EY728614
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA_ECO45 (Choline dehydrogenase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=betA PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.470e-41 Identity = 85/224 (37.95%), Postives = 131/224 (58.48%), Query Frame = -1 Query: 3 PAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARITPGFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMGVDEMA 674 P ++ +G+G+ + L L H PGVG+ LQDH+ + +QY K+ VS AL + +GA W+ +G+GASN+FE G F R ++ + N+++ FLP+ + A GFQ MR SRG V S+DP P I N+++ D ++ R+ +R TRE++ Q + D+ RG E+SPG Q+D +L+ ++R++A T FH C TC+MG DEMA Sbjct: 264 PQILQRSGVGNAELLAEFDIPLVHELPGVGENLQDHLEMYLQYEC-KEPVSLYPALQWWNQPKIGAEWLFGGTGVGASNHFEAGGFIRSREEFAWPNIQYHFLPVAINYNGSNAVKEHGFQCHVGSMRSPSRGHVRIKSRDPHQHPAILFNYMSHEQDWQEFRDAIRITREIMHQPALDQYRGREISPGVECQTDEQLDEFVRNHAETAFHPCGTCKMGYDEMA 486
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA_XANCP (Choline dehydrogenase OS=Xanthomonas campestris pv. campestris GN=betA PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 3.226e-41 Identity = 89/224 (39.73%), Postives = 131/224 (58.48%), Query Frame = -1 Query: 3 PAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARITPGFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMGVDEMA 674 P ++ +G+G PD L+ L +L H PGVG+ LQDH+ V +QY+ K VS AL + +GA W+ A +G GASN FE G F R ++ ++ N+++ FLP+ + A GFQ MR SRG V S+DP+ P I N+ + D ++ R+ +R TRE+IAQ + D RG E+SP ++DAEL+A++R A T +H +C MG D+MA Sbjct: 266 PQLLQRSGVGAPDLLRALDVQLVHDLPGVGQNLQDHLEVYMQYACTKP-VSLYPALQWWNQPAIGAEWLFAGTGTGASNQFEAGGFIRTREEFDWPNIQYHFLPVAINYNGSNAVKEHGFQAHVGSMRTPSRGRVHARSRDPRQHPSILFNYQSTDQDWQEFRDAIRITREIIAQPALDPYRGREISPSADCKTDAELDAFVRARAETAYHPSCSCAMGTDDMA 488
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA_XANCB (Choline dehydrogenase OS=Xanthomonas campestris pv. campestris (strain B100) GN=betA PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 3.226e-41 Identity = 89/224 (39.73%), Postives = 131/224 (58.48%), Query Frame = -1 Query: 3 PAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARITPGFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMGVDEMA 674 P ++ +G+G PD L+ L +L H PGVG+ LQDH+ V +QY+ K VS AL + +GA W+ A +G GASN FE G F R ++ ++ N+++ FLP+ + A GFQ MR SRG V S+DP+ P I N+ + D ++ R+ +R TRE+IAQ + D RG E+SP ++DAEL+A++R A T +H +C MG D+MA Sbjct: 266 PQLLQRSGVGAPDLLRALDVQLVHDLPGVGQNLQDHLEVYMQYACTKP-VSLYPALQWWNQPAIGAEWLFAGTGTGASNQFEAGGFIRTREEFDWPNIQYHFLPVAINYNGSNAVKEHGFQAHVGSMRTPSRGRVHARSRDPRQHPSILFNYQSTDQDWQEFRDAIRITREIIAQPALDPYRGREISPSADCKTDAELDAFVRARAETAYHPSCSCAMGTDDMA 488
