EY728652

Overview
NameEY728652
Unique NameEY728652
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length869
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P_XENLA (Glyceraldehyde-3-phosphate dehydrogenase OS=Xenopus laevis GN=gapdh PE=2 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 6.765e-38
Identity = 78/106 (73.58%), Postives = 89/106 (83.96%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSKTQ 328
            GMAFRVPT +VSVVDLT RL+K A YD+IKAAIK  SEG +KGILGYT+D VVSTDF GD+ SSIFDA AGIAL++ FVKLVSWYDNE GYS RVVDL+ HM+  +
Sbjct:  228 GMAFRVPTPNVSVVDLTCRLQKPAKYDDIKAAIKTASEGPMKGILGYTQDQVVSTDFNGDTHSSIFDADAGIALNENFVKLVSWYDNECGYSNRVVDLVCHMASKE 333          
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P_USTMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Ustilago maydis GN=GAPD PE=3 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 8.835e-38
Identity = 77/104 (74.04%), Postives = 88/104 (84.62%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 322
            GMAFRVPT +VSVVDLT RLEK ASYDEIKA +K  SE +LKGILGYTED VVS DF+G+S SSIFDA AGI+L+  FVKLVSWYDNEWGYS R +DL+V M++
Sbjct:  230 GMAFRVPTTNVSVVDLTARLEKGASYDEIKAEVKRASENELKGILGYTEDAVVSQDFIGNSHSSIFDAAAGISLNNNFVKLVSWYDNEWGYSNRCLDLLVFMAQ 333          
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P_MONAN (Glyceraldehyde-3-phosphate dehydrogenase OS=Monascus anka GN=GPD1 PE=3 SV=3)

HSP 1 Score: 156.762 bits (395), Expect = 1.507e-37
Identity = 76/104 (73.08%), Postives = 88/104 (84.62%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 322
            GM+ RVPT +VSVVDLT RLEK A+YDEIK A+K  SEG LKG+LGYTEDDVVS+D  GD  SSIFDAKAGIAL+  FVKLVSWYDNEWGYS RV+DLI ++++
Sbjct:  230 GMSMRVPTSNVSVVDLTARLEKAATYDEIKQAVKEASEGPLKGVLGYTEDDVVSSDLNGDPHSSIFDAKAGIALNSNFVKLVSWYDNEWGYSRRVIDLIAYIAQ 333          
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P_DEBHA (Glyceraldehyde-3-phosphate dehydrogenase OS=Debaryomyces hansenii GN=GPD PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.507e-37
Identity = 78/104 (75.00%), Postives = 89/104 (85.58%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 322
            GM+ RVPTVDVSVVDLTVRL+K A+Y+EI  AIKA S G+LKGILGYTED VVSTDF+G   SSIFD KAGI LS  FVKL+SWYDNE+GYSTRVVDL+ H++K
Sbjct:  229 GMSLRVPTVDVSVVDLTVRLKKSATYEEISEAIKAASNGELKGILGYTEDAVVSTDFLGSDYSSIFDQKAGILLSPTFVKLISWYDNEFGYSTRVVDLLEHVAK 332          
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P_COLLN (Glyceraldehyde-3-phosphate dehydrogenase OS=Colletotrichum lindemuthianum GN=GPDA PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.507e-37
Identity = 74/104 (71.15%), Postives = 88/104 (84.62%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 322
            GM+ RVPT +VSVVDLTVR+EK A+YDEIK AIK  +EG LKG+L YTEDD VSTD +G+  SSIFDAKAGI+L+  FVKLVSWYDNEWGYS RV+DL+ H++K
Sbjct:  229 GMSMRVPTANVSVVDLTVRIEKGATYDEIKQAIKEAAEGPLKGVLAYTEDDFVSTDMIGNPNSSIFDAKAGISLNNNFVKLVSWYDNEWGYSRRVLDLLAHVAK 332          
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P_COLGL (Glyceraldehyde-3-phosphate dehydrogenase OS=Colletotrichum gloeosporioides GN=GPDA PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.571e-37
Identity = 74/103 (71.84%), Postives = 87/103 (84.47%), Query Frame = 2
Query:   14 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 322
            M+ RVPT +VSVVDLT R+EK ASYDEIK AIK  +EG LKG+L YTEDDVVSTD +G+  SSIFDAKAGI+L+  FVKLVSWYDNEWGYS RV+DL+ H++K
Sbjct:  231 MSMRVPTTNVSVVDLTARIEKGASYDEIKQAIKEAAEGPLKGVLAYTEDDVVSTDMIGNPNSSIFDAKAGISLNNNFVKLVSWYDNEWGYSRRVLDLLAHVAK 333          
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P_SCLSC (Glyceraldehyde-3-phosphate dehydrogenase OS=Sclerotinia sclerotiorum GN=GPD PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 3.357e-37
Identity = 77/104 (74.04%), Postives = 87/104 (83.65%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 322
            GM+ RVPT  VSVVDLTVR+EK ASYDEIK  IK  + G LKGIL YTEDDVVSTD  GD+ SSIFDAKAGI+L+K FVKLVSWYDNEWGYS RV+DL+ ++SK
Sbjct:  230 GMSMRVPTATVSVVDLTVRIEKAASYDEIKEVIKKAANGPLKGILAYTEDDVVSTDMNGDNHSSIFDAKAGISLNKNFVKLVSWYDNEWGYSRRVLDLLHYISK 333          
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P_PARBA (Glyceraldehyde-3-phosphate dehydrogenase OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=GPD PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 3.357e-37
Identity = 75/104 (72.12%), Postives = 89/104 (85.58%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 322
            GMA RVPT +VSVVDLT R EK  +YD+IKAA+KA SEG+LKGILGY+ED +VSTD  GD RSSIFDA AGIAL+ +FVKL+SWYDNEWGYS RV+DLI +++K
Sbjct:  230 GMAMRVPTANVSVVDLTCRTEKPVTYDQIKAAVKAASEGELKGILGYSEDALVSTDLNGDPRSSIFDASAGIALNDRFVKLISWYDNEWGYSRRVLDLIAYIAK 333          
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P_COTJA (Glyceraldehyde-3-phosphate dehydrogenase OS=Coturnix coturnix japonica GN=GAPDH PE=2 SV=2)

