EY728652

Overview
NameEY728652
Unique NameEY728652
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length869
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P_PHACH (Glyceraldehyde-3-phosphate dehydrogenase OS=Phanerochaete chrysosporium GN=GPD PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 8.269e-36
Identity = 76/104 (73.08%), Postives = 84/104 (80.77%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 322
            G+AFRVPTVDVSVVDL VRLEK ASYDEIK AIK  SE   KGILGYTE+ VVSTDF G+  SSIFD  AGIAL+K FVKL+SWYDNEWGYS R  DL+ + +K
Sbjct:  229 GLAFRVPTVDVSVVDLVVRLEKPASYDEIKQAIKEASETTHKGILGYTEEKVVSTDFTGNDNSSIFDRDAGIALNKTFVKLISWYDNEWGYSRRCCDLLGYAAK 332          
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P_NEUCR (Glyceraldehyde 3-phosphate-dehydrogenase OS=Neurospora crassa GN=gpd-1 PE=2 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 8.269e-36
Identity = 75/104 (72.12%), Postives = 86/104 (82.69%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 322
            GMA RVPT +VSVVDLT R+EK A+YDEIK  IK  SEG L GIL YTED+VVS+D  G+  SSIFDAKAGI+L+K FVKLVSWYDNEWGYS RV+DLI ++SK
Sbjct:  229 GMAMRVPTANVSVVDLTARIEKGATYDEIKEVIKKASEGPLAGILAYTEDEVVSSDMNGNPASSIFDAKAGISLNKNFVKLVSWYDNEWGYSRRVLDLISYISK 332          
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P_CRYPA (Glyceraldehyde-3-phosphate dehydrogenase OS=Cryphonectria parasitica PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 8.269e-36
Identity = 72/104 (69.23%), Postives = 88/104 (84.62%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 322
            GM+ RVPT +VSVVDLTVR+EK A+Y++IK A+K  ++G LKG+L YTEDDVVSTD  G+  SSIFDAKAGI+L+  FVKLVSWYDNEWGYS RV+DLI H++K
Sbjct:  229 GMSMRVPTSNVSVVDLTVRIEKGATYEQIKTAVKKAADGPLKGVLAYTEDDVVSTDMNGNPNSSIFDAKAGISLNDHFVKLVSWYDNEWGYSRRVLDLISHVAK 332          
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P_PIG (Glyceraldehyde-3-phosphate dehydrogenase OS=Sus scrofa GN=GAPDH PE=1 SV=4)

HSP 1 Score: 150.599 bits (379), Expect = 1.080e-35
Identity = 75/106 (70.75%), Postives = 85/106 (80.19%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSKTQ 328
            GMAFRVPT +VSVVDLT RLEK A YD+IK  +K  SEG LKGILGYTED VVS DF  D+ SS FDA AGIAL+  FVKL+SWYDNE+GYS RVVDL+VHM+  +
Sbjct:  228 GMAFRVPTPNVSVVDLTCRLEKPAKYDDIKKVVKQASEGPLKGILGYTEDQVVSCDFNSDTHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDLMVHMASKE 333          
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P_TRIAT (Glyceraldehyde-3-phosphate dehydrogenase OS=Trichoderma atroviride GN=gpd1 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.411e-35
Identity = 70/104 (67.31%), Postives = 90/104 (86.54%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 322
            GM+FRVP+ +VSV+DLTVRLEK ASY+EI +AIK  ++G+LKGI+ YT D+VVSTD +G++ SSIFD KAGI+L+  FVKLVSWYDNEWGYS RV+DL+ H++K
Sbjct:  229 GMSFRVPSANVSVIDLTVRLEKAASYEEITSAIKKAADGELKGIMAYTSDEVVSTDMLGNNNSSIFDIKAGISLNPNFVKLVSWYDNEWGYSRRVLDLLEHVAK 332          
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P_SPECI (Glyceraldehyde-3-phosphate dehydrogenase OS=Spermophilus citellus GN=GAPDH PE=2 SV=3)

HSP 1 Score: 150.214 bits (378), Expect = 1.411e-35
Identity = 75/106 (70.75%), Postives = 85/106 (80.19%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSKTQ 328
            GMAFRVPT +VSVVDLT RLEK A YD+IK  +K  SEG LKGILGYTED VVS DF  D+ SS FDA AGIAL+  FVKL+SWYDNE+GYS RVVDL+VHM+  +
Sbjct:  228 GMAFRVPTPNVSVVDLTCRLEKAAKYDDIKKVVKQASEGPLKGILGYTEDQVVSCDFNSDTHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDLMVHMASKE 333          
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3PC_CHOCR (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Chondrus crispus GN=GAPC PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.411e-35
Identity = 72/106 (67.92%), Postives = 85/106 (80.19%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSKTQ 328
            GMAFRVPT DVSVVDLTVRL  + +Y++IKA +KA ++  +KGI+ YTED VVSTDF+ D  S IFDA AGI L+ KF KLV+WYDNEWGYS RVVDLI H+SK Q
Sbjct:  230 GMAFRVPTPDVSVVDLTVRLASETTYEDIKATMKAAADDSMKGIMKYTEDAVVSTDFIHDDASCIFDASAGIMLNSKFCKLVAWYDNEWGYSNRVVDLIAHISKVQ 335          
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P_RALSO (Glyceraldehyde-3-phosphate dehydrogenase OS=Ralstonia solanacearum GN=gapA PE=3 SV=2)