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA_XANC8 (Choline dehydrogenase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=betA PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 3.226e-41 Identity = 89/224 (39.73%), Postives = 131/224 (58.48%), Query Frame = -1 Query: 3 PAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARITPGFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMGVDEMA 674 P ++ +G+G PD L+ L +L H PGVG+ LQDH+ V +QY+ K VS AL + +GA W+ A +G GASN FE G F R ++ ++ N+++ FLP+ + A GFQ MR SRG V S+DP+ P I N+ + D ++ R+ +R TRE+IAQ + D RG E+SP ++DAEL+A++R A T +H +C MG D+MA Sbjct: 266 PQLLQRSGVGAPDLLRALDVQLVHDLPGVGQNLQDHLEVYMQYACTKP-VSLYPALQWWNQPAIGAEWLFAGTGTGASNQFEAGGFIRTREEFDWPNIQYHFLPVAINYNGSNAVKEHGFQAHVGSMRTPSRGRVHARSRDPRQHPSILFNYQSTDQDWQEFRDAIRITREIIAQPALDPYRGREISPSADCKTDAELDAFVRARAETAYHPSCSCAMGTDDMA 488
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA_ECOSE (Choline dehydrogenase OS=Escherichia coli (strain SE11) GN=betA PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 4.213e-41 Identity = 84/224 (37.50%), Postives = 131/224 (58.48%), Query Frame = -1 Query: 3 PAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARITPGFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMGVDEMA 674 P ++ +G+G+ + L L H PGVG+ LQDH+ + +QY K+ VS AL + +GA W+ +G+GASN+FE G F R ++ + N+++ FLP+ + A GFQ MR SRG V S+DP P I N+++ D ++ R+ +R TRE++ Q + D+ RG E+SPG Q+D +L+ ++R++A T FH C TC+MG DEM+ Sbjct: 264 PQILQRSGVGNAELLAEFDIPLVHELPGVGENLQDHLEMYLQYEC-KEPVSLYPALQWWNQPKIGAEWLFGGTGVGASNHFEAGGFIRSREEFAWPNIQYHFLPVAINYNGSNAVKEHGFQCHVGSMRSPSRGHVRIKSRDPHQHPAILFNYMSHEQDWQEFRDAIRITREIMHQPALDQYRGREISPGTECQTDEQLDEFVRNHAETAFHPCGTCKMGYDEMS 486
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA_ECOLU (Choline dehydrogenase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=betA PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 4.213e-41 Identity = 85/224 (37.95%), Postives = 130/224 (58.04%), Query Frame = -1 Query: 3 PAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARITPGFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMGVDEMA 674 P ++ +G+G + L L H PGVG+ LQDH+ + +QY K+ VS AL + +GA W+ +G+GASN+FE G F R ++ + N+++ FLP+ + A GFQ MR SRG V S+DP P I N+++ D ++ R+ +R TRE++ Q + D+ RG E+SPG Q+D +L+ ++R++A T FH C TC+MG DEMA Sbjct: 264 PQILQRSGVGSAELLAEFDIPLVHDLPGVGENLQDHLEMYLQYEC-KEPVSLYPALQWWNQPKIGAEWLFGGTGVGASNHFEAGGFIRSREEFAWPNIQYHFLPVAINYNGSNAVKEHGFQCHVGSMRSPSRGHVRIKSRDPHQHPAILFNYMSHEQDWQEFRDAIRITREIMHQPALDQYRGREISPGVECQTDEQLDEFVRNHAETAFHPCGTCKMGYDEMA 486
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA_ECOHS (Choline dehydrogenase OS=Escherichia coli O9:H4 (strain HS) GN=betA PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 4.213e-41 Identity = 84/224 (37.50%), Postives = 131/224 (58.48%), Query Frame = -1 Query: 3 PAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARITPGFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMGVDEMA 674 P ++ +G+G+ + L L H PGVG+ LQDH+ + +QY K+ VS AL + +GA W+ +G+GASN+FE G F R ++ + N+++ FLP+ + A GFQ MR SRG V S+DP P I N+++ D ++ R+ +R TRE++ Q + D+ RG E+SPG Q+D +L+ ++R++A T FH C TC+MG DEM+ Sbjct: 264 PQILQRSGVGNAELLAEFDIPLVHELPGVGENLQDHLEMYLQYEC-KEPVSLYPALQWWNQPKIGAEWLFGGTGVGASNHFEAGGFIRSREEFAWPNIQYHFLPVAINYNGSNAVKEHGFQCHVGSMRSPSRGHVRIKSRDPHQHPAILFNYMSHEQDWQEFRDAIRITREIMHQPALDQYRGREISPGTECQTDEQLDEFVRNHAETAFHPCGTCKMGYDEMS 486
