EY728614
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA_STAAB (Choline dehydrogenase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=betA PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.957e-38 Identity = 84/219 (38.36%), Postives = 125/219 (57.08%), Query Frame = -1 Query: 18 PAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARITPGFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMG 674 P ++ L+GIGD + LK G E R H PGVG+ +DH+ V IQ+ K+ VS +L F+G +W+ R+G ASN+FE G F R N++V+Y NL FLP+ + KA + G+Q M SRGS+ SKDP P IR N+L+ D ++ E +R R +++Q++ D G E+SPG +Q+D E+ W+R + T H + +MG Sbjct: 266 PQLLQLSGIGDSEFLKSKGIEPRVHLPGVGENFEDHLEVYIQHKC-KEPVSLQPSLDIKRMPFIGLQWIFTRTGAAASNHFEGGGFVRSNNEVDYPNLMFHFLPIAVRYDGQKAAVAHGYQVHVGPMYSNSRGSLKIKSKDPFEKPSIRFNYLSTEEDKKEWVEAIRVARNILSQKAMDPFNGGEISPGPEVQTDEEILDWVRRDGETALHPSCSAKMG 483
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA_STAA9 (Choline dehydrogenase OS=Staphylococcus aureus (strain JH9) GN=betA PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.957e-38 Identity = 84/219 (38.36%), Postives = 125/219 (57.08%), Query Frame = -1 Query: 18 PAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARITPGFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMG 674 P ++ L+GIGD + LK G E R H PGVG+ +DH+ V IQ+ K+ VS +L F+G +W+ R+G ASN+FE G F R N++V+Y NL FLP+ + KA + G+Q M SRGS+ SKDP P IR N+L+ D ++ E +R R +++Q++ D G E+SPG +Q+D E+ W+R + T H + +MG Sbjct: 266 PQLLQLSGIGDSEFLKSKGIEPRVHLPGVGENFEDHLEVYIQHKC-KEPVSLQPSLDIKRMPFIGLQWIFTRTGAAASNHFEGGGFVRSNNEVDYPNLMFHFLPIAVRYDGQKAAVAHGYQVHVGPMYSNSRGSLKIKSKDPFEKPSIRFNYLSTEEDKKEWVEAIRVARNILSQKAMDPFNGGEISPGPEVQTDEEILDWVRRDGETALHPSCSAKMG 483
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA_STAA8 (Choline dehydrogenase OS=Staphylococcus aureus (strain NCTC 8325) GN=betA PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.957e-38 Identity = 84/219 (38.36%), Postives = 125/219 (57.08%), Query Frame = -1 Query: 18 PAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARITPGFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMG 674 P ++ L+GIGD + LK G E R H PGVG+ +DH+ V IQ+ K+ VS +L F+G +W+ R+G ASN+FE G F R N++V+Y NL FLP+ + KA + G+Q M SRGS+ SKDP P IR N+L+ D ++ E +R R +++Q++ D G E+SPG +Q+D E+ W+R + T H + +MG Sbjct: 266 PQLLQLSGIGDSEFLKSKGIEPRVHLPGVGENFEDHLEVYIQHKC-KEPVSLQPSLDIKRMPFIGLQWIFTRTGAAASNHFEGGGFVRSNNEVDYPNLMFHFLPIAVRYDGQKAAVAHGYQVHVGPMYSNSRGSLKIKSKDPFEKPSIRFNYLSTEEDKKEWVEAIRVARNILSQKAMDPFNGGEISPGPEVQTDEEILDWVRRDGETALHPSCSAKMG 483
