EY728614
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA_BURCA (Choline dehydrogenase OS=Burkholderia cenocepacia (strain AU 1054) GN=betA PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 2.164e-37 Identity = 87/224 (38.84%), Postives = 123/224 (54.91%), Query Frame = -1 Query: 3 PAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARITPGFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMGVDEMA 674 P ++ +G+G LK L + PGVG+ LQDH+ + IQY K+ VS AL + +G WM +GLGASN+FE G F R D + N+++ FLP+ + A GFQ MR SRG V S+DP P I N++ D + R+ +R TRE++ Q + D RG EL+PG +SD EL+A++R A T FH +C+MG D+MA Sbjct: 265 PQLLQRSGVGPGAWLKELDIPVVLDLPGVGQNLQDHLEMYIQYEC-KEPVSLYPALKWWNQPKIGLEWMLNGTGLGASNHFEAGGFIRTRDDDPWPNIQYHFLPVAINYNGSNAIEMHGFQAHVGSMRSPSRGRVKLRSRDPNDHPSILFNYMAEALDWREFRDAIRATREIMRQPALDRYRGRELNPGADCKSDKELDAFVRARAETAFHPSCSCKMGYDDMA 487
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA_VIBVY (Choline dehydrogenase OS=Vibrio vulnificus (strain YJ016) GN=betA PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.826e-37 Identity = 81/230 (35.22%), Postives = 128/230 (55.65%), Query Frame = -1 Query: 9 SSVRSLRFPAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARITPGFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMGVDE 698 SS S+ ++ L+GIG L+ G +H PGVG+ LQDH+ V QY K ++ L + +G W+ R GLGA+N+FE AF R +++ N+++ FLP + A GFQ +P SRG V S +P P I+ N+L+ D + R+ +R TRE++AQ + DE RGEE+ PG ++ +DAE++ W+++N + +H +C+MG D+ Sbjct: 253 SSAGSIGSVQLLQLSGIGPKTVLEKAGVTPVYHLPGVGQNLQDHLEVYFQYHCQKP-ITLNGKLDWFSKGLIGTEWILTRKGLGATNHFESCAFIRSRAGLKWPNIQYHFLPAAMRYDGQAAFDGHGFQVHVGPNKPESRGRVEIVSANPLDKPKIQFNYLSTERDRQDWRDCIRLTREILAQPAMDEFRGEEIQPGINVATDAEIDQWVKENVESAYHPSCSCKMGADD 481
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA_STRM5 (Choline dehydrogenase OS=Stenotrophomonas maltophilia (strain R551-3) GN=betA PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.691e-37 Identity = 80/219 (36.53%), Postives = 124/219 (56.62%), Query Frame = -1 Query: 18 PAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARITPGFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMG 674 P ++ +G+G D L+ L +L HH PGVG LQDH+ + +QY K+ VS AL + +GA W+ +G+GASN FE G F R + + ++ NL++ FLP+ + FQ MR SRG + SKDP+ P I N+++ D + R +R TRE+ AQ + G E+SPG LQ+DA+++A++R++A T +H + +MG Sbjct: 266 PQILQRSGVGPADLLRSLDIDLVHHLPGVGANLQDHLEMYLQYEC-KKPVSLAPALKLYNQPAIGAEWLFLGTGIGASNQFEAGGFIRSDTEFDWPNLQYHFLPVAINYNGSNPIKAHSFQMHVGSMRSPSRGRIHVRSKDPREHPSILFNYMSHDQDWREFRAAIRITREIFAQPALAPYSGREISPGSALQTDAQIDAFVREHAETAYHPSCSNKMG 483
