EY728652

Overview
NameEY728652
Unique NameEY728652
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length869
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P1_ECOLI (Glyceraldehyde-3-phosphate dehydrogenase A OS=Escherichia coli (strain K12) GN=gapA PE=1 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 3.036e-38
Identity = 77/104 (74.04%), Postives = 93/104 (89.42%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 322
            GMAFRVPT +VSVVDLTVRLEK A+Y++IKAA+KA +EG++KG+LGYTEDDVVSTDF G+  +S+FDAKAGIAL+  FVKLVSWYDNE GYS +V+DLI H+SK
Sbjct:  228 GMAFRVPTPNVSVVDLTVRLEKAATYEQIKAAVKAAAEGEMKGVLGYTEDDVVSTDFNGEVCTSVFDAKAGIALNDNFVKLVSWYDNETGYSNKVLDLIAHISK 331          
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P1_ECOL6 (Glyceraldehyde-3-phosphate dehydrogenase A OS=Escherichia coli O6 GN=gapA PE=3 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 3.036e-38
Identity = 77/104 (74.04%), Postives = 93/104 (89.42%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 322
            GMAFRVPT +VSVVDLTVRLEK A+Y++IKAA+KA +EG++KG+LGYTEDDVVSTDF G+  +S+FDAKAGIAL+  FVKLVSWYDNE GYS +V+DLI H+SK
Sbjct:  228 GMAFRVPTPNVSVVDLTVRLEKAATYEQIKAAVKAAAEGEMKGVLGYTEDDVVSTDFNGEVCTSVFDAKAGIALNDNFVKLVSWYDNETGYSNKVLDLIAHISK 331          
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P1_ECO57 (Glyceraldehyde-3-phosphate dehydrogenase A OS=Escherichia coli O157:H7 GN=gapA PE=3 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 3.036e-38
Identity = 77/104 (74.04%), Postives = 93/104 (89.42%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 322
            GMAFRVPT +VSVVDLTVRLEK A+Y++IKAA+KA +EG++KG+LGYTEDDVVSTDF G+  +S+FDAKAGIAL+  FVKLVSWYDNE GYS +V+DLI H+SK
Sbjct:  228 GMAFRVPTPNVSVVDLTVRLEKAATYEQIKAAVKAAAEGEMKGVLGYTEDDVVSTDFNGEVCTSVFDAKAGIALNDNFVKLVSWYDNETGYSNKVLDLIAHISK 331          
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P_SCHMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.966e-38
Identity = 80/104 (76.92%), Postives = 89/104 (85.58%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 322
            GMAFRVPT DVSVVDLT RL K ASY+EIKAA+KA + G LKGIL YTED+VVS+DFVG + SSIFDAKAGI+L+  FVKLVSWYDNE+GYS RVVDLI HM K
Sbjct:  231 GMAFRVPTPDVSVVDLTCRLGKGASYEEIKAAVKAAASGPLKGILEYTEDEVVSSDFVGSTSSSIFDAKAGISLNNNFVKLVSWYDNEFGYSCRVVDLITHMHK 334          
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P2_SCHPO (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Schizosaccharomyces pombe GN=gpd3 PE=1 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.966e-38
Identity = 77/101 (76.24%), Postives = 87/101 (86.14%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVH 313
            GMAFRVPT DVSVVDLTV+L K  +Y++IKAAIKA SEG +KG+LGYTED VVSTDF GD+ SSIFDA AGI LS +FVKLVSWYDNEWGYS RVVDL+ +
Sbjct:  230 GMAFRVPTPDVSVVDLTVKLAKPTNYEDIKAAIKAASEGPMKGVLGYTEDSVVSTDFCGDNHSSIFDASAGIQLSPQFVKLVSWYDNEWGYSHRVVDLVAY 330          
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P_SCHCO (Glyceraldehyde-3-phosphate dehydrogenase OS=Schizophyllum commune GN=GPD PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 5.179e-38
Identity = 75/104 (72.12%), Postives = 90/104 (86.54%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 322
            G+AFRVPT+DVSVVDL VRLEK+ASYDEI A +K  SEG LKGILG+T++ VVSTDF G + SSIFD+KAGIA+SK FVKL++WYDNEWGYS RV DL+V+ +K
Sbjct:  229 GLAFRVPTLDVSVVDLVVRLEKEASYDEIVATVKEASEGPLKGILGFTDESVVSTDFTGANESSIFDSKAGIAISKSFVKLIAWYDNEWGYSRRVCDLLVYAAK 332          
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P_CRYCU (Glyceraldehyde-3-phosphate dehydrogenase OS=Cryptococcus curvatus GN=GPD PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 5.179e-38
Identity = 76/104 (73.08%), Postives = 90/104 (86.54%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 322
            GM+FR+PT DVSVVDL VRLEK ASYD+IK  IK  SEG+LKGILGYTED+VVSTDF+G + SS+FDAKAGI L+ KFVKL+SWYDNE+GYS RV DLI +++K
Sbjct:  229 GMSFRIPTSDVSVVDLVVRLEKGASYDQIKEVIKKASEGELKGILGYTEDEVVSTDFLGSTESSVFDAKAGIPLNDKFVKLISWYDNEYGYSRRVCDLIAYVAK 332          
