EY728643

Overview
NameEY728643
Unique NameEY728643
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728643 vs. ExPASy Swiss-Prot
Match: GAL1_ECO55 (Galactokinase OS=Escherichia coli (strain 55989 / EAEC) GN=galK PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.596e-13
Identity = 54/198 (27.27%), Postives = 92/198 (46.46%), Query Frame = 2
Query:   95 DNLNSKFIQVFAQPPDVYARSPGRVNLIGEHIDYEGYSVLPMAIRQDAIVAIRKHDSKEAEKVLKIANVSDKYNMCTYPAEPDQEIDMKHHQWGHYFICGYKAFYEYVKAKGLDVGPPVGLDILVDGTVPTGSGLSSSTAFVCSSTVALMAAFGVEVPKKEIAQLTCECE-QYIGTQSGGMDXAISIMAQSGFAELIE 685
            +   S F   F  P     ++PGRVNLIGEH DY    VLP AI    +++    D ++   +      +D  N     +     +  +++QW +Y     +   ++++ +    G   G+D+++ G VP G+GLSSS +   +    L   + + +   +IA    E E Q++G   G MD  IS + +   A LI+
Sbjct:    5 EKTQSLFANAFGYPATHTIQAPGRVNLIGEHTDYNDGFVLPCAIDYQTVISCAPRDDRKVRVM-----AADYENQLDEFSLDAPIVAHENYQWANY----VRGVVKHLQLRNNSFG---GVDMVISGNVPQGAGLSSSASLEVAVGTVLQQLYHLPLDGAQIALNGQEAENQFVGCNCGIMDQLISALGKKDHALLID 190          
BLAST of EY728643 vs. ExPASy Swiss-Prot
Match: GAL1_ECO45 (Galactokinase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=galK PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.596e-13
Identity = 54/198 (27.27%), Postives = 92/198 (46.46%), Query Frame = 2
Query:   95 DNLNSKFIQVFAQPPDVYARSPGRVNLIGEHIDYEGYSVLPMAIRQDAIVAIRKHDSKEAEKVLKIANVSDKYNMCTYPAEPDQEIDMKHHQWGHYFICGYKAFYEYVKAKGLDVGPPVGLDILVDGTVPTGSGLSSSTAFVCSSTVALMAAFGVEVPKKEIAQLTCECE-QYIGTQSGGMDXAISIMAQSGFAELIE 685
            +   S F   F  P     ++PGRVNLIGEH DY    VLP AI    +++    D ++   +      +D  N     +     +  +++QW +Y     +   ++++ +    G   G+D+++ G VP G+GLSSS +   +    L   + + +   +IA    E E Q++G   G MD  IS + +   A LI+
Sbjct:    5 EKTQSLFANAFGYPATHTIQAPGRVNLIGEHTDYNDGFVLPCAIDYQTVISCAPRDDRKVRVM-----AADYENQLDEFSLDAPIVAHENYQWANY----VRGVVKHLQLRNNSFG---GVDMVISGNVPQGAGLSSSASLEVAVGTVLQQLYHLPLDGAQIALNGQEAENQFVGCNCGIMDQLISALGKKDHALLID 190          
BLAST of EY728643 vs. ExPASy Swiss-Prot
Match: GAL1_ECO27 (Galactokinase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=galK PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.596e-13
Identity = 54/198 (27.27%), Postives = 92/198 (46.46%), Query Frame = 2
Query:   95 DNLNSKFIQVFAQPPDVYARSPGRVNLIGEHIDYEGYSVLPMAIRQDAIVAIRKHDSKEAEKVLKIANVSDKYNMCTYPAEPDQEIDMKHHQWGHYFICGYKAFYEYVKAKGLDVGPPVGLDILVDGTVPTGSGLSSSTAFVCSSTVALMAAFGVEVPKKEIAQLTCECE-QYIGTQSGGMDXAISIMAQSGFAELIE 685
            +   S F   F  P     ++PGRVNLIGEH DY    VLP AI    +++    D ++   +      +D  N     +     +  +++QW +Y     +   ++++ +    G   G+D+++ G VP G+GLSSS +   +    L   + + +   +IA    E E Q++G   G MD  IS + +   A LI+
Sbjct:    5 EKTQSLFANAFGYPATRTIQAPGRVNLIGEHTDYNDGFVLPCAIDYQTVISCAPRDDRKVRVM-----AADYENQLDEFSLDAPIVAHENYQWANY----VRGVVKHLQLRNNSFG---GVDMVISGNVPQGAGLSSSASLEVAVGTVLQQLYHLPLDGAQIALNGQEAENQFVGCNCGIMDQLISALGKKDHALLID 190          