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA_BURS3 (Choline dehydrogenase OS=Burkholderia sp. (strain 383) GN=betA PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.691e-37 Identity = 87/224 (38.84%), Postives = 123/224 (54.91%), Query Frame = -1 Query: 3 PAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARITPGFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMGVDEMA 674 P ++ +G+G LK L + PGVG+ LQDH+ + IQY K+ VS AL + +G WM +GLGASN+FE G F R D + N+++ FLP+ + A GFQ MR SRG V S+DP P I N++ D + R+ +R TRE++ Q + D RG EL+PG +SD EL+A++R A T FH +C+MG D+MA Sbjct: 265 PQLLQRSGVGPGAWLKELDIPVVLDLPGVGQNLQDHLEMYIQYEC-KEPVSLYPALKWWNQPKIGLEWMLNGTGLGASNHFEAGGFIRTRDDDLWPNIQYHFLPVAINYNGSNAIEMHGFQAHVGSMRSPSRGRVKLRSRDPNDHPSILFNYMAEALDWREFRDAIRATREIMRQPALDRYRGRELNPGADCKSDKELDAFVRARAETAFHPSCSCKMGYDDMA 487
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA_STRMK (Choline dehydrogenase OS=Stenotrophomonas maltophilia (strain K279a) GN=betA PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 4.820e-37 Identity = 80/219 (36.53%), Postives = 124/219 (56.62%), Query Frame = -1 Query: 18 PAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARITPGFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMG 674 P ++ +G+G D L+ L +L HH PGVG LQDH+ + +QY K+ VS AL + +GA W+ +G+GASN FE G F R + + ++ NL++ FLP+ + FQ MR SRG + SKDP+ P I N+++ D + R +R TRE+ AQ + G E+SPG LQ+DA+++A++R++A T +H + +MG Sbjct: 266 PQILQRSGVGPADLLRSLDIDLVHHLPGVGANLQDHLEMYLQYEC-KKPVSLAPALKLYNQPAIGAEWLFLGTGIGASNQFEAGGFIRSDAEFDWPNLQYHFLPVAINYNGSNPIKAHSFQMHVGSMRSPSRGRIHVRSKDPREHPSILFNYMSHEQDWREFRAAIRITREIFAQPALAPYSGREISPGSALQTDAQIDAFVREHAETAYHPSCSNKMG 483
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA_BURVG (Choline dehydrogenase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=betA PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 4.820e-37 Identity = 86/224 (38.39%), Postives = 122/224 (54.46%), Query Frame = -1 Query: 3 PAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARITPGFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMGVDEMA 674 P ++ +G+G LK L + PGVG+ LQDH+ + IQY K+ VS AL + +G WM +GLGASN+FE G F R D + N+++ FLP+ + A GFQ MR SRG V S+DP P I N++ D + R+ +R TRE++ Q + D RG EL+PG +SD EL+ ++R A T FH +C+MG D+MA Sbjct: 265 PQLLQRSGVGPGAWLKELDIPIVLDLPGVGQNLQDHLEMYIQYEC-KEPVSLYPALKWWNQPKIGLEWMLNGTGLGASNHFEAGGFIRTRDDDPWPNIQYHFLPVAINYNGSNAIEMHGFQAHVGSMRSPSRGRVKLRSRDPNDHPSILFNYMAEALDWREFRDAIRATREIMRQPALDRYRGRELNPGADCRSDKELDTFVRARAETAFHPSCSCKMGYDDMA 487
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA_BURCJ (Choline dehydrogenase OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=betA PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 4.820e-37 Identity = 86/224 (38.39%), Postives = 123/224 (54.91%), Query Frame = -1 Query: 3 PAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARITPGFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMGVDEMA 674 P ++ +G+G LK L + PGVG+ LQDH+ + IQY K+ VS AL + +G WM +GLGASN+FE G F R D + N+++ FLP+ + A GFQ MR SRG V S+DP P I N++ D + R+ +R TRE++ Q + D RG EL+PG ++D EL+A++R A T FH +C+MG D+MA Sbjct: 265 PQLLQRSGVGPGAWLKALDIPVVLDLPGVGQNLQDHLEMYIQYEC-KEPVSLYPALKWWNQPKIGLEWMLNGTGLGASNHFEAGGFIRTRDDDPWPNIQYHFLPVAINYNGSNAIEMHGFQAHVGSMRSPSRGRVKLRSRDPNDHPSILFNYMAEALDWREFRDAIRATREIMRQPALDRYRGRELNPGADCKTDKELDAFVRARAETAFHPSCSCKMGYDDMA 487