HSP 1 Score: 155.606 bits (392), Expect = 3.357e-37
Identity = 78/106 (73.58%), Postives = 87/106 (82.08%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSKTQ 328
            GMAFRVPT +VSVVDLT RLEK A YD+IK  +KA +EG LKGILGYTED VVS DF GDS SS FDA AGIAL+  FVKLVSWYDNE+GYS RVVDL+VHM+  +
Sbjct:  228 GMAFRVPTPNVSVVDLTCRLEKPAKYDDIKRVVKAAAEGPLKGILGYTEDQVVSCDFNGDSHSSTFDAGAGIALNDNFVKLVSWYDNEFGYSNRVVDLMVHMASKE 333          
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P_PICCI (Glyceraldehyde-3-phosphate dehydrogenase OS=Pichia ciferrii GN=GPD PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 4.385e-37
Identity = 74/103 (71.84%), Postives = 93/103 (90.29%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMS 319
            GM+ RVPTVDVSVVDLTV+L KDA+YDEIKAA+K  +EG LKG++GYTED VVS+DF+ D+RSSIFDA+AGI LS +FVKL++WYDNE+GYSTRVVDL+ +++
Sbjct:  229 GMSLRVPTVDVSVVDLTVKLLKDATYDEIKAAVKEAAEGPLKGVVGYTEDQVVSSDFLTDNRSSIFDAEAGIWLSPRFVKLIAWYDNEYGYSTRVVDLLEYVA 331          
The following BLAST results are available for this feature:
BLAST of EY728652 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 342
Match NameE-valueIdentityDescription
G3P_XENLA6.765e-3873.58Glyceraldehyde-3-phosphate dehydrogenase OS=Xenopu... [more]
G3P_USTMA8.835e-3874.04Glyceraldehyde-3-phosphate dehydrogenase OS=Ustila... [more]
G3P_MONAN1.507e-3773.08Glyceraldehyde-3-phosphate dehydrogenase OS=Monasc... [more]
G3P_DEBHA1.507e-3775.00Glyceraldehyde-3-phosphate dehydrogenase OS=Debary... [more]
G3P_COLLN1.507e-3771.15Glyceraldehyde-3-phosphate dehydrogenase OS=Collet... [more]
G3P_COLGL2.571e-3771.84Glyceraldehyde-3-phosphate dehydrogenase OS=Collet... [more]
G3P_SCLSC3.357e-3774.04Glyceraldehyde-3-phosphate dehydrogenase OS=Sclero... [more]
G3P_PARBA3.357e-3772.12Glyceraldehyde-3-phosphate dehydrogenase OS=Paraco... [more]
G3P_COTJA3.357e-3773.58Glyceraldehyde-3-phosphate dehydrogenase OS=Coturn... [more]
G3P_PICCI4.385e-3771.84Glyceraldehyde-3-phosphate dehydrogenase OS=Pichia... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-006-G01-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728652 ID=EY728652; Name=EY728652; organism=Citrus sinensis; type=EST; length=869bp
CACGCGTCCGGGTATGGCTTTCCGTGTACCCACTGTTGATGTCTCAGTGG
TTGACCTCACAGTGAGGCTGGAGAAGGATGCTTCTTATGATGAAATCAAA
GCTGCCATCAAGGCGGAGTCAGAGGGGAAACTAAAGGGTATCTTGGGATA
CACTGAGGATGATGTGGTATCCACCGACTTTGTTGGTGACAGTAGGTCAA
GTATCTTTGATGCCAAGGCTGGTATTGCTTTGAGTAAGAAATTTGTGAAG
CTTGTCTCATGGTATGACAATGAGTGGGGCTACAGTACTCGTGTGGTGGA
TTTGATTGTCCACATGTCGAAGACCCAGTAACTTACTCGGCGTGGCTTGA
GTATGTAACACGCTTAGTTGTGCTAAGTGTGGTGTGTCTTTGTGCTACAT
GTGGTGTGTGTGTGTCTATGTAGAGGGTCGGAGTTTGAGTAAGATCGTGT
CCGGGACGTTATGCTGAGCCTGGGCCGCTCGCGCGGGGGTGTGCTGGGAT
GTGCCGGTGGGAGAGGGGGCAGTGAGTGGTGAGAGGGCGGTGGCGGGGGT
GGCGCGAGCCTCGCGGCTGGGGGATCGGGCTGGTGGCCGGTGAGGGATGG
GGGGGCGGGAGGACGGGGTGAAGTGTTGCTAGATCGAGCACAGCCGTTCG
AGCGACGGGCGGGCGGGACCGGGCGGGAGGTGTTGGTGGGGGTCGGGGGG
GGGGGATTGGGGCGAAGGGCGGCGGCCGCGGCCGGCGGGGGTTGCGTGGA
TGACCCGGCGGGTGTGCGAGGGGACGAGTCGGACGCGGCAAGATATAGGT
GATATCGCTGTGGAGGTCAGGGTAAGTCTGGGCCGCACCGGGTCAGTATT
AGAGTTACCGCTGTAGAGC
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