EY728614

Overview
NameEY728614
Unique NameEY728614
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length782
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA_STAAB (Choline dehydrogenase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=betA PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.957e-38
Identity = 84/219 (38.36%), Postives = 125/219 (57.08%), Query Frame = -1
Query:   18 PAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARITPGFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMG 674
            P ++ L+GIGD + LK  G E R H PGVG+  +DH+ V IQ+   K+ VS   +L      F+G +W+  R+G  ASN+FE G F R N++V+Y NL   FLP+   +   KA +  G+Q     M   SRGS+   SKDP   P IR N+L+   D ++  E +R  R +++Q++ D   G E+SPG  +Q+D E+  W+R +  T  H   + +MG
Sbjct:  266 PQLLQLSGIGDSEFLKSKGIEPRVHLPGVGENFEDHLEVYIQHKC-KEPVSLQPSLDIKRMPFIGLQWIFTRTGAAASNHFEGGGFVRSNNEVDYPNLMFHFLPIAVRYDGQKAAVAHGYQVHVGPMYSNSRGSLKIKSKDPFEKPSIRFNYLSTEEDKKEWVEAIRVARNILSQKAMDPFNGGEISPGPEVQTDEEILDWVRRDGETALHPSCSAKMG 483          
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA_STAA9 (Choline dehydrogenase OS=Staphylococcus aureus (strain JH9) GN=betA PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.957e-38
Identity = 84/219 (38.36%), Postives = 125/219 (57.08%), Query Frame = -1
Query:   18 PAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARITPGFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMG 674
            P ++ L+GIGD + LK  G E R H PGVG+  +DH+ V IQ+   K+ VS   +L      F+G +W+  R+G  ASN+FE G F R N++V+Y NL   FLP+   +   KA +  G+Q     M   SRGS+   SKDP   P IR N+L+   D ++  E +R  R +++Q++ D   G E+SPG  +Q+D E+  W+R +  T  H   + +MG
Sbjct:  266 PQLLQLSGIGDSEFLKSKGIEPRVHLPGVGENFEDHLEVYIQHKC-KEPVSLQPSLDIKRMPFIGLQWIFTRTGAAASNHFEGGGFVRSNNEVDYPNLMFHFLPIAVRYDGQKAAVAHGYQVHVGPMYSNSRGSLKIKSKDPFEKPSIRFNYLSTEEDKKEWVEAIRVARNILSQKAMDPFNGGEISPGPEVQTDEEILDWVRRDGETALHPSCSAKMG 483          
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA_STAA8 (Choline dehydrogenase OS=Staphylococcus aureus (strain NCTC 8325) GN=betA PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.957e-38
Identity = 84/219 (38.36%), Postives = 125/219 (57.08%), Query Frame = -1
Query:   18 PAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARITPGFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMG 674
            P ++ L+GIGD + LK  G E R H PGVG+  +DH+ V IQ+   K+ VS   +L      F+G +W+  R+G  ASN+FE G F R N++V+Y NL   FLP+   +   KA +  G+Q     M   SRGS+   SKDP   P IR N+L+   D ++  E +R  R +++Q++ D   G E+SPG  +Q+D E+  W+R +  T  H   + +MG
Sbjct:  266 PQLLQLSGIGDSEFLKSKGIEPRVHLPGVGENFEDHLEVYIQHKC-KEPVSLQPSLDIKRMPFIGLQWIFTRTGAAASNHFEGGGFVRSNNEVDYPNLMFHFLPIAVRYDGQKAAVAHGYQVHVGPMYSNSRGSLKIKSKDPFEKPSIRFNYLSTEEDKKEWVEAIRVARNILSQKAMDPFNGGEISPGPEVQTDEEILDWVRRDGETALHPSCSAKMG 483          