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P_ASPNG (Glyceraldehyde-3-phosphate dehydrogenase OS=Aspergillus niger GN=gpdA PE=3 SV=2)

HSP 1 Score: 158.303 bits (399), Expect = 5.179e-38
Identity = 79/104 (75.96%), Postives = 87/104 (83.65%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 322
            GMA RVPT +VSVVDLT RLEK  SYDEIK A+K  SE +LKGILGYTEDD+VS+D  GD  SSIFDAKAGIAL+  FVKLVSWYDNEWGYS RVVDLI ++SK
Sbjct:  229 GMAMRVPTSNVSVVDLTCRLEKATSYDEIKKALKDASENELKGILGYTEDDIVSSDLNGDDHSSIFDAKAGIALNSNFVKLVSWYDNEWGYSRRVVDLIAYISK 332          
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P1_SCHPO (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Schizosaccharomyces pombe GN=tdh1 PE=1 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 5.179e-38
Identity = 77/101 (76.24%), Postives = 87/101 (86.14%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVH 313
            GMAFRVPT DVSVVDLTV+L K  +Y++IKAAIKA SEG +KG+LGYTED VVSTDF GD+ SSIFDA AGI LS +FVKLVSWYDNEWGYS RVVDL+ +
Sbjct:  230 GMAFRVPTPDVSVVDLTVKLAKPTNYEDIKAAIKAASEGPMKGVLGYTEDAVVSTDFCGDNHSSIFDASAGIQLSPQFVKLVSWYDNEWGYSRRVVDLVAY 330          
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P1_KLUMA (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Kluyveromyces marxianus GN=GAP1 PE=1 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 5.179e-38
Identity = 77/103 (74.76%), Postives = 91/103 (88.35%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMS 319
            GMAFRVPT DVSVVDLTV+L K A+YDEIKAA+K  SEGKLK ++GYTED VVS+DF+GD+ S+IFDA AGI LS KFVKLV+WYDNE+GYSTRVVDL+ H++
Sbjct:  227 GMAFRVPTTDVSVVDLTVKLVKAATYDEIKAAVKKVSEGKLKDVVGYTEDAVVSSDFLGDTHSTIFDAAAGIQLSPKFVKLVAWYDNEYGYSTRVVDLVEHVA 329          
The following BLAST results are available for this feature:
BLAST of EY728652 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 342
Match NameE-valueIdentityDescription
G3P1_ECOLI3.036e-3874.04Glyceraldehyde-3-phosphate dehydrogenase A OS=Esch... [more]
G3P1_ECOL63.036e-3874.04Glyceraldehyde-3-phosphate dehydrogenase A OS=Esch... [more]
G3P1_ECO573.036e-3874.04Glyceraldehyde-3-phosphate dehydrogenase A OS=Esch... [more]
G3P_SCHMA3.966e-3876.92Glyceraldehyde-3-phosphate dehydrogenase OS=Schist... [more]
G3P2_SCHPO3.966e-3876.24Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Schi... [more]
G3P_SCHCO5.179e-3872.12Glyceraldehyde-3-phosphate dehydrogenase OS=Schizo... [more]
G3P_CRYCU5.179e-3873.08Glyceraldehyde-3-phosphate dehydrogenase OS=Crypto... [more]
G3P_ASPNG5.179e-3875.96Glyceraldehyde-3-phosphate dehydrogenase OS=Asperg... [more]
G3P1_SCHPO5.179e-3876.24Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Schi... [more]
G3P1_KLUMA5.179e-3874.76Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Kluy... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-006-G01-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728652 ID=EY728652; Name=EY728652; organism=Citrus sinensis; type=EST; length=869bp
CACGCGTCCGGGTATGGCTTTCCGTGTACCCACTGTTGATGTCTCAGTGG
TTGACCTCACAGTGAGGCTGGAGAAGGATGCTTCTTATGATGAAATCAAA
GCTGCCATCAAGGCGGAGTCAGAGGGGAAACTAAAGGGTATCTTGGGATA
CACTGAGGATGATGTGGTATCCACCGACTTTGTTGGTGACAGTAGGTCAA
GTATCTTTGATGCCAAGGCTGGTATTGCTTTGAGTAAGAAATTTGTGAAG
CTTGTCTCATGGTATGACAATGAGTGGGGCTACAGTACTCGTGTGGTGGA
TTTGATTGTCCACATGTCGAAGACCCAGTAACTTACTCGGCGTGGCTTGA
GTATGTAACACGCTTAGTTGTGCTAAGTGTGGTGTGTCTTTGTGCTACAT
GTGGTGTGTGTGTGTCTATGTAGAGGGTCGGAGTTTGAGTAAGATCGTGT
CCGGGACGTTATGCTGAGCCTGGGCCGCTCGCGCGGGGGTGTGCTGGGAT
GTGCCGGTGGGAGAGGGGGCAGTGAGTGGTGAGAGGGCGGTGGCGGGGGT
GGCGCGAGCCTCGCGGCTGGGGGATCGGGCTGGTGGCCGGTGAGGGATGG
GGGGGCGGGAGGACGGGGTGAAGTGTTGCTAGATCGAGCACAGCCGTTCG
AGCGACGGGCGGGCGGGACCGGGCGGGAGGTGTTGGTGGGGGTCGGGGGG
GGGGGATTGGGGCGAAGGGCGGCGGCCGCGGCCGGCGGGGGTTGCGTGGA
TGACCCGGCGGGTGTGCGAGGGGACGAGTCGGACGCGGCAAGATATAGGT
GATATCGCTGTGGAGGTCAGGGTAAGTCTGGGCCGCACCGGGTCAGTATT
AGAGTTACCGCTGTAGAGC
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