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA_ECO8A (Choline dehydrogenase OS=Escherichia coli O8 (strain IAI1) GN=betA PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 4.213e-41 Identity = 84/224 (37.50%), Postives = 131/224 (58.48%), Query Frame = -1 Query: 3 PAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARITPGFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMGVDEMA 674 P ++ +G+G+ + L L H PGVG+ LQDH+ + +QY K+ VS AL + +GA W+ +G+GASN+FE G F R ++ + N+++ FLP+ + A GFQ MR SRG V S+DP P I N+++ D ++ R+ +R TRE++ Q + D+ RG E+SPG Q+D +L+ ++R++A T FH C TC+MG DEM+ Sbjct: 264 PQILQRSGVGNAELLAEFDIPLVHELPGVGENLQDHLEMYLQYEC-KEPVSLYPALQWWNQPKIGAEWLFGGTGVGASNHFEAGGFIRSREEFAWPNIQYHFLPVAINYNGSNAVKEHGFQCHVGSMRSPSRGHVRIKSRDPHQHPAILFNYMSHEQDWQEFRDAIRITREIMHQPALDQYRGREISPGTECQTDEQLDEFVRNHAETAFHPCGTCKMGYDEMS 486
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA_ECO55 (Choline dehydrogenase OS=Escherichia coli (strain 55989 / EAEC) GN=betA PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 4.213e-41 Identity = 84/224 (37.50%), Postives = 131/224 (58.48%), Query Frame = -1 Query: 3 PAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARITPGFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMGVDEMA 674 P ++ +G+G+ + L L H PGVG+ LQDH+ + +QY K+ VS AL + +GA W+ +G+GASN+FE G F R ++ + N+++ FLP+ + A GFQ MR SRG V S+DP P I N+++ D ++ R+ +R TRE++ Q + D+ RG E+SPG Q+D +L+ ++R++A T FH C TC+MG DEM+ Sbjct: 264 PQILQRSGVGNAELLAEFDIPLVHELPGVGENLQDHLEMYLQYEC-KEPVSLYPALQWWNQPKIGAEWLFGGTGVGASNHFEAGGFIRSREEFAWPNIQYHFLPVAINYNGSNAVKEHGFQCHVGSMRSPSRGHVRIKSRDPHQHPAILFNYMSHEQDWQEFRDAIRITREIMHQPALDQYRGREISPGTECQTDEQLDEFVRNHAETAFHPCGTCKMGYDEMS 486
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA_ECO24 (Choline dehydrogenase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=betA PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 4.213e-41 Identity = 84/224 (37.50%), Postives = 131/224 (58.48%), Query Frame = -1 Query: 3 PAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARITPGFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMGVDEMA 674 P ++ +G+G+ + L L H PGVG+ LQDH+ + +QY K+ VS AL + +GA W+ +G+GASN+FE G F R ++ + N+++ FLP+ + A GFQ MR SRG V S+DP P I N+++ D ++ R+ +R TRE++ Q + D+ RG E+SPG Q+D +L+ ++R++A T FH C TC+MG DEM+ Sbjct: 264 PQILQRSGVGNAELLAEFDIPLVHELPGVGENLQDHLEMYLQYEC-KEPVSLYPALQWWNQPKIGAEWLFGGTGVGASNHFEAGGFIRSREEFAWPNIQYHFLPVAINYNGSNAVKEHGFQCHVGSMRSPSRGHVRIKSRDPHQHPAILFNYMSHEQDWQEFRDAIRITREIMHQPALDQYRGREISPGTECQTDEQLDEFVRNHAETAFHPCGTCKMGYDEMS 486 The following BLAST results are available for this feature:
BLAST of EY728614 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 128
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY728614 ID=EY728614; Name=EY728614; organism=Citrus sinensis; type=EST; length=782bpback to top |