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA_STAA3 (Choline dehydrogenase OS=Staphylococcus aureus (strain USA300) GN=betA PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.957e-38
Identity = 84/219 (38.36%), Postives = 125/219 (57.08%), Query Frame = -1
Query:   18 PAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARITPGFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMG 674
            P ++ L+GIGD + LK  G E R H PGVG+  +DH+ V IQ+   K+ VS   +L      F+G +W+  R+G  ASN+FE G F R N++V+Y NL   FLP+   +   KA +  G+Q     M   SRGS+   SKDP   P IR N+L+   D ++  E +R  R +++Q++ D   G E+SPG  +Q+D E+  W+R +  T  H   + +MG
Sbjct:  266 PQLLQLSGIGDSEFLKSKGIEPRVHLPGVGENFEDHLEVYIQHKC-KEPVSLQPSLDIKRMPFIGLQWIFTRTGAAASNHFEGGGFVRSNNEVDYPNLMFHFLPIAVRYDGQKAAVAHGYQVHVGPMYSNSRGSLKIKSKDPFEKPSIRFNYLSTEEDKKEWVEAIRVARNILSQKAMDPFNGGEISPGPEVQTDEEILDWVRRDGETALHPSCSAKMG 483          
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA_STAA2 (Choline dehydrogenase OS=Staphylococcus aureus (strain JH1) GN=betA PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.957e-38
Identity = 84/219 (38.36%), Postives = 125/219 (57.08%), Query Frame = -1
Query:   18 PAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARITPGFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMG 674
            P ++ L+GIGD + LK  G E R H PGVG+  +DH+ V IQ+   K+ VS   +L      F+G +W+  R+G  ASN+FE G F R N++V+Y NL   FLP+   +   KA +  G+Q     M   SRGS+   SKDP   P IR N+L+   D ++  E +R  R +++Q++ D   G E+SPG  +Q+D E+  W+R +  T  H   + +MG
Sbjct:  266 PQLLQLSGIGDSEFLKSKGIEPRVHLPGVGENFEDHLEVYIQHKC-KEPVSLQPSLDIKRMPFIGLQWIFTRTGAAASNHFEGGGFVRSNNEVDYPNLMFHFLPIAVRYDGQKAAVAHGYQVHVGPMYSNSRGSLKIKSKDPFEKPSIRFNYLSTEEDKKEWVEAIRVARNILSQKAMDPFNGGEISPGPEVQTDEEILDWVRRDGETALHPSCSAKMG 483          
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA_STAA1 (Choline dehydrogenase OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=betA PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.957e-38
Identity = 84/219 (38.36%), Postives = 125/219 (57.08%), Query Frame = -1
Query:   18 PAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARITPGFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMG 674
            P ++ L+GIGD + LK  G E R H PGVG+  +DH+ V IQ+   K+ VS   +L      F+G +W+  R+G  ASN+FE G F R N++V+Y NL   FLP+   +   KA +  G+Q     M   SRGS+   SKDP   P IR N+L+   D ++  E +R  R +++Q++ D   G E+SPG  +Q+D E+  W+R +  T  H   + +MG
Sbjct:  266 PQLLQLSGIGDSEFLKSKGIEPRVHLPGVGENFEDHLEVYIQHKC-KEPVSLQPSLDIKRMPFIGLQWIFTRTGAAASNHFEGGGFVRSNNEVDYPNLMFHFLPIAVRYDGQKAAVAHGYQVHVGPMYSNSRGSLKIKSKDPFEKPSIRFNYLSTEEDKKEWVEAIRVARNILSQKAMDPFNGGEISPGPEVQTDEEILDWVRRDGETALHPSCSAKMG 483          
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA_RHIE6 (Choline dehydrogenase OS=Rhizobium etli (strain CIAT 652) GN=betA PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.556e-38