BLAST of EY728643 vs. ExPASy Swiss-Prot
Match: GAL1_ECO24 (Galactokinase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=galK PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.596e-13
Identity = 54/198 (27.27%), Postives = 92/198 (46.46%), Query Frame = 2
Query:   95 DNLNSKFIQVFAQPPDVYARSPGRVNLIGEHIDYEGYSVLPMAIRQDAIVAIRKHDSKEAEKVLKIANVSDKYNMCTYPAEPDQEIDMKHHQWGHYFICGYKAFYEYVKAKGLDVGPPVGLDILVDGTVPTGSGLSSSTAFVCSSTVALMAAFGVEVPKKEIAQLTCECE-QYIGTQSGGMDXAISIMAQSGFAELIE 685
            +   S F   F  P     ++PGRVNLIGEH DY    VLP AI    +++    D ++   +      +D  N     +     +  +++QW +Y     +   ++++ +    G   G+D+++ G VP G+GLSSS +   +    L   + + +   +IA    E E Q++G   G MD  IS + +   A LI+
Sbjct:    5 EKTQSLFANAFGYPATHTIQAPGRVNLIGEHTDYNDGFVLPCAIDYQTVISCAPRDDRKVRVM-----AADYENQLDEFSLDAPIVAHENYQWANY----VRGVVKHLQLRNNSFG---GVDMVISGNVPQGAGLSSSASLEVAVGTVLQQLYHLPLDGAQIALNGQEAENQFVGCNCGIMDQLISALGKKDHALLID 190          
BLAST of EY728643 vs. ExPASy Swiss-Prot
Match: GAL1_THEAB (Galactokinase OS=Thermosipho africanus (strain TCF52B) GN=galK PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.085e-13
Identity = 54/183 (29.51%), Postives = 89/183 (48.63%), Query Frame = 2
Query:  152 RSPGRVNLIGEHIDYEGYSVLPMAIRQDAIVAIRKHDSKEAEKVLKIANVSDKYNMCTYPAEPDQEIDM----KHHQWGHYFICGYKAFYEYVKAKGLDVGPPVGLDILVDGTVPTGSGLSSSTAFVCSSTVALMAAFGVEVPKKEIAQLTCECE-QYIGTQSGGMDXAISIMAQSGFAELIE 685
            ++PGRVNLIGEH DY    VLP AI +   + I +               SDK+  C Y    ++E+ +    K + W  Y +       + ++ +G  + P   + I VD  +P G+GLSSS A   +S  A+   FG+ + K +I +++ E E  ++G   G MD   S  ++  +A  ++
Sbjct:    4 KAPGRVNLIGEHTDYNDGFVLPFAIDRYVELEIEE---------------SDKF--CFYSNNLNEEVKLSSLQKTNSWADYIV----GVIKEIEKRGYKIQP---VKIKVDSNIPIGAGLSSSAALEVASAYAISEYFGLNLSKIDIVKISREAEANFVGVNCGIMDQFASAFSKKDYAIFLD 162          
BLAST of EY728643 vs. ExPASy Swiss-Prot
Match: GAL1_SHISS (Galactokinase OS=Shigella sonnei (strain Ss046) GN=galK PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.085e-13
Identity = 54/198 (27.27%), Postives = 92/198 (46.46%), Query Frame = 2
Query:   95 DNLNSKFIQVFAQPPDVYARSPGRVNLIGEHIDYEGYSVLPMAIRQDAIVAIRKHDSKEAEKVLKIANVSDKYNMCTYPAEPDQEIDMKHHQWGHYFICGYKAFYEYVKAKGLDVGPPVGLDILVDGTVPTGSGLSSSTAFVCSSTVALMAAFGVEVPKKEIAQLTCECE-QYIGTQSGGMDXAISIMAQSGFAELIE 685
            +   S F   F  P     ++PGRVNLIGEH DY    VLP AI    +++    D ++   +      +D  N     +     +  +++QW +Y     +   ++++ +    G   G+D+++ G VP G+GLSSS +   +    L   + + +   +IA    E E Q++G   G MD  IS + +   A LI+
Sbjct:    5 EKTQSLFANAFGYPATHTIQAPGRVNLIGEHTDYNDGFVLPCAIDYQTVISCAPRDDRKVRVM-----AADYENQLDEFSLNAPIVAHENYQWANY----VRGVVKHLQLRNNSFG---GVDMVISGNVPQGAGLSSSASLEVAVGTVLQQLYHLPLDGAQIALNGQEAENQFVGCNCGIMDQLISALGKKDHALLID 190          
BLAST of EY728643 vs. ExPASy Swiss-Prot
Match: GAL1_SHIFL (Galactokinase OS=Shigella flexneri GN=galK PE=3 SV=3)

HSP 1 Score: 76.6406 bits (187), Expect = 2.085e-13
Identity = 54/198 (27.27%), Postives = 92/198 (46.46%), Query Frame = 2
Query:   95 DNLNSKFIQVFAQPPDVYARSPGRVNLIGEHIDYEGYSVLPMAIRQDAIVAIRKHDSKEAEKVLKIANVSDKYNMCTYPAEPDQEIDMKHHQWGHYFICGYKAFYEYVKAKGLDVGPPVGLDILVDGTVPTGSGLSSSTAFVCSSTVALMAAFGVEVPKKEIAQLTCECE-QYIGTQSGGMDXAISIMAQSGFAELIE 685
            +   S F   F  P     ++PGRVNLIGEH DY    VLP AI    +++    D ++   +      +D  N     +     +  +++QW +Y     +   ++++ +    G   G+D+++ G VP G+GLSSS +   +    L   + + +   +IA    E E Q++G   G MD  IS + +   A LI+
Sbjct:    5 EKTQSLFANAFGYPATHTIQAPGRVNLIGEHTDYNDGFVLPCAIDYQTVISCAPRDDRKVRVM-----AADYENQLDEFSLNAPIVAHENYQWANY----VRGVVKHLQLRNNSFG---GVDMVISGNVPQGAGLSSSASLEVAVGTVLQQLYHLPLDGAQIALNGQEAENQFVGCNCGIMDQLISALGKKDHALLID 190          
BLAST of EY728643 vs. ExPASy Swiss-Prot
Match: GAL1_SHIF8 (Galactokinase OS=Shigella flexneri serotype 5b (strain 8401) GN=galK PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.085e-13
Identity = 54/198 (27.27%), Postives = 92/198 (46.46%), Query Frame = 2
Query:   95 DNLNSKFIQVFAQPPDVYARSPGRVNLIGEHIDYEGYSVLPMAIRQDAIVAIRKHDSKEAEKVLKIANVSDKYNMCTYPAEPDQEIDMKHHQWGHYFICGYKAFYEYVKAKGLDVGPPVGLDILVDGTVPTGSGLSSSTAFVCSSTVALMAAFGVEVPKKEIAQLTCECE-QYIGTQSGGMDXAISIMAQSGFAELIE 685
            +   S F   F  P     ++PGRVNLIGEH DY    VLP AI    +++    D ++   +      +D  N     +     +  +++QW +Y     +   ++++ +    G   G+D+++ G VP G+GLSSS +   +    L   + + +   +IA    E E Q++G   G MD  IS + +   A LI+
Sbjct:    5 EKTQSLFANAFGYPATHTIQAPGRVNLIGEHTDYNDGFVLPCAIDYQTVISCAPRDDRKVRVM-----AADYENQLDEFSLNAPIVAHENYQWANY----VRGVVKHLQLRNNSFG---GVDMVISGNVPQGAGLSSSASLEVAVGTVLQQLYHLPLDGAQIALNGQEAENQFVGCNCGIMDQLISALGKKDHALLID 190          
BLAST of EY728643 vs. ExPASy Swiss-Prot
Match: GAL1_SHIBS (Galactokinase OS=Shigella boydii serotype 4 (strain Sb227) GN=galK PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.085e-13
Identity = 54/198 (27.27%), Postives = 92/198 (46.46%), Query Frame = 2
Query:   95 DNLNSKFIQVFAQPPDVYARSPGRVNLIGEHIDYEGYSVLPMAIRQDAIVAIRKHDSKEAEKVLKIANVSDKYNMCTYPAEPDQEIDMKHHQWGHYFICGYKAFYEYVKAKGLDVGPPVGLDILVDGTVPTGSGLSSSTAFVCSSTVALMAAFGVEVPKKEIAQLTCECE-QYIGTQSGGMDXAISIMAQSGFAELIE 685
            +   S F   F  P     ++PGRVNLIGEH DY    VLP AI    +++    D ++   +      +D  N     +     +  +++QW +Y     +   ++++ +    G   G+D+++ G VP G+GLSSS +   +    L   + + +   +IA    E E Q++G   G MD  IS + +   A LI+
Sbjct:    5 EKTQSLFANAFGYPATHTIQAPGRVNLIGEHTDYNDGFVLPCAIDYQTVISCAPRDDRKVRVM-----AADYENQLDEFSLNAPIVAHENYQWANY----VRGVVKHLQLRNNSFG---GVDMVISGNVPQGAGLSSSASLEVAVGTVLQQLYHLPLDGAQIALNGQEAENQFVGCNCGIMDQLISALGKKDHALLID 190          
BLAST of EY728643 vs. ExPASy Swiss-Prot
Match: GAL1_ECOSM (Galactokinase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=galK PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.085e-13
Identity = 54/198 (27.27%), Postives = 92/198 (46.46%), Query Frame = 2
Query:   95 DNLNSKFIQVFAQPPDVYARSPGRVNLIGEHIDYEGYSVLPMAIRQDAIVAIRKHDSKEAEKVLKIANVSDKYNMCTYPAEPDQEIDMKHHQWGHYFICGYKAFYEYVKAKGLDVGPPVGLDILVDGTVPTGSGLSSSTAFVCSSTVALMAAFGVEVPKKEIAQLTCECE-QYIGTQSGGMDXAISIMAQSGFAELIE 685
            +   S F   F  P     ++PGRVNLIGEH DY    VLP AI    +++    D ++   +      +D  N     +     +  + +QW +Y     +   ++++ +  + G   G+D+++ G VP G+GLSSS +   +    L   + + +   +IA    E E Q++G   G MD  IS + +   A LI+
Sbjct:    5 EKTQSLFANAFGYPATHTIQAPGRVNLIGEHTDYNDGFVLPCAIDYQTVISCAPRDDRKVRVM-----AADYENQLDEFSLDAPIVAHESYQWANY----VRGVVKHLQLRNNNFG---GVDMVISGNVPQGAGLSSSASLEVAVGTVLQQLYHLPLDGAQIALNGQEAENQFVGCNCGIMDQLISALGKKDHALLID 190          
The following BLAST results are available for this feature:
BLAST of EY728643 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 120
Match NameE-valueIdentityDescription
GAL1_ECO551.596e-1327.27Galactokinase OS=Escherichia coli (strain 55989 / ... [more]
GAL1_ECO451.596e-1327.27Galactokinase OS=Escherichia coli O45:K1 (strain S... [more]
GAL1_ECO271.596e-1327.27Galactokinase OS=Escherichia coli O127:H6 (strain ... [more]
GAL1_ECO241.596e-1327.27Galactokinase OS=Escherichia coli O139:H28 (strain... [more]
GAL1_THEAB2.085e-1329.51Galactokinase OS=Thermosipho africanus (strain TCF... [more]
GAL1_SHISS2.085e-1327.27Galactokinase OS=Shigella sonnei (strain Ss046) GN... [more]
GAL1_SHIFL2.085e-1327.27Galactokinase OS=Shigella flexneri GN=galK PE=3 SV... [more]
GAL1_SHIF82.085e-1327.27Galactokinase OS=Shigella flexneri serotype 5b (st... [more]
GAL1_SHIBS2.085e-1327.27Galactokinase OS=Shigella boydii serotype 4 (strai... [more]
GAL1_ECOSM2.085e-1327.27Galactokinase OS=Escherichia coli (strain SMS-3-5 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-006-F02-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728643 ID=EY728643; Name=EY728643; organism=Citrus sinensis; type=EST; length=897bp
CACGCGTCCGGAAGAATTACCAGTGCCGACTTTTTGGTCACTGCAGGCAG
TGTACGGAGAAGGATTGCAGCTGGAAGAGGCTGAACGTCGTTTCGATAAC
TTGAATTCAAAGTTCATTCAAGTCTTTGCTCAGCCTCCCGATGTCTACGC
GCGATCTCCAGGGAGAGTGAACTTGATTGGGGAGCATATTGATTATGAAG
GATATTCTGTACTGCCAATGGCGATTCGGCAAGACGCAATCGTGGCAATA
AGGAAGCACGATTCAAAAGAGGCTGAAAAGGTTCTTAAAATAGCTAATGT
TAGTGACAAGTACAATATGTGTACTTATCCTGCTGAACCTGATCAGGAAA
TTGACATGAAGCATCATCAATGGGGCCACTATTTCATTTGTGGATATAAA
GCTTTTTATGAATATGTTAAAGCTAAAGGATTGGATGTTGGTCCACCGGT
TGGACTTGATATTCTTGTTGATGGCACGGTTCCAACAGGTTCTGGGCTAT
CCAGCTCCACAGCATTTGTTTGCTCTTCAACGGTTGCTCTTATGGCTGCT
TTCGGCGTGGAAGTTCCAAAGAAAGAGATTGCGCAACTTACATGTGAATG
TGAACAATATATTGGAACACAGTCTGGTGGAATGGACCANGCAATCTCTA
TCATGGCCCAATCTGGGTTTGCTGAGCTGATTGAGTTCACCCTATTCGAA
CAACTGATGTGCCACTTCCTGCTGGAGGTACTTTTGGGGGTACCCATTCC
TTGGGAGAATCTCTGAAGGCTATACTGCTGGTTCAAATACAATACAAAGT
GGTTGAATGCGATTGATGGTATTGTCCTGCAAAAANCTTGGGATGGAACC
CAGAGGGAGATCAAAAGTGAAACTTTTCGGAGTTTAAAGGGTGTGTT
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