K FVKLVSWYDNEWGYS RV+DL+V+++K
Sbjct:  229 GMAMRVPTANVSVVDLTVRIEKGASYDEIKQAVKEASEGSLNGILGYTEDDIVSTDLNGDNRSSIFDAKAGISLNKNFVKLVSWYDNEWGYSRRVLDLLVYIAK 332          
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P_CURLU (Glyceraldehyde-3-phosphate dehydrogenase OS=Curvularia lunata GN=GPD PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 7.227e-40
Identity = 79/104 (75.96%), Postives = 92/104 (88.46%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 322
            GMA RVPT +VSVVDLTVR+EK ASYDEIK A+K  SEG L GILGYTEDD+V+TD  GD+RSSIFDAKAGI+L+K FVKLVSWYDNEWGYS RV+DL+V+++K
Sbjct:  229 GMAMRVPTANVSVVDLTVRIEKGASYDEIKQAVKEASEGPLSGILGYTEDDIVTTDLNGDNRSSIFDAKAGISLNKNFVKLVSWYDNEWGYSRRVLDLLVYIAK 332          
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P_PICPA (Glyceraldehyde-3-phosphate dehydrogenase OS=Pichia pastoris GN=GPD PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.233e-39
Identity = 78/104 (75.00%), Postives = 93/104 (89.42%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 322
            G+AFRVPTVDVSVVDLTV L+K+ +Y+EIK+ IKA SEGKLKG+LGYTED VVS+DF+GD RSSIFDA AGI L+  FVKL+SWYDNE+GYSTRVVDL+ H++K
Sbjct:  229 GLAFRVPTVDVSVVDLTVNLKKETTYEEIKSVIKAASEGKLKGVLGYTEDAVVSSDFLGDERSSIFDASAGIQLTPSFVKLISWYDNEYGYSTRVVDLLQHVAK 332          
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P_ZYGRO (Glyceraldehyde-3-phosphate dehydrogenase OS=Zygosaccharomyces rouxii PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.610e-39
Identity = 80/105 (76.19%), Postives = 92/105 (87.62%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSKT 325
            GMAFRVPTVDVSVVDLTV L K+ SYDEIKAA+K  SEG +KGILGYTEDDVVS+DF+GD+ SSI DA AGI L+  FVKLVSWYDNE+GYSTRVVDL+ H++K+
Sbjct:  228 GMAFRVPTVDVSVVDLTVNLAKETSYDEIKAALKKASEGSMKGILGYTEDDVVSSDFLGDAHSSIVDAAAGIQLTPTFVKLVSWYDNEFGYSTRVVDLVEHVAKS 332          
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P_PHYIN (Glyceraldehyde-3-phosphate dehydrogenase OS=Phytophthora infestans GN=GPDA PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.746e-39
Identity = 80/106 (75.47%), Postives = 91/106 (85.85%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSKTQ 328
            GM+FRVPT DVSVVDLT RL   ASYDEIKAAIK+ SE ++KGILGYTE  VVS+DF+GDS SSIFDA+AGIAL+  FVKLVSWYDNEWGYS+RV+DLI HM K +
Sbjct:  227 GMSFRVPTADVSVVDLTARLVNPASYDEIKAAIKSASENEMKGILGYTEKAVVSSDFIGDSHSSIFDAEAGIALTDDFVKLVSWYDNEWGYSSRVLDLIEHMVKNE 332          
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P1_YEAST (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Saccharomyces cerevisiae GN=TDH1 PE=1 SV=3)

HSP 1 Score: 162.155 bits (409), Expect = 3.587e-39
Identity = 77/104 (74.04%), Postives = 94/104 (90.38%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 322
            GMAFRVPTVDVSVVDLTV+LEK+A+YD+IK A+KA +EG +KG+LGYTED VVS+DF+GD+ +SIFDA AGI LS KFVKL+SWYDNE+GYS RVVDLI +++K
Sbjct:  228 GMAFRVPTVDVSVVDLTVKLEKEATYDQIKKAVKAAAEGPMKGVLGYTEDAVVSSDFLGDTHASIFDASAGIQLSPKFVKLISWYDNEYGYSARVVDLIEYVAK 331          
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P_PHANO (Glyceraldehyde-3-phosphate dehydrogenase OS=Phaeosphaeria nodorum GN=GPD1 PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 6.118e-39
Identity = 77/104 (74.04%), Postives = 93/104 (89.42%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 322
            GM+ RVPT +VSVVDLTVRLEK A+YDEIK A+KA ++G L GILGYTED++VSTD  GD+RSSIFDAKAGI+L+K FVKLVSWYDNEWGYS RV+DL+V+++K