HSP 1 Score: 149.443 bits (376), Expect = 2.406e-35
Identity = 71/98 (72.45%), Postives = 86/98 (87.76%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDL 304
            GM+FRVPT DVSVVDLTV LEK ASYDEI A +KA+S+G LKG+LGYTED VV+TDF GD+R+SIFDA+AGIAL   F+K+VSWYDNEWGYS +V+++
Sbjct:  229 GMSFRVPTSDVSVVDLTVELEKAASYDEICAEMKAQSQGALKGVLGYTEDKVVATDFRGDARTSIFDAEAGIALDGTFIKVVSWYDNEWGYSNKVLEM 326          
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3PT_MACFA (Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Macaca fascicularis GN=GAPDHS PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 3.142e-35
Identity = 75/102 (73.53%), Postives = 85/102 (83.33%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHM 316
            GMAFRVPT DVSVVDLT RL + A Y  IK AIKA ++G + GIL YTED+VVSTDFVGDS SSIFDAKAGIAL+  FVKL+SWYDNE+GYS RVVDL+ +M
Sbjct:  303 GMAFRVPTPDVSVVDLTCRLAQPAPYSAIKEAIKAAAKGPMAGILAYTEDEVVSTDFVGDSHSSIFDAKAGIALNDNFVKLISWYDNEYGYSHRVVDLLRYM 404          
BLAST of EY728652 vs. ExPASy Swiss-Prot
Match: G3P2_TRIKO (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Trichoderma koningii GN=gpd2 PE=1 SV=3)

HSP 1 Score: 149.058 bits (375), Expect = 3.142e-35
Identity = 70/104 (67.31%), Postives = 87/104 (83.65%), Query Frame = 2
Query:   11 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 322
            GM+ RVPT +VSVVDLTVR+EK ASY+EI   IK  ++G LKG+L YT DDVVS+D +G++ SSIFD KAGI+L+K FVKLVSWYDNEWGYS RV+DL+ H++K
Sbjct:  230 GMSIRVPTANVSVVDLTVRIEKGASYEEITETIKKAADGPLKGVLAYTGDDVVSSDMLGNTNSSIFDIKAGISLNKNFVKLVSWYDNEWGYSRRVLDLLAHVAK 333          
The following BLAST results are available for this feature:
BLAST of EY728652 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 342
Match NameE-valueIdentityDescription
G3P_PHACH8.269e-3673.08Glyceraldehyde-3-phosphate dehydrogenase OS=Phaner... [more]
G3P_NEUCR8.269e-3672.12Glyceraldehyde 3-phosphate-dehydrogenase OS=Neuros... [more]
G3P_CRYPA8.269e-3669.23Glyceraldehyde-3-phosphate dehydrogenase OS=Crypho... [more]
G3P_PIG1.080e-3570.75Glyceraldehyde-3-phosphate dehydrogenase OS=Sus sc... [more]
G3P_TRIAT1.411e-3567.31Glyceraldehyde-3-phosphate dehydrogenase OS=Tricho... [more]
G3P_SPECI1.411e-3570.75Glyceraldehyde-3-phosphate dehydrogenase OS=Spermo... [more]
G3PC_CHOCR1.411e-3567.92Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P_RALSO2.406e-3572.45Glyceraldehyde-3-phosphate dehydrogenase OS=Ralsto... [more]
G3PT_MACFA3.142e-3573.53Glyceraldehyde-3-phosphate dehydrogenase, testis-s... [more]
G3P2_TRIKO3.142e-3567.31Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Tric... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-006-G01-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728652 ID=EY728652; Name=EY728652; organism=Citrus sinensis; type=EST; length=869bp
CACGCGTCCGGGTATGGCTTTCCGTGTACCCACTGTTGATGTCTCAGTGG
TTGACCTCACAGTGAGGCTGGAGAAGGATGCTTCTTATGATGAAATCAAA
GCTGCCATCAAGGCGGAGTCAGAGGGGAAACTAAAGGGTATCTTGGGATA
CACTGAGGATGATGTGGTATCCACCGACTTTGTTGGTGACAGTAGGTCAA
GTATCTTTGATGCCAAGGCTGGTATTGCTTTGAGTAAGAAATTTGTGAAG
CTTGTCTCATGGTATGACAATGAGTGGGGCTACAGTACTCGTGTGGTGGA
TTTGATTGTCCACATGTCGAAGACCCAGTAACTTACTCGGCGTGGCTTGA
GTATGTAACACGCTTAGTTGTGCTAAGTGTGGTGTGTCTTTGTGCTACAT
GTGGTGTGTGTGTGTCTATGTAGAGGGTCGGAGTTTGAGTAAGATCGTGT
CCGGGACGTTATGCTGAGCCTGGGCCGCTCGCGCGGGGGTGTGCTGGGAT
GTGCCGGTGGGAGAGGGGGCAGTGAGTGGTGAGAGGGCGGTGGCGGGGGT
GGCGCGAGCCTCGCGGCTGGGGGATCGGGCTGGTGGCCGGTGAGGGATGG
GGGGGCGGGAGGACGGGGTGAAGTGTTGCTAGATCGAGCACAGCCGTTCG
AGCGACGGGCGGGCGGGACCGGGCGGGAGGTGTTGGTGGGGGTCGGGGGG
GGGGGATTGGGGCGAAGGGCGGCGGCCGCGGCCGGCGGGGGTTGCGTGGA
TGACCCGGCGGGTGTGCGAGGGGACGAGTCGGACGCGGCAAGATATAGGT
GATATCGCTGTGGAGGTCAGGGTAAGTCTGGGCCGCACCGGGTCAGTATT
AGAGTTACCGCTGTAGAGC
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