EY728652

Overview
NameEY728652
Unique NameEY728652
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length869
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P_ASPOR (Glyceraldehyde-3-phosphate dehydrogenase OS=Aspergillus oryzae GN=gpdA PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 4.385e-37
Identity = 76/105 (72.38%), Postives = 90/105 (85.71%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESE-GKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 322
            GM+ RVPT +VSVVDLT R EK  +Y++IK  IKA SE G+LKGILGYTEDD+VSTD +GD+ SSIFDAKAGIAL++ F+KLVSWYDNEWGYS RVVDLI ++SK
Sbjct:  230 GMSMRVPTANVSVVDLTCRTEKAVTYEDIKKTIKAASEEGELKGILGYTEDDIVSTDLIGDAHSSIFDAKAGIALNEHFIKLVSWYDNEWGYSRRVVDLIAYISK 334          
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P3_KLUMA (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Kluyveromyces marxianus GN=GAP3 PE=1 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 4.385e-37
Identity = 76/104 (73.08%), Postives = 91/104 (87.50%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 322
            GMAFRVPTVDVSVVDLTV+L K A+Y+EIKA +K  SE +LKG++GYTED VVS+DF+GD+ SSIFDA AGI LS +FVKLVSWYDNE+GYSTRVVDL+  ++K
Sbjct:  227 GMAFRVPTVDVSVVDLTVKLAKPATYEEIKAVVKKASENELKGVMGYTEDAVVSSDFLGDTHSSIFDAAAGIQLSPQFVKLVSWYDNEFGYSTRVVDLVELVAK 330          
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P2_KLUMA (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Kluyveromyces marxianus GN=GAP2 PE=3 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 4.385e-37
Identity = 76/104 (73.08%), Postives = 91/104 (87.50%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 322
            GMAFRVPTVDVSVVDLTV+L K A+Y+EIKA +K  SE +LKG++GYTED VVS+DF+GD+ SSIFDA AGI LS +FVKLVSWYDNE+GYSTRVVDL+  ++K
Sbjct:  227 GMAFRVPTVDVSVVDLTVKLAKPATYEEIKAVVKKASENELKGVMGYTEDAVVSSDFLGDTHSSIFDAAAGIQLSPQFVKLVSWYDNEFGYSTRVVDLVELVAK 330          
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P_PODAN (Glyceraldehyde-3-phosphate dehydrogenase OS=Podospora anserina GN=GPD PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.727e-37
Identity = 75/104 (72.12%), Postives = 91/104 (87.50%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 322
            GMAFRVPT +VSVVDLT RLEK ASY+ IKAA+K  SEG+LKGILGYTED++VS+D  G++ SSIFDAKAGI+L+  FVKLVSWYDNEWGYS RV+DL+ +++K
Sbjct:  229 GMAFRVPTSNVSVVDLTCRLEKPASYETIKAALKEASEGELKGILGYTEDEIVSSDLNGNANSSIFDAKAGISLNDNFVKLVSWYDNEWGYSRRVLDLLSYVAK 332          
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P_OMPOL (Glyceraldehyde-3-phosphate dehydrogenase OS=Omphalotus olearius GN=GPD PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 7.479e-37
Identity = 74/104 (71.15%), Postives = 89/104 (85.58%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 322
            G++FRVPT+DVSVVDL VRLEK+A+YDEIKAA+K    G LKGIL YTED +VSTDF G++ SSIFDA AGIAL+K FVKL++WYDNEWGYS RVVDLI  +++
Sbjct:  229 GLSFRVPTLDVSVVDLVVRLEKEATYDEIKAAVKEAVAGPLKGILDYTEDALVSTDFTGNTHSSIFDASAGIALNKNFVKLIAWYDNEWGYSRRVVDLITFVAQ 332          
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P_CHICK (Glyceraldehyde-3-phosphate dehydrogenase OS=Gallus gallus GN=GAPDH PE=2 SV=3)

HSP 1 Score: 154.066 bits (388), Expect = 9.768e-37
Identity = 77/106 (72.64%), Postives = 87/106 (82.08%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSKTQ 328
            GMAFRVPT +VSVVDLT RLEK A YD+IK  +KA ++G LKGILGYTED VVS DF GDS SS FDA AGIAL+  FVKLVSWYDNE+GYS RVVDL+VHM+  +
Sbjct:  228 GMAFRVPTPNVSVVDLTCRLEKPAKYDDIKRVVKAAADGPLKGILGYTEDQVVSCDFNGDSHSSTFDAGAGIALNDHFVKLVSWYDNEFGYSNRVVDLMVHMASKE 333          
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P_YARLI (Glyceraldehyde-3-phosphate dehydrogenase OS=Yarrowia lipolytica GN=GPD PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.276e-36
Identity = 76/105 (72.38%), Postives = 92/105 (87.62%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEG-KLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 322
            GM+ RVPTVDVSVVDLTVR++  ASY++IKA +KA SE  +LKGILGYT++DVVSTDF+GD+ SSIFDAKAGI L+  FVKL+SWYDNE+GYS RVVDLIV ++K
Sbjct:  229 GMSLRVPTVDVSVVDLTVRIKNGASYEDIKATMKAASESPELKGILGYTDEDVVSTDFIGDTHSSIFDAKAGIGLNDNFVKLISWYDNEYGYSARVVDLIVAVAK 333          
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P1_TRIKO (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Trichoderma koningii GN=gpd1 PE=1 SV=3)

