EY728595 | Citrus Genome Database

Overview


Name	EY728595
Unique Name	EY728595
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	916

Libraries


Library Name	Type
Sweet orange fruit, development stadium (5 of 6)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

BLAST of EY728595 vs. ExPASy Swiss-Prot
Match: KAD_SALTI (Adenylate kinase OS=Salmonella typhi GN=adk PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.499e-12
Identity = 40/117 (34.19%), Postives = 65/117 (55.56%), Query Frame = 1

Query:  274 KVTQCAKIVKNYGLTHLSAGELLRREIASNSEYGTTILNTIKEGKIVPSEVTVSLIQKEMESSDSKK-FLLDGCPRSEENRAAFERIMGAEPDIVLFFDCPQEEMVNRVLNRNEGAS 621
            K TQ   I++ YG+  +S G++LR  + S SE G    + +  GK+V  E+ ++L+++ +   D +  FLLDG PR+     A +   G   D VL FD P E +V+R++ R   A+
Sbjct:   13 KGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKE-AGIVVDYVLEFDVPDELIVDRIVGRRVHAA 128

HSP 2 Score: 20.7866 bits (42), Expect = 5.499e-12
Identity = 7/10 (70.00%), Postives = 9/10 (90.00%), Query Frame = 3

Query:  249 VLGGPGSGKG 278
            +LG PG+GKG
Sbjct:    5 LLGAPGAGKG 14

BLAST of EY728595 vs. ExPASy Swiss-Prot
Match: KAD_SALSV (Adenylate kinase OS=Salmonella schwarzengrund (strain CVM19633) GN=adk PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.499e-12
Identity = 40/117 (34.19%), Postives = 65/117 (55.56%), Query Frame = 1

Query:  274 KVTQCAKIVKNYGLTHLSAGELLRREIASNSEYGTTILNTIKEGKIVPSEVTVSLIQKEMESSDSKK-FLLDGCPRSEENRAAFERIMGAEPDIVLFFDCPQEEMVNRVLNRNEGAS 621
            K TQ   I++ YG+  +S G++LR  + S SE G    + +  GK+V  E+ ++L+++ +   D +  FLLDG PR+     A +   G   D VL FD P E +V+R++ R   A+
Sbjct:   13 KGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKE-AGIVVDYVLEFDVPDELIVDRIVGRRVHAA 128

HSP 2 Score: 20.7866 bits (42), Expect = 5.499e-12
Identity = 7/10 (70.00%), Postives = 9/10 (90.00%), Query Frame = 3

Query:  249 VLGGPGSGKG 278
            +LG PG+GKG
Sbjct:    5 LLGAPGAGKG 14

BLAST of EY728595 vs. ExPASy Swiss-Prot
Match: KAD_SALPK (Adenylate kinase OS=Salmonella paratyphi A (strain AKU_12601) GN=adk PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.499e-12
Identity = 40/117 (34.19%), Postives = 65/117 (55.56%), Query Frame = 1

Query:  274 KVTQCAKIVKNYGLTHLSAGELLRREIASNSEYGTTILNTIKEGKIVPSEVTVSLIQKEMESSDSKK-FLLDGCPRSEENRAAFERIMGAEPDIVLFFDCPQEEMVNRVLNRNEGAS 621
            K TQ   I++ YG+  +S G++LR  + S SE G    + +  GK+V  E+ ++L+++ +   D +  FLLDG PR+     A +   G   D VL FD P E +V+R++ R   A+
Sbjct:   13 KGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKE-AGIVVDYVLEFDVPDELIVDRIVGRRVHAA 128

HSP 2 Score: 20.7866 bits (42), Expect = 5.499e-12
Identity = 7/10 (70.00%), Postives = 9/10 (90.00%), Query Frame = 3

Query:  249 VLGGPGSGKG 278
            +LG PG+GKG
Sbjct:    5 LLGAPGAGKG 14

BLAST of EY728595 vs. ExPASy Swiss-Prot
Match: KAD_SALPC (Adenylate kinase OS=Salmonella paratyphi C (strain RKS4594) GN=adk PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.499e-12
Identity = 40/117 (34.19%), Postives = 65/117 (55.56%), Query Frame = 1