Identity = 88/230 (38.26%), Postives = 133/230 (57.83%), Query Frame = -1
Query:    9 SVRSLRFPAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARI-TPGFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMGVDE 695
            S  S   P ++ML+GIG    L  +G  ++   PGVG  LQDH+    Q  + K  VS    L    +   GA+W+ ++ GLGASN FE  AF R    ++  ++++ FLP V   Y GKA   + GFQ         SRGSVT  S DPKA+P++R N+++ P D E+ R  +R TRE+  Q ++D  RG E+ PG+ +QSD +++A++R++  + +H C TC+MG  +
Sbjct:  249 SASSFNSPKLLMLSGIGPGQHLNDMGIAVKADRPGVGANLQDHMEFYFQQVSTKP-VSLYSWLPWFWQGVAGAQWLLSKGGLGASNQFEACAFLRSAPGLKQPDIQYHFLP-VAISYDGKAAAKSHGFQVHVGYNLSKSRGSVTLRSPDPKAEPVLRFNYMSHPEDWEKFRHCVRLTREIFGQTAFDAYRGPEIQPGEGVQSDEQIDAFLREHLESAYHPCGTCKMGAKD 476          
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA_STAS1 (Choline dehydrogenase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=betA PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 4.360e-38
Identity = 84/230 (36.52%), Postives = 128/230 (55.65%), Query Frame = -1
Query:    3 SLRFPAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARITPGFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMG--VDEMA 686
            ++  P ++ L+GIGD + L+ LG E R H PGVG+  +DH+ V +Q++  K+ VS   +L+ L   F+G +W+  R G  ASN+FE G F R N+ V+Y NL   FLP+   +   KA    G+Q     M   SRG +   SKDP   P    N+L+   D  +  E ++  R ++ Q++ D   G E+SPG  +Q+D E+  W++ +  T  H   +CRMG   DEM+
Sbjct:  259 AINSPQLLQLSGIGDSEHLRSLGIEPRIHLPGVGENFEDHLEVYVQHAC-KEPVSMQPSLNKLKMPFIGLQWIFGRKGAAASNHFEGGGFVRSNEDVDYPNLMFHFLPIAVRYDGTKAPAAHGYQVHVGPMYSNSRGHLKIKSKDPFVKPDFVFNYLSTEEDKREWVEAIKVARNILGQKALDPYNGGEISPGPEVQTDEEIIEWVKRDGETALHPSCSCRMGPASDEMS 487          
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA_RHIL3 (Choline dehydrogenase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=betA PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 4.360e-38
Identity = 89/230 (38.70%), Postives = 133/230 (57.83%), Query Frame = -1
Query:    9 SVRSLRFPAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARI-TPGFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMGVDE 695
            S  S   P ++ML+GIG    L+ +G  ++   PGVG  LQDH+    Q  + K  VS    L    +   GA+W+ +R GLGASN FE  AF R    ++  ++++ FLP V   Y GKA   + GFQ         SRGSV+  S DPKADP++R N+++   D E+ R  +R TRE+  Q ++ + RG E+ PG+ +QSD E++A++R++  + +H C TCRMG  +
Sbjct:  249 SASSFNSPKLLMLSGIGPGQHLQDMGIAVKADRPGVGANLQDHMEFYFQQVSTKP-VSLYSWLPWFWQGVAGAQWLLSRGGLGASNQFEACAFLRSAPGLKQPDIQYHFLP-VAISYDGKAAAKSHGFQVHVGYNLSKSRGSVSLRSADPKADPVLRFNYMSHAEDWEKFRHCVRLTREIFGQSAFHDYRGPEIQPGEGVQSDEEIDAFLREHLESAYHPCGTCRMGAKD 476          
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA_PSEFS (Choline dehydrogenase OS=Pseudomonas fluorescens (strain SBW25) GN=betA PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 4.360e-38