Sbjct:  229 GMSMRVPTSNVSVVDLTVRLEKGATYDEIKEAVKAAADGPLNGILGYTEDEIVSTDLNGDTRSSIFDAKAGISLNKNFVKLVSWYDNEWGYSRRVLDLLVYIAK 332          
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P2_RHIRA (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Rhizomucor racemosus GN=GPD2 PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 6.118e-39
Identity = 80/104 (76.92%), Postives = 91/104 (87.50%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 322
            GMAFRVPT DVSVVDLTVRLEK A+Y+EIKA IK  SE +LKGILGYT D VVSTDFVGD++SSIFDA AGIAL+ KFVKLVSWYDNE+GYS RV+DL+ + +K
Sbjct:  229 GMAFRVPTPDVSVVDLTVRLEKGATYEEIKAVIKKASENELKGILGYTNDQVVSTDFVGDAQSSIFDAAAGIALNDKFVKLVSWYDNEFGYSNRVIDLLAYAAK 332          
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P3_RHIRA (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Rhizomucor racemosus GN=GPD3 PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 7.991e-39
Identity = 83/104 (79.81%), Postives = 91/104 (87.50%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGK-LKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMS 319
            GMAFRVPT DVSVVDLTVRLEK ASYDEIKA IK  SE + LKGILGYTED VVSTDFVGD+ SSIFDAKAGI LS  FVKL+SWYDNE+GYSTRVVDL+ +++
Sbjct:  230 GMAFRVPTPDVSVVDLTVRLEKPASYDEIKATIKKASESEELKGILGYTEDQVVSTDFVGDAHSSIFDAKAGIQLSPTFVKLISWYDNEFGYSTRVVDLLAYVA 333          
The following BLAST results are available for this feature:
BLAST of EY728652 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 342
Match NameE-valueIdentityDescription
G3P_PANVR2.484e-4078.85Glyceraldehyde-3-phosphate dehydrogenase OS=Panuli... [more]
G3P_COCHE2.484e-4076.92Glyceraldehyde-3-phosphate dehydrogenase OS=Cochli... [more]
G3P_CURLU7.227e-4075.96Glyceraldehyde-3-phosphate dehydrogenase OS=Curvul... [more]
G3P_PICPA1.233e-3975.00Glyceraldehyde-3-phosphate dehydrogenase OS=Pichia... [more]
G3P_ZYGRO1.610e-3976.19Glyceraldehyde-3-phosphate dehydrogenase OS=Zygosa... [more]
G3P_PHYIN2.746e-3975.47Glyceraldehyde-3-phosphate dehydrogenase OS=Phytop... [more]
G3P1_YEAST3.587e-3974.04Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Sacc... [more]
G3P_PHANO6.118e-3974.04Glyceraldehyde-3-phosphate dehydrogenase OS=Phaeos... [more]
G3P2_RHIRA6.118e-3976.92Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Rhiz... [more]
G3P3_RHIRA7.991e-3979.81Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Rhiz... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-006-G01-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728652 ID=EY728652; Name=EY728652; organism=Citrus sinensis; type=EST; length=869bp
CACGCGTCCGGGTATGGCTTTCCGTGTACCCACTGTTGATGTCTCAGTGG
TTGACCTCACAGTGAGGCTGGAGAAGGATGCTTCTTATGATGAAATCAAA
GCTGCCATCAAGGCGGAGTCAGAGGGGAAACTAAAGGGTATCTTGGGATA
CACTGAGGATGATGTGGTATCCACCGACTTTGTTGGTGACAGTAGGTCAA
GTATCTTTGATGCCAAGGCTGGTATTGCTTTGAGTAAGAAATTTGTGAAG
CTTGTCTCATGGTATGACAATGAGTGGGGCTACAGTACTCGTGTGGTGGA
TTTGATTGTCCACATGTCGAAGACCCAGTAACTTACTCGGCGTGGCTTGA
GTATGTAACACGCTTAGTTGTGCTAAGTGTGGTGTGTCTTTGTGCTACAT
GTGGTGTGTGTGTGTCTATGTAGAGGGTCGGAGTTTGAGTAAGATCGTGT
CCGGGACGTTATGCTGAGCCTGGGCCGCTCGCGCGGGGGTGTGCTGGGAT
GTGCCGGTGGGAGAGGGGGCAGTGAGTGGTGAGAGGGCGGTGGCGGGGGT
GGCGCGAGCCTCGCGGCTGGGGGATCGGGCTGGTGGCCGGTGAGGGATGG
GGGGGCGGGAGGACGGGGTGAAGTGTTGCTAGATCGAGCACAGCCGTTCG
AGCGACGGGCGGGCGGGACCGGGCGGGAGGTGTTGGTGGGGGTCGGGGGG
GGGGGATTGGGGCGAAGGGCGGCGGCCGCGGCCGGCGGGGGTTGCGTGGA
TGACCCGGCGGGTGTGCGAGGGGACGAGTCGGACGCGGCAAGATATAGGT
GATATCGCTGTGGAGGTCAGGGTAAGTCTGGGCCGCACCGGGTCAGTATT
AGAGTTACCGCTGTAGAGC
back to top