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA_STAA3 (Choline dehydrogenase OS=Staphylococcus aureus (strain USA300) GN=betA PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.957e-38 Identity = 84/219 (38.36%), Postives = 125/219 (57.08%), Query Frame = -1 Query: 18 PAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARITPGFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMG 674 P ++ L+GIGD + LK G E R H PGVG+ +DH+ V IQ+ K+ VS +L F+G +W+ R+G ASN+FE G F R N++V+Y NL FLP+ + KA + G+Q M SRGS+ SKDP P IR N+L+ D ++ E +R R +++Q++ D G E+SPG +Q+D E+ W+R + T H + +MG Sbjct: 266 PQLLQLSGIGDSEFLKSKGIEPRVHLPGVGENFEDHLEVYIQHKC-KEPVSLQPSLDIKRMPFIGLQWIFTRTGAAASNHFEGGGFVRSNNEVDYPNLMFHFLPIAVRYDGQKAAVAHGYQVHVGPMYSNSRGSLKIKSKDPFEKPSIRFNYLSTEEDKKEWVEAIRVARNILSQKAMDPFNGGEISPGPEVQTDEEILDWVRRDGETALHPSCSAKMG 483
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA_STAA2 (Choline dehydrogenase OS=Staphylococcus aureus (strain JH1) GN=betA PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.957e-38 Identity = 84/219 (38.36%), Postives = 125/219 (57.08%), Query Frame = -1 Query: 18 PAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARITPGFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMG 674 P ++ L+GIGD + LK G E R H PGVG+ +DH+ V IQ+ K+ VS +L F+G +W+ R+G ASN+FE G F R N++V+Y NL FLP+ + KA + G+Q M SRGS+ SKDP P IR N+L+ D ++ E +R R +++Q++ D G E+SPG +Q+D E+ W+R + T H + +MG Sbjct: 266 PQLLQLSGIGDSEFLKSKGIEPRVHLPGVGENFEDHLEVYIQHKC-KEPVSLQPSLDIKRMPFIGLQWIFTRTGAAASNHFEGGGFVRSNNEVDYPNLMFHFLPIAVRYDGQKAAVAHGYQVHVGPMYSNSRGSLKIKSKDPFEKPSIRFNYLSTEEDKKEWVEAIRVARNILSQKAMDPFNGGEISPGPEVQTDEEILDWVRRDGETALHPSCSAKMG 483
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA_STAA1 (Choline dehydrogenase OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=betA PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.957e-38 Identity = 84/219 (38.36%), Postives = 125/219 (57.08%), Query Frame = -1 Query: 18 PAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARITPGFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMG 674 P ++ L+GIGD + LK G E R H PGVG+ +DH+ V IQ+ K+ VS +L F+G +W+ R+G ASN+FE G F R N++V+Y NL FLP+ + KA + G+Q M SRGS+ SKDP P IR N+L+ D ++ E +R R +++Q++ D G E+SPG +Q+D E+ W+R + T H + +MG Sbjct: 266 PQLLQLSGIGDSEFLKSKGIEPRVHLPGVGENFEDHLEVYIQHKC-KEPVSLQPSLDIKRMPFIGLQWIFTRTGAAASNHFEGGGFVRSNNEVDYPNLMFHFLPIAVRYDGQKAAVAHGYQVHVGPMYSNSRGSLKIKSKDPFEKPSIRFNYLSTEEDKKEWVEAIRVARNILSQKAMDPFNGGEISPGPEVQTDEEILDWVRRDGETALHPSCSAKMG 483
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA_RHIE6 (Choline dehydrogenase OS=Rhizobium etli (strain CIAT 652) GN=betA PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.556e-38 Identity = 88/230 (38.26%), Postives = 133/230 (57.83%), Query Frame = -1 Query: 9 SVRSLRFPAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARI-TPGFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMGVDE 695 S S P ++ML+GIG L +G ++ PGVG LQDH+ Q + K VS L + GA+W+ ++ GLGASN FE AF R ++ ++++ FLP V Y GKA + GFQ SRGSVT S DPKA+P++R N+++ P D E+ R +R TRE+ Q ++D RG E+ PG+ +QSD +++A++R++ + +H C TC+MG + Sbjct: 249 SASSFNSPKLLMLSGIGPGQHLNDMGIAVKADRPGVGANLQDHMEFYFQQVSTKP-VSLYSWLPWFWQGVAGAQWLLSKGGLGASNQFEACAFLRSAPGLKQPDIQYHFLP-VAISYDGKAAAKSHGFQVHVGYNLSKSRGSVTLRSPDPKAEPVLRFNYMSHPEDWEKFRHCVRLTREIFGQTAFDAYRGPEIQPGEGVQSDEQIDAFLREHLESAYHPCGTCKMGAKD 476