Identity = 83/224 (37.05%), Postives = 129/224 (57.59%), Query Frame = -1
Query:    3 PAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARITPGFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMGVDEMA 674
            P ++  +G+G    L+ L   + H  PGVG+ LQDH+ + +QY+   Q VS   +L    +  +GA W+   +G+GASN FE G F R   + ++ N+++ FLP+   +         GFQ     MR  SRG V   SK+P+  P I  N++    D ++ R+G+R TRE++ Q + D  RG E+SPG  +Q+D +L+ +IR++A T FH   +C+MG DEMA
Sbjct:  266 PQLLQRSGVGPAKLLESLDIPVVHDLPGVGENLQDHLELYLQYACT-QPVSLYPSLLWYNQPAIGAEWLFNGTGIGASNQFEAGGFIRSRPEFDWPNIQYHFLPVAINYNGSNGVKEHGFQAHMGSMRSPSRGRVQLKSKNPRDYPSILFNYMATEQDWQEFRDGIRLTREIMQQPALDPYRGREISPGIDVQTDEQLDKFIREHAETAFHPSCSCKMGTDEMA 488          
The following BLAST results are available for this feature:
BLAST of EY728614 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 128
Match NameE-valueIdentityDescription
BETA_STAAB1.957e-3838.36Choline dehydrogenase OS=Staphylococcus aureus (st... [more]
BETA_STAA91.957e-3838.36Choline dehydrogenase OS=Staphylococcus aureus (st... [more]
BETA_STAA81.957e-3838.36Choline dehydrogenase OS=Staphylococcus aureus (st... [more]
BETA_STAA31.957e-3838.36Choline dehydrogenase OS=Staphylococcus aureus (st... [more]
BETA_STAA21.957e-3838.36Choline dehydrogenase OS=Staphylococcus aureus (st... [more]
BETA_STAA11.957e-3838.36Choline dehydrogenase OS=Staphylococcus aureus (st... [more]
BETA_RHIE62.556e-3838.26Choline dehydrogenase OS=Rhizobium etli (strain CI... [more]
BETA_STAS14.360e-3836.52Choline dehydrogenase OS=Staphylococcus saprophyti... [more]
BETA_RHIL34.360e-3838.70Choline dehydrogenase OS=Rhizobium leguminosarum b... [more]
BETA_PSEFS4.360e-3837.05Choline dehydrogenase OS=Pseudomonas fluorescens (... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-006-C05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728614 ID=EY728614; Name=EY728614; organism=Citrus sinensis; type=EST; length=782bp
ACCGCCATCTCGTCCACCCCCATGCGGCAGGTGGAACAGGCGTGGAAAGT
GGTGCCGGCGTTGTCGCGGATCCAGGCTTCCAGCTCGGCATCGCTCTGCA
GGTGCTTGCCGGGGCTGAGCTCCTCGCCGCGCAGTTCGTCCCAGGAGCGC
TGGGCGATCATTTCCCGGGTCTTGCGCAGGCCTTCGCGCAGTTGCTCCAG
GTCGCCCGGCGCGGTGAGGAAGTTCAGGCGGATCAGCGGATCGGCCTTGG
GATCCTTCGAGGCCANGGTGACGCTGCCACGACTGGCCGGGCGCATGACG
CTGGTGAAGTACTGGAAGCCCGGGGTGATGCGCGCCTTGCCGCGGTAGAA
CTCGCCCACCATGGGGAGAAATTCGTGCTCCAGGTTGGCGTACTCGACCT
GGTCGTTGCCACGGAAGAACGCCCCCACCTCGAAGTAGTTGGACGCCCCC
AGGCCACTGCGCGCGGCCATCCAGCGCGCCCCGACGAACAGCCGCCCGAG
CGGCGACAGCGCGCGGGTCGGCGACACACCCTGCTTGGGCGTCGAATACT
GGATCGCCACGGGCACGTGGTCCTGCAGGTNCTTGCCGACCCCGGGGCAG
TGGTGGCGCAGCTCNATGCCGAGGGGCTTGAGCTCGTCCGGATCACCGAT
GCCGGCGAGCATCACAACTGCCGGGAACCGGAGGGACCGGACTGAGGATC
CTTGCTTGGCGGCAGGATGGATTGTCCAGGCATTGACTTTGTATTTCACC
CTAACGCCTCCTTGCCGAAAAAACCACCCGCC
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