HSP 1 Score: 153.68 bits (387), Expect = 1.276e-36
Identity = 75/104 (72.12%), Postives = 88/104 (84.62%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 322
            GM+ RVPTV+VS+VD TVR  KD +YDE+KAAIK  SEG LKGIL YTEDD+VSTD + D  SS FDAKAGIAL+K FVK++SWYDNE+GYS RVVDLIV++SK
Sbjct:  228 GMSVRVPTVNVSLVDFTVRFAKDVTYDEVKAAIKEASEGPLKGILAYTEDDIVSTDILTDPHSSTFDAKAGIALNKNFVKVMSWYDNEYGYSRRVVDLIVYVSK 331          
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P_DANRE (Glyceraldehyde-3-phosphate dehydrogenase OS=Danio rerio GN=gapdh PE=2 SV=2)

HSP 1 Score: 153.295 bits (386), Expect = 1.666e-36
Identity = 76/106 (71.70%), Postives = 87/106 (82.08%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSKTQ 328
            GMAFRVPT +VSVVDLTVRLEK A YDEIK  +KA ++G +KGILGYTE  VVSTDF GD RSSIFDA AGIAL+  FVKLV+WYDNE+GYS RV DL+ HM+  +
Sbjct:  228 GMAFRVPTPNVSVVDLTVRLEKPAKYDEIKKVVKAAADGPMKGILGYTEHQVVSTDFNGDCRSSIFDAGAGIALNDHFVKLVTWYDNEFGYSNRVCDLMAHMASKE 333          
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P_GLOMM (Glyceraldehyde-3-phosphate dehydrogenase OS=Glossina morsitans morsitans GN=Gapdh PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.842e-36
Identity = 74/102 (72.55%), Postives = 88/102 (86.27%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHM 316
            GMAFRVPT +VSVVDLTVRL K A+YDEIKA +   S+G +KGIL YTE++VVSTDFVGD+ SS+FDAKAGI L+ KFVKL+SWYDNE+GYS RV+DLI +M
Sbjct:  227 GMAFRVPTPNVSVVDLTVRLGKSATYDEIKAKVLEASQGPMKGILDYTEEEVVSTDFVGDTHSSVFDAKAGIPLNDKFVKLISWYDNEFGYSNRVIDLIKYM 328          
The following BLAST results are available for this feature:
BLAST of EY728652 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 342
Match NameE-valueIdentityDescription
G3P_ASPOR4.385e-3772.38Glyceraldehyde-3-phosphate dehydrogenase OS=Asperg... [more]
G3P3_KLUMA4.385e-3773.08Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Kluy... [more]
G3P2_KLUMA4.385e-3773.08Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Kluy... [more]
G3P_PODAN5.727e-3772.12Glyceraldehyde-3-phosphate dehydrogenase OS=Podosp... [more]
G3P_OMPOL7.479e-3771.15Glyceraldehyde-3-phosphate dehydrogenase OS=Omphal... [more]
G3P_CHICK9.768e-3772.64Glyceraldehyde-3-phosphate dehydrogenase OS=Gallus... [more]
G3P_YARLI1.276e-3672.38Glyceraldehyde-3-phosphate dehydrogenase OS=Yarrow... [more]
G3P1_TRIKO1.276e-3672.12Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Tric... [more]
G3P_DANRE1.666e-3671.70Glyceraldehyde-3-phosphate dehydrogenase OS=Danio ... [more]
G3P_GLOMM2.842e-3672.55Glyceraldehyde-3-phosphate dehydrogenase OS=Glossi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-006-G01-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728652 ID=EY728652; Name=EY728652; organism=Citrus sinensis; type=EST; length=869bp
CACGCGTCCGGGTATGGCTTTCCGTGTACCCACTGTTGATGTCTCAGTGG
TTGACCTCACAGTGAGGCTGGAGAAGGATGCTTCTTATGATGAAATCAAA
GCTGCCATCAAGGCGGAGTCAGAGGGGAAACTAAAGGGTATCTTGGGATA
CACTGAGGATGATGTGGTATCCACCGACTTTGTTGGTGACAGTAGGTCAA
GTATCTTTGATGCCAAGGCTGGTATTGCTTTGAGTAAGAAATTTGTGAAG
CTTGTCTCATGGTATGACAATGAGTGGGGCTACAGTACTCGTGTGGTGGA
TTTGATTGTCCACATGTCGAAGACCCAGTAACTTACTCGGCGTGGCTTGA
GTATGTAACACGCTTAGTTGTGCTAAGTGTGGTGTGTCTTTGTGCTACAT
GTGGTGTGTGTGTGTCTATGTAGAGGGTCGGAGTTTGAGTAAGATCGTGT
CCGGGACGTTATGCTGAGCCTGGGCCGCTCGCGCGGGGGTGTGCTGGGAT
GTGCCGGTGGGAGAGGGGGCAGTGAGTGGTGAGAGGGCGGTGGCGGGGGT
GGCGCGAGCCTCGCGGCTGGGGGATCGGGCTGGTGGCCGGTGAGGGATGG
GGGGGCGGGAGGACGGGGTGAAGTGTTGCTAGATCGAGCACAGCCGTTCG
AGCGACGGGCGGGCGGGACCGGGCGGGAGGTGTTGGTGGGGGTCGGGGGG
GGGGGATTGGGGCGAAGGGCGGCGGCCGCGGCCGGCGGGGGTTGCGTGGA
TGACCCGGCGGGTGTGCGAGGGGACGAGTCGGACGCGGCAAGATATAGGT
GATATCGCTGTGGAGGTCAGGGTAAGTCTGGGCCGCACCGGGTCAGTATT
AGAGTTACCGCTGTAGAGC
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