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA_STAS1 (Choline dehydrogenase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=betA PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 4.360e-38 Identity = 84/230 (36.52%), Postives = 128/230 (55.65%), Query Frame = -1 Query: 3 SLRFPAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARITPGFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMG--VDEMA 686 ++ P ++ L+GIGD + L+ LG E R H PGVG+ +DH+ V +Q++ K+ VS +L+ L F+G +W+ R G ASN+FE G F R N+ V+Y NL FLP+ + KA G+Q M SRG + SKDP P N+L+ D + E ++ R ++ Q++ D G E+SPG +Q+D E+ W++ + T H +CRMG DEM+ Sbjct: 259 AINSPQLLQLSGIGDSEHLRSLGIEPRIHLPGVGENFEDHLEVYVQHAC-KEPVSMQPSLNKLKMPFIGLQWIFGRKGAAASNHFEGGGFVRSNEDVDYPNLMFHFLPIAVRYDGTKAPAAHGYQVHVGPMYSNSRGHLKIKSKDPFVKPDFVFNYLSTEEDKREWVEAIKVARNILGQKALDPYNGGEISPGPEVQTDEEIIEWVKRDGETALHPSCSCRMGPASDEMS 487
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA_RHIL3 (Choline dehydrogenase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=betA PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 4.360e-38 Identity = 89/230 (38.70%), Postives = 133/230 (57.83%), Query Frame = -1 Query: 9 SVRSLRFPAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARI-TPGFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMGVDE 695 S S P ++ML+GIG L+ +G ++ PGVG LQDH+ Q + K VS L + GA+W+ +R GLGASN FE AF R ++ ++++ FLP V Y GKA + GFQ SRGSV+ S DPKADP++R N+++ D E+ R +R TRE+ Q ++ + RG E+ PG+ +QSD E++A++R++ + +H C TCRMG + Sbjct: 249 SASSFNSPKLLMLSGIGPGQHLQDMGIAVKADRPGVGANLQDHMEFYFQQVSTKP-VSLYSWLPWFWQGVAGAQWLLSRGGLGASNQFEACAFLRSAPGLKQPDIQYHFLP-VAISYDGKAAAKSHGFQVHVGYNLSKSRGSVSLRSADPKADPVLRFNYMSHAEDWEKFRHCVRLTREIFGQSAFHDYRGPEIQPGEGVQSDEEIDAFLREHLESAYHPCGTCRMGAKD 476
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA_PSEFS (Choline dehydrogenase OS=Pseudomonas fluorescens (strain SBW25) GN=betA PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 4.360e-38 Identity = 83/224 (37.05%), Postives = 129/224 (57.59%), Query Frame = -1 Query: 3 PAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARITPGFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMGVDEMA 674 P ++ +G+G L+ L + H PGVG+ LQDH+ + +QY+ Q VS +L + +GA W+ +G+GASN FE G F R + ++ N+++ FLP+ + GFQ MR SRG V SK+P+ P I N++ D ++ R+G+R TRE++ Q + D RG E+SPG +Q+D +L+ +IR++A T FH +C+MG DEMA Sbjct: 266 PQLLQRSGVGPAKLLESLDIPVVHDLPGVGENLQDHLELYLQYACT-QPVSLYPSLLWYNQPAIGAEWLFNGTGIGASNQFEAGGFIRSRPEFDWPNIQYHFLPVAINYNGSNGVKEHGFQAHMGSMRSPSRGRVQLKSKNPRDYPSILFNYMATEQDWQEFRDGIRLTREIMQQPALDPYRGREISPGIDVQTDEQLDKFIREHAETAFHPSCSCKMGTDEMA 488 The following BLAST results are available for this feature:
BLAST of EY728614 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 128
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY728614 ID=EY728614; Name=EY728614; organism=Citrus sinensis; type=EST; length=782bpback to top |