Query:  274 KVTQCAKIVKNYGLTHLSAGELLRREIASNSEYGTTILNTIKEGKIVPSEVTVSLIQKEMESSDSKK-FLLDGCPRSEENRAAFERIMGAEPDIVLFFDCPQEEMVNRVLNRNEGAS 621
            K TQ   I++ YG+  +S G++LR  + S SE G    + +  GK+V  E+ ++L+++ +   D +  FLLDG PR+     A +   G   D VL FD P E +V+R++ R   A+
Sbjct:   13 KGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKE-AGIVVDYVLEFDVPDELIVDRIVGRRVHAA 128

HSP 2 Score: 20.7866 bits (42), Expect = 5.499e-12
Identity = 7/10 (70.00%), Postives = 9/10 (90.00%), Query Frame = 3

Query:  249 VLGGPGSGKG 278
            +LG PG+GKG
Sbjct:    5 LLGAPGAGKG 14

BLAST of EY728595 vs. ExPASy Swiss-Prot
Match: KAD_SALPA (Adenylate kinase OS=Salmonella paratyphi A GN=adk PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.499e-12
Identity = 40/117 (34.19%), Postives = 65/117 (55.56%), Query Frame = 1

Query:  274 KVTQCAKIVKNYGLTHLSAGELLRREIASNSEYGTTILNTIKEGKIVPSEVTVSLIQKEMESSDSKK-FLLDGCPRSEENRAAFERIMGAEPDIVLFFDCPQEEMVNRVLNRNEGAS 621
            K TQ   I++ YG+  +S G++LR  + S SE G    + +  GK+V  E+ ++L+++ +   D +  FLLDG PR+     A +   G   D VL FD P E +V+R++ R   A+
Sbjct:   13 KGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKE-AGIVVDYVLEFDVPDELIVDRIVGRRVHAA 128

HSP 2 Score: 20.7866 bits (42), Expect = 5.499e-12
Identity = 7/10 (70.00%), Postives = 9/10 (90.00%), Query Frame = 3

Query:  249 VLGGPGSGKG 278
            +LG PG+GKG
Sbjct:    5 LLGAPGAGKG 14

BLAST of EY728595 vs. ExPASy Swiss-Prot
Match: KAD_SALNS (Adenylate kinase OS=Salmonella newport (strain SL254) GN=adk PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.499e-12
Identity = 40/117 (34.19%), Postives = 65/117 (55.56%), Query Frame = 1

Query:  274 KVTQCAKIVKNYGLTHLSAGELLRREIASNSEYGTTILNTIKEGKIVPSEVTVSLIQKEMESSDSKK-FLLDGCPRSEENRAAFERIMGAEPDIVLFFDCPQEEMVNRVLNRNEGAS 621
            K TQ   I++ YG+  +S G++LR  + S SE G    + +  GK+V  E+ ++L+++ +   D +  FLLDG PR+     A +   G   D VL FD P E +V+R++ R   A+
Sbjct:   13 KGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKE-AGIVVDYVLEFDVPDELIVDRIVGRRVHAA 128

HSP 2 Score: 20.7866 bits (42), Expect = 5.499e-12
Identity = 7/10 (70.00%), Postives = 9/10 (90.00%), Query Frame = 3

Query:  249 VLGGPGSGKG 278
            +LG PG+GKG
Sbjct:    5 LLGAPGAGKG 14

BLAST of EY728595 vs. ExPASy Swiss-Prot
Match: KAD_SALHS (Adenylate kinase OS=Salmonella heidelberg (strain SL476) GN=adk PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.499e-12
Identity = 40/117 (34.19%), Postives = 65/117 (55.56%), Query Frame = 1

Query:  274 KVTQCAKIVKNYGLTHLSAGELLRREIASNSEYGTTILNTIKEGKIVPSEVTVSLIQKEMESSDSKK-FLLDGCPRSEENRAAFERIMGAEPDIVLFFDCPQEEMVNRVLNRNEGAS 621
            K TQ   I++ YG+  +S G++LR  + S SE G    + +  GK+V  E+ ++L+++ +   D +  FLLDG PR+     A +   G   D VL FD P E +V+R++ R   A+
Sbjct:   13 KGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKE-AGIVVDYVLEFDVPDELIVDRIVGRRVHAA 128

HSP 2 Score: 20.7866 bits (42), Expect = 5.499e-12
Identity = 7/10 (70.00%), Postives = 9/10 (90.00%), Query Frame = 3

Query:  249 VLGGPGSGKG 278
            +LG PG+GKG
Sbjct:    5 LLGAPGAGKG 14

BLAST of EY728595 vs. ExPASy Swiss-Prot
Match: KAD_SALG2 (Adenylate kinase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=adk PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.499e-12
Identity = 40/117 (34.19%), Postives = 65/117 (55.56%), Query Frame = 1

Query:  274 KVTQCAKIVKNYGLTHLSAGELLRREIASNSEYGTTILNTIKEGKIVPSEVTVSLIQKEMESSDSKK-FLLDGCPRSEENRAAFERIMGAEPDIVLFFDCPQEEMVNRVLNRNEGAS 621
            K TQ   I++ YG+  +S G++LR  + S SE G    + +  GK+V  E+ ++L+++ +   D +  FLLDG PR+     A +   G   D VL FD P E +V+R++ R   A+
Sbjct:   13 KGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKE-AGIVVDYVLEFDVPDELIVDRIVGRRVHAA 128

HSP 2 Score: 20.7866 bits (42), Expect = 5.499e-12
Identity = 7/10 (70.00%), Postives = 9/10 (90.00%), Query Frame = 3

Query:  249 VLGGPGSGKG 278
            +LG PG+GKG
Sbjct:    5 LLGAPGAGKG 14

BLAST of EY728595 vs. ExPASy Swiss-Prot
Match: KAD_SALEP (Adenylate kinase OS=Salmonella enteritidis PT4 (strain P125109) GN=adk PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.499e-12
Identity = 40/117 (34.19%), Postives = 65/117 (55.56%), Query Frame = 1

Query:  274 KVTQCAKIVKNYGLTHLSAGELLRREIASNSEYGTTILNTIKEGKIVPSEVTVSLIQKEMESSDSKK-FLLDGCPRSEENRAAFERIMGAEPDIVLFFDCPQEEMVNRVLNRNEGAS 621
            K TQ   I++ YG+  +S G++LR  + S SE G    + +  GK+V  E+ ++L+++ +   D +  FLLDG PR+     A +   G   D VL FD P E +V+R++ R   A+
Sbjct:   13 KGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKE-AGIVVDYVLEFDVPDELIVDRIVGRRVHAA 128

HSP 2 Score: 20.7866 bits (42), Expect = 5.499e-12
Identity = 7/10 (70.00%), Postives = 9/10 (90.00%), Query Frame = 3

Query:  249 VLGGPGSGKG 278
            +LG PG+GKG
Sbjct:    5 LLGAPGAGKG 14

BLAST of EY728595 vs. ExPASy Swiss-Prot
Match: KAD_SALDC (Adenylate kinase OS=Salmonella dublin (strain CT_02021853) GN=adk PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.499e-12
Identity = 40/117 (34.19%), Postives = 65/117 (55.56%), Query Frame = 1

Query:  274 KVTQCAKIVKNYGLTHLSAGELLRREIASNSEYGTTILNTIKEGKIVPSEVTVSLIQKEMESSDSKK-FLLDGCPRSEENRAAFERIMGAEPDIVLFFDCPQEEMVNRVLNRNEGAS 621
            K TQ   I++ YG+  +S G++LR  + S SE G    + +  GK+V  E+ ++L+++ +   D +  FLLDG PR+     A +   G   D VL FD P E +V+R++ R   A+
Sbjct:   13 KGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKE-AGIVVDYVLEFDVPDELIVDRIVGRRVHAA 128

HSP 2 Score: 20.7866 bits (42), Expect = 5.499e-12
Identity = 7/10 (70.00%), Postives = 9/10 (90.00%), Query Frame = 3

Query:  249 VLGGPGSGKG 278
            +LG PG+GKG
Sbjct:    5 LLGAPGAGKG 14

The following BLAST results are available for this feature:

BLAST of EY728595 vs. ExPASy Swiss-Prot

BLAST of EY728595 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 200


Match Name	E-value	Identity	Description
KAD_SALTI	5.499e-12	34.19	Adenylate kinase OS=Salmonella typhi GN=adk PE=3 S...	[more]
KAD_SALSV	5.499e-12	34.19	Adenylate kinase OS=Salmonella schwarzengrund (str...	[more]
KAD_SALPK	5.499e-12	34.19	Adenylate kinase OS=Salmonella paratyphi A (strain...	[more]
KAD_SALPC	5.499e-12	34.19	Adenylate kinase OS=Salmonella paratyphi C (strain...	[more]
KAD_SALPA	5.499e-12	34.19	Adenylate kinase OS=Salmonella paratyphi A GN=adk ...	[more]
KAD_SALNS	5.499e-12	34.19	Adenylate kinase OS=Salmonella newport (strain SL2...	[more]
KAD_SALHS	5.499e-12	34.19	Adenylate kinase OS=Salmonella heidelberg (strain ...	[more]
KAD_SALG2	5.499e-12	34.19	Adenylate kinase OS=Salmonella gallinarum (strain ...	[more]
KAD_SALEP	5.499e-12	34.19	Adenylate kinase OS=Salmonella enteritidis PT4 (st...	[more]
KAD_SALDC	5.499e-12	34.19	Adenylate kinase OS=Salmonella dublin (strain CT_0...	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C3-704-006-A01-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY728595 ID=EY728595; Name=EY728595; organism=Citrus sinensis; type=EST; length=916bp
CACGCGTCCGAAAAAAAAAATTATAGACCAGAAAATAACGTGAAATAACC
GAGTCAGAGTCAAAGAGACCGAACTGGAGAGAACCCATTACGATGTGGAG
GCGCGCGGCTTCGCTTTCTCCTTTCATCTCTTCCTCAGGATCATTGATTC
GCAATCATCAGACAGCTTACAACTTGAAGATTTGGGAATCATTTACCACG
GAAATACCCACCCAGGTTAAAGGAGGCAAGGGTCCATTCATATGTTTCGT
CTTAGGTGGCCCTGGTAGTGGAAAAGGTGACGCAATGTGCAAAAATTGTG
AAGAATTACGGATTGACACATCTAAGTGCGGGAGAGTTATTAAGGAGAGA
AATAGCTTCTAACAGTGAATATGGGACCACAATTCTCAACACAATCAAAG
AAGGAAAAATTGTCCCTTCAGAAGTAACAGTCAGCCTGATCCAAAAGGAG
ATGGAATCAAGTGATAGCAAAAAATTTCTACTTGATGGTTGTCCCCGAAG
TGAGGAGAATCGTGCAGCATTTGAACGGATTATGGGAGCAGAACCAGATA
TTGTGCTCTTCTTCGATTGCCCTCAAGAAGAGATGGTGAATCGAGTGCTG
AACCGGAACGAGGGTGCGAGTGATGATTACATTGACTCGGGCCGGAGACG
CGCCCAGTGTTTGGGCGTGGAGTCGTGCTGGTGTGCATTGCCATGCACTG
GTGGGGAAGGTTTGTGGGGTCGCGTGGGGGGCGCGCGGTGGTGGCGTGCT
GGGCCACGCCCTTGCACTCTCTTCGTGCGTTATGGTGGCGCGCGGTCGTC
CCGGGGATCTCGACGCGTGGGNTGGCGGGGCGCGCGGGGTTCGTGGAGGC
GGGGCGATGGGGGGGGTGGAGGGGCGCGTTGACGGGCGGTTGGGGAGGGG
GCGTGGTCGCACGGGT