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA_BURMA (Choline dehydrogenase OS=Burkholderia mallei GN=betA PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 6.295e-37 Identity = 85/224 (37.95%), Postives = 124/224 (55.36%), Query Frame = -1 Query: 3 PAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARITPGFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMGVDEMA 674 P ++ +G+G + L+ L + PGVG+ LQDH+ + IQ+ K+ VS AL + +G WM +GLGASN+FE G F R D + N+++ FLP+ + A GFQ MR S G V S+DP A P I N++ D + R+ +R TRE++ Q + D RG EL+PG L+SD EL+ ++R A T FH +C+MG D+MA Sbjct: 265 PQLLQRSGVGPGEWLRELDIPVVLDLPGVGRNLQDHLEMYIQFEC-KEPVSLYPALKWWNQPKIGLEWMLNGTGLGASNHFEAGGFIRTRDDDPWPNIQYHFLPVAINYNGSNAIEMHGFQAHVGSMRSPSCGRVKLKSRDPHAHPSILFNYMAEALDWREFRDAIRATREIMRQPALDRFRGRELNPGADLKSDNELDTFVRARAETAFHPSCSCKMGYDDMA 487
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA_VIBHB (Choline dehydrogenase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=betA PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 2.025e-35 Identity = 79/230 (34.35%), Postives = 123/230 (53.48%), Query Frame = -1 Query: 9 SSVRSLRFPAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARITPGFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMGVDE 698 SS S+ ++ L+GIG L G E++H GVGK LQDH+ V QY KQ ++ L + + +G W+ R GLGA+N+FE AF R + ++ N++ FLP + A GFQ +P SRGSV S +P P I N+++ D + R+ +R TRE++ Q + D RGEE+ PG ++ SD + W++ N + +H +C+MG ++ Sbjct: 253 SSAGSIGSVQLLQLSGIGPKTVLDKAGIEVKHTLEGVGKNLQDHLEVYFQYHC-KQPITLNSKLGLISKGLIGTEWILTRKGLGATNHFESCAFIRSREGLKSPNIQFHFLPAAMRYDGRAAFDGHGFQVHVGPNKPESRGSVEVVSANPNDKPKIEFNYISTEQDKQDWRDCIRLTREILNQPAMDAFRGEEIQPGLNITSDEAIGEWVKQNVESAYHPSCSCKMGSND 481
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: CHDH_MOUSE (Choline dehydrogenase, mitochondrial OS=Mus musculus GN=Chdh PE=1 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.988e-34 Identity = 75/223 (33.63%), Postives = 126/223 (56.50%), Query Frame = -1 Query: 18 SLRFPAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARITPGFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMG 686 ++ P ++ML+G+G+ D+L+ L + H PGVG+ LQDH+ V +Q + Q ++ A PL ++ +G W+ + +G GA+ + E G F R V + +++ FLP + K +Q MR S G + S +P+ P+I N+L+ D+E R+ +R +RE+ AQ + RG+EL PG H+QSD E++A++R A + +H TC+MG Sbjct: 300 AINSPQLLMLSGVGNADDLRKLDIPVVCHLPGVGQNLQDHLEVYVQQACT-QPITLHSAQKPLRKVCIGLEWLWSYTGDGATAHLETGGFIRSRPGVPHPDIQFHFLPSQVIDHGRKPTQQEAYQVHVGTMRATSVGWLKLRSANPRDHPVIHPNYLSTETDVEDFRQCVRLSREIFAQEALAPFRGKELQPGSHVQSDKEIDAFVRAKADSAYHPSCTCKMG 521 The following BLAST results are available for this feature:
BLAST of EY728614 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 128
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY728614 ID=EY728614; Name=EY728614; organism=Citrus sinensis; type=EST; length=